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Entry information : EgrPrx[P]57
Entry ID 10510
Creation 2012-02-15 (Qiang Li)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-02-28 (Qiang Li)
Peroxidase information: EgrPrx[P]57
Name EgrPrx[P]57
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]57
start..stop		 S start..stop
EguPrx[P]57 387 8.22e-140 1..205 1..205
EglPrx[P]57 262 4.13e-91 1..205 1..150
EcamPrx[P]57 262 6.22e-91 1..153 1..164
EcamPrx176 198 1.88e-63 66..205 186..325
EcamPrx176 99 2.36e-25 3..75 63..132
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10510' 'complement(join(20368805..20368921,20368938..20369210,20370837..20371004,20371097..20371153))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20371097..20371153 55 N° 2 20370837..20371004 166 N° 3 20368938..20369210 271 N° 4 20368805..20368921 115
complement(join(20368805..20368921,20368938..20369210,20370837..20371004,2037109 7..20371153))


exon

Literature and cross-references EgrPrx[P]57
DNA ref. Phytozome 12:   scaffold_2 (20371153..20368805)
Protein sequence: EgrPrx[P]57
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   203 (177)
PWM (Da):   %s   22578.59 (19492.8)  
PI (pH):   %s   8.64 (7.96) Peptide Signal:   %s   cut: 31 range:27-203
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSRLH*ERTFIRRIISLLHSILLDLTANNKAEKAAVPNRSLTGFDVIDKIKEKLEKTCPLVVSCVDILILAARDSSGGHTIGVGHCNFFSNRLYNFTSKGDQDLSRDQDLSLDPTYASQLKAQRKTHSNNVTTLAMDPGSPLSFNSHYYTALNPN*GLFQSDTMLLLLDQDGFFTE
FRQLMKQRGALQVLMGSDGEIRKKCNVIN

Retrieve as FASTA  
Remarks Pseudogene from genomic (Stops in frame, Gaps in frame). No prediction from phytozome. No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTAGATTGCACTGAGAACGCACATTCATTAGAAGAATCATTTCATTGCTTCATATCATTGTCACATGGTCGTAGAAAGAGAGTTTCGCATGGTAATGTTTCATCGGTGTTTGATCG
GATCGCTTCATGTGTGTAGGGTTGCAAGCTCTCGATTTTGCTAGATTTGACGGCAAACAACAAGGCGGAGAAGGCGGCAGTTCCGAACCGGTCGCTAACTGGGTTTGATGTAATAGACAA
GATCAAGGAGAAGCTAGAGAAAACATGCCCCCTCGTCGTCTCTTGTGTTGACATCCTCATTTTAGCTGCTCGAGACTCTGGTCTCTATCCAAGTAAGACTTTTCGAGGCGATGAAAACTC
TTGGACCATTCATTGGCATTCTTTTGAGTGTGTTTCAACACTTTTGGAAGCTTTTCTTCTCGAGTTAGTAGAACTTTAGTAACCTCGTCGACCCTCCTCGACATGTGCTCTTGAACAAAA
CTATTGTGGAAAAAAGCTTTTTTGGAGCATTCCATGGCGACACTAGACTATCAAGCAAAAATTCATCTGTCTTCTTTGATACTATTTTCAACCGCACAAATACGTCAAAGTCAACCGTAT
TTTGATTCGTGATCAATCCATAGACAATAAAAACTACATAGGCATCATAACTTATCGGGAAAAATACAAAAAAAAAAATAAAATCATAAACCTATTGCATTGGTACAAATTCAATTATAA
ACTTTTTAATTGAACCAATTTAGTCTTAAACATTTCTACATTAGTACTAATTCAATCCATCTAACTAATTTAGCCCGGATAAATAATTAGACAAATGCAAAAACAACATCATTTTGCTAA
TGATGTGGATAAATAATTAATATAAAAATTAATTAAATTAAATTTAAAATGAAATTAAAAAGGAGAGGAAGAAGATGAACAGTTGAAGGCGGCTGAGAGCTCAACCCTCGCCACCGATGC
CTCCTTGAGATCACCAGGTTGGGCCGGGCTAACCCTTCCCCCACCGTCATCGGCCCTTCTCGATGACGGTGGGGAGTCAGTGGCGATGTGGGCGGAGCCCTCAACTGCCTCCAACTGTTC
ATCTTCTTGCTTCCTCTCTTTTTTTGAAAAAAGAATTCGTTTTATATTTAATTTAATGAATTTTTATATTAAAATTCAAATTCACGCCAAAATGACGTCGTTTTTGCATTTCTTTGCTAA
GTCAGCTTTCTAGTGAGTCACACAACCGAGCAAGATTAATAAAAATTACCACGTAAGATTTTCTGCGAGGTTCGTTGGAGGTGATATTTAAGTGTCACTTTCCACCTTACCAAATAAATT
TCACCTTACCAAAAGAAAAATGTGTCATTTTCTTAATTTTTGGCACTTAAGTGTCCCTTTATGCCAAATTTTAGTATTTGGACTATACTTTTGCTCACAATAATTTTATCAAGTTGTCTC
ACTAAAAAATATATAATGGAATATCTTTTTTTTTTTTTTTCCAAATAAACCAAAGTATAGCATTGAAGTCCGTGGTGAAATTATCCGCATTCTTTTTTATCTGGTGTAACGGAGTGTAAT
TACAAAGAATTCTTTTATTTAGTTACTTCACAAATAAGTTACTATCCTAATGATACGATCATTGTCAACTAATAACGGTGTAAGTCGGACCCCACTTTTTATATTATATAGGATGGGCAA
CTAGAGCACAGTATTCGTAATTTCAATATTTCCTATTTATATAGATTTTGGTTTCCCAATGAGAGAAACATAGCATGTTGACATTACAAGTGAAAAAAAAAAAAAACACTCCATCAAAAA
CACCCAAGCTTTCTCGACTTGAACAAGACACAGACTTGGACATTCACTTGACATTACGCGAGGACAAACTAACGACTAATCAAAATAAGAAGAGCAGTTGAATTAATTAGTTAATTAATT
AAGTATAAACTACATTTCTGGGTCATCTCAGGTGGGCACACAATTGGGGTCGGGCACTGCAACTTCTTCAGCAACCGGCTCTACAACTTTACCAGCAAAGGCGACCAAGACCTTTCCCGC
GACCAAGACCTTTCCCTCGACCCGACCTACGCCTCTCAATTGAAGGCCCAGCGCAAGACGCACTCCAATAACGTCACCACCCTCGCGATGGACCCCGGAAGCCCCCTCTCCTTCAACAGC
CACTACTACACAGCCTTGAACCCAAATTAGGGCCTCTTCCAATCCGACACCATGCTTCTGAGCGACAATCGACATGTTTTGCTGGACCAGGATGGCTTCTTCACCGAGTTCAGGCAGTTG
ATGAAGCAGAGGGGCGCACTTCAGGTGCTTATGGGGAGCGACGGCGAGATCCGGAAGAAATGTAATGTGATTAAC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTAGATTGCACTGAGAACGCACATTCATTAGAAGAATCATTTCATTGCTTCATTCGATTTTGCTAGATTTGACGGCAAACAACAAGGCGGAGAAGGCGGCAGTTCCGAACCGGTCG
CTAACTGGGTTTGATGTAATAGACAAGATCAAGGAGAAGCTAGAGAAAACATGCCCCCTCGTCGTCTCTTGTGTTGACATCCTCATTTTAGCTGCTCGAGACTCTTCAGGTGGGCACACA
ATTGGGGTCGGGCACTGCAACTTCTTCAGCAACCGGCTCTACAACTTTACCAGCAAAGGCGACCAAGACCTTTCCCGCGACCAAGACCTTTCCCTCGACCCGACCTACGCCTCTCAATTG
AAGGCCCAGCGCAAGACGCACTCCAATAACGTCACCACCCTCGCGATGGACCCCGGAAGCCCCCTCTCCTTCAACAGCCACTACTACACAGCCTTGAACCCAAATTAGGGCCTCTTCCAA
TCCGACACCATGCTTCTGTTGCTGGACCAGGATGGCTTCTTCACCGAGTTCAGGCAGTTGATGAAGCAGAGGGGCGCACTTCAGGTGCTTATGGGGAGCGACGGCGAGATCCGGAAGAAA
TGTAATGTGATTAAC

Retrieve as FASTA