Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
280 (321) |
| PWM (Da): |
30191.32 (33379.7) |
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| PI (pH): |
8.29 (5.09) |
Peptide Signal: |
cut: 30 range:30-350 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
QSSCPEGEKI VREIAWRKSE ADPTLGAKLL RLHFHNCFVQ GCDGSILLDS AGKNQSGKTV VPNLTVGGFD VIDDIKKAVE EVCPDTRSRA DIIALAARDA ISFPVK*NLL DWKLFSAKRT
EHKLAANVLG NIPSPFQDFN ALAxIFSKKG LNMNDLVVLS GSGAHSIGVA HCGTFSRRLY NFTGKGDTNP SLNATYAALL QNRCPNPTNL ATVVEMDPxQ SSLSFNNHCF DILMENKGLF
QSDVALSMNR DAAKVVQQLR MPATFFSEFG KSMKKMEAIT V
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Retrieve as FASTA
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| Remarks |
Pseudogene from genomic (5' end is missing, stops in frame). No prediction from Phytozome. No EST. join(14144914..14145033,14145119..14145333,14146398..14146542,14146705..14147064). |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAATCGAGTT GCCCTGAAGG TGAAAAGATC GTGAGGGAGA TCGCTTGGAG GAAATCTGAA GCTGACCCTA CGTTGGGTGC GAAGCTTCTC AGGCTTCACT TCCACAACTG TTTTGTGCAG
GTAACAAATC CCAATGTCCC GTAGATTCAA ATTTCTCTCA TTCACATTAA GGATTGATGA TATTGTGGCA ATAATCAAAT CTTCGGGTTG CGATGGGTCT ATACTGTTGG ACTCTGCGGG
GAAGAATCAG TCTGGGAAGA CCGTCGTCCC AAATCTCACG GTCGGTGGCT TTGATGTCAT TGATGACATC AAGAAAGCAG TGGAGGAAGT TTGCCCTGAC ACTAGGTCTC GTGCGGATAT
TATTGCTCTA GCCGCTCGCG ATGCCATCTC TTTTCCGGTA AAATAAAATC TGCTTGATTG GTTGTCTAAA ATATAATTTT CTTCACAAAA AATGGTCACC ATATGAAGTT AAACGTGTGG
TGTAAATTGC AGTTTAAGAA GCCAATGTGA GATGTACTGA CATGAAGAGA TGGCAACGTT AATGCTCCGT TCGTTTCACG GAAAATATCA TGTTTCCGGA AAACATTTTC CTGGAAGTTA
TTTTCTAGGA AAATGACTCT ATTTTCCGGT GTTCGGCCAA ATCTAAAATT TGAGTGGAAA ATATTTTCCA CTGTTCGTTA GCTCAAACAT TTTCCAGAAA AAAATTATCA AAAATTGAAT
TTTAATATTT TTAATTGACC AAAAAATTTA TTTTATTTAT TTATATTTTT TTAAATGATT TTTTTAAATT ATTTATATTT TTAAAATAGA AATTTTTATT AATTTTTTTT TCCTTCCTCC
TTCCTCCTCC TTCTTCCTCC CCATTCCGCC GCCGCCGCCT CCTTCCTGCC TGACGATGGT CGACTGCCTA GCGGCCGACC AAGACCCGGT GGCCACTCCG ACGAGCTCGA GGCTCGGCCG
ATCTCACCCG AGCTCGTCGG ATCTGGTGAC AGAGCTCGAG CTCGCCTGGA TCCGGCGAGC CGCGAGCTCC GCCGCCAGAT CCGGCGAGCT CGAGGCTCGG CCGATCTCAC CCGAGCTCGC
CGGATTTGGT GACAGATCTC CCCGCGAGCC TCCCGGCGCC GCCGCGGAGC TCCCTCTTGA GCCGGATCCT CCCGAGCGGC TTCGAGCCGC CGGGGAAGCG GAGCGCGGCG GTGGCGGCGG
CGCCCCGGCC GGAGCAGGCG GGCAGGAGCG GCCAGGGAGG GCGGAGGCTG GTCTCGGAGA AGGACGTCGT CGAAGCCGAC TTCGCAGCAA GGAGAGCAAG AGAGAGAGAA CAAGAACCGA
AGGAAGAGAA GAGGCGAGGC TTGGAAAATG TTTTCCTCTT TTGAAAAGAG GAAAACATTT TCCAAGCTGC AAAGAAGGAA TTTTCCGGTC AATGGAAAAT GTTTTCCGTT GACCGTGATT
TTCCGCTCAC CCGAACACCG GAAAATTCGG AAAATATTTT CCTGGAAGTT ATTTTCCGCA AAACGAACGG AGCATAAGTT AGCGGCCAAC GTGTTAGGGA ATATTCCATC TCCTTTCCAA
GACTTCAATG CCCTTGCACA nATTTTCTCA AAGAAAGGCC TCAATATGAA CGATCTCGTC GTTCTCTCAG GTAAACTAAC ATGACCTTTT TTCGGATTAT CGAGTTACAA TTTCATGACT
TATATTTGGA TTGTTAAATT AGCATTGAAG CTAATCAAAG TACATAACTT GACATATTGC CTTGAGTTAG ACATTGCACA ATATACTGAA ATCATCTACA TCTTTGTTCC TTGATCAGGT
GCACATTCCA TTGGAGTTGC TCATTGTGGC ACATTTTCTA GGAGGCTCTA CAACTTCACT GGGAAAGGGG ACACAAACCC CTCTCTGAAC GCCACCTACG CTGCATTGCT CCAGAATCGG
TGCCCTAACC CTACCAACCT GGCTACGGTG GTGGAAATGG ATCCACnnCA AAGCTCACTC TCCTTCAATA ACCATTGCTT CGATATTCTC ATGGAAAACA AGGGATTGTT CCAATCCGAC
GTCGCACTCT CGATGAATCG AGACGCAGCT AAGGTGGTGC AGCAGCTTCG GATGCCGGCC ACGTTTTTCT CCGAGTTTGG CAAGTCGATG AAGAAGATGG AGGCAATAAC CGTC
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAATCGAGTT GCCCTGAAGG TGAAAAGATC GTGAGGGAGA TCGCTTGGAG GAAATCTGAA GCTGACCCTA CGTTGGGTGC GAAGCTTCTC AGGCTTCACT TCCACAACTG TTTTGTGCAG
GGTTGCGATG GGTCTATACT GTTGGACTCT GCGGGGAAGA ATCAGTCTGG GAAGACCGTC GTCCCAAATC TCACGGTCGG TGGCTTTGAT GTCATTGATG ACATCAAGAA AGCAGTGGAG
GAAGTTTGCC CTGACACTAG GTCTCGTGCG GATATTATTG CTCTAGCCGC TCGCGATGCC ATCTCTTTTC CGGTAAAATA AAATCTGCTT GATTGGAAGT TATTTTCCGC AAAACGAACG
GAGCATAAGT TAGCGGCCAA CGTGTTAGGG AATATTCCAT CTCCTTTCCA AGACTTCAAT GCCCTTGCAC AnATTTTCTC AAAGAAAGGC CTCAATATGA ACGATCTCGT CGTTCTCTCA
GGATCAGGTG CACATTCCAT TGGAGTTGCT CATTGTGGCA CATTTTCTAG GAGGCTCTAC AACTTCACTG GGAAAGGGGA CACAAACCCC TCTCTGAACG CCACCTACGC TGCATTGCTC
CAGAATCGGT GCCCTAACCC TACCAACCTG GCTACGGTGG TGGAAATGGA TCCACnnCAA AGCTCACTCT CCTTCAATAA CCATTGCTTC GATATTCTCA TGGAAAACAA GGGATTGTTC
CAATCCGACG TCGCACTCTC GATGAATCGA GACGCAGCTA AGGTGGTGCA GCAGCTTCGG ATGCCGGCCA CGTTTTTCTC CGAGTTTGGC AAGTCGATGA AGAAGATGGA GGCAATAACC
GTC
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Retrieve as FASTA
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