Entry information : EgrPrx[P]173
Entry ID 10483
Creation 2012-02-08 (Qiang Li)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EgrPrx[P]173
Name EgrPrx[P]173
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]173
start..stop
S start..stop
EguPrx[P]173 187 3e-63 1..127 1..127
EglPrx[P]173 137 7e-44 56..121 1..66
EcamPrx[P]173 103 2e-30 6..57 1..52
GmPrx66 101 2e-27 1..127 182..308
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 43316418..43316798 381  
complement(join(43316418..43316798))


exon

Literature and cross-references EgrPrx[P]173
DNA ref. Phytozome 12:   scaffold_11 (43316798..43316418)
Protein sequence: EgrPrx[P]173
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   124
PWM (Da):   %s   13301.34  
PI (pH):   %s   7.96
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGGTFFTNRL YNFTGKGNTD PTLNSTYATY LMGECSTSDT TTTMAVDPGS SRSFDKALLP HST*KHGPLP IRCCSF*PTS EPPHSRPSCS DFN*FFTEFA QLMWRMGAVG VLGGGVGELR 
IDRSKIN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (large 5' end is missing, stops in frame). No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGCGGTGGCA CTTTTTTCAC CAATAGGCTC TACAATTTCA CTGGAAAGGG CAACACCGAC CCCACCCTCA ACTCCACCTA TGCCACCTAC TTAATGGGCG AGTGCAGCAC TTCCGACACG  ACCACCACCA TGGCCGTCGA CCCCGGTAGC TCCCGGAGCT TCGATAAGGC ACTACTGCCC CATTCTACTT AAAAGCATGG GCCTCTTCCA ATTCGATGCT GCTCTTTTTG ACCAACAAGC  GAGCCACCAC ATTCGCGTCC CAGTTGCTCG GACTTCAACT AGTTCTTCAC CGAATTTGCA CAGTTGATGT GGAGGATGGG CGCCGTCGGA GTGCTCGGGG GCGGTGTTGG AGAACTTAGA 
ATAGATCGTA GCAAGATCAA C 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGCGGTGGCA CTTTTTTCAC CAATAGGCTC TACAATTTCA CTGGAAAGGG CAACACCGAC CCCACCCTCA ACTCCACCTA TGCCACCTAC TTAATGGGCG AGTGCAGCAC TTCCGACACG  ACCACCACCA TGGCCGTCGA CCCCGGTAGC TCCCGGAGCT TCGATAAGGC ACTACTGCCC CATTCTACTT AAAAGCATGG GCCTCTTCCA ATTCGATGCT GCTCTTTTTG ACCAACAAGC  GAGCCACCAC ATTCGCGTCC CAGTTGCTCG GACTTCAACT AGTTCTTCAC CGAATTTGCA CAGTTGATGT GGAGGATGGG CGCCGTCGGA GTGCTCGGGG GCGGTGTTGG AGAACTTAGA 
ATAGATCGTA GCAAGATCAA C 

Retrieve as FASTA