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Entry information : HsubCIIBC02
Entry ID 10556
Creation 2012-02-27 (Christophe Dunand)
Last sequence changes 2012-02-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-28 (Christophe Dunand)
Peroxidase information: HsubCIIBC02
Name HsubCIIBC02
Class Other class II peroxidase type C    [Orthogroup: CIIBC001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Strophariaceae Hypholoma
Organism Hypholoma sublateritium    [TaxId: 71945 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HsubCIIBC02
start..stop		 S start..stop
HsubCIIBC03 603 0 1..358 1..359
GmarCIIBC06 584 0 1..354 1..354
HsubCIIBC04 578 0 1..358 1..358
HsubCIIBC01 576 0 1..358 1..360
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 98106..98232 125 N° 2 97852..98047 194 N° 3 97733..97798 64 N° 4 97406..97678 271
N° 5 97186..97352 165 N° 6 96884..97128 243  
complement(join(96884..97128,97186..97352,97406..97678,97733..97798,97852..98047 ,98106..98232))


exon

Literature and cross-references HsubCIIBC02
DNA ref. JGI genome:   scaffold_24 (98232..96884)
Cluster/Prediction ref. JGI gene:   86525
Protein sequence: HsubCIIBC02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (335)
PWM (Da):   %s   36972.5 (34726.3) Transmb domain:   %s   i9-28o
PI (pH):   %s   4.72 (4.62) Peptide Signal:   %s   cut: 23 range:23-357
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFARLSTVVALALSAATLSNAALTKRITCATGQTTANAACCPLFSAVEFLQTNLFDGGECGEEAHSALRLSFHDAIGFSIHGGKGGGADGSILAFNSTELEFHANGGIDDIVARQFPVF
EGLNLTAGDFVHLAAAVGTANCPGAPRLQFMFGRPPPVAPAPDLTVPEPTDSVTKILARFADAGFSPQEAVALLSSHTIAAADVVDPTIPGTPFDSTVGTFDSQVFLEVLLKGSLFPGNG
SQPGEVLSPLHGEMRLQSDFAISQDPRTACFWQDMINNQARMMSEFKAAMAKLQVLGQPRLIDCSDVVPVPAPFAGPIKFPASFSQKDVQVACHASAFPSIATVAGPAPTVAPVPGS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCGCCCGACTTTCGACAGTTGTCGCCCTCGCCCTGAGCGCAGCCACTCTTTCTAACGCGGCACTCACAAAGCGCATTACATGTGCCACAGGACAAACGACAGCTAACGCTGCT
TGCTGCCGTCAGTCTTAGTGTTAATTGACCTAGTTTTATATACTTACGCGTCACCAAAACTCAAGCACATTGTTTTCGGCGGTTGAATTCCTCCAGACCAACCTGTTTGATGGCGGTGAA
TGCGGCGAGGAAGCCCACTCTGCTCTTCGTCTGTCCTTCCACGATGCCATTGGTTTCTCCATTCACGGAGGAAAGGGTGGAGGAGCCGATGGATCCATCCTCGCTTTTAACTCCACTGAG
CTGGAATTCCATGCTAACGGAGGGTATGTGTTAAATTTTATGTGCGGTATTACATGCTAATTTATTTTGCACAAAGCACATCGACGATATCGTGGCGCGCCAATTCCCGGTATTTGAGGG
CCTCAATTTGACTGCGGGTGACTTGTGAGCAGTTCGGACGATAATGCTGCTATTCATGACGCTAATTCCACTTTTCAGTGTGTGCACCTCGCCGCGGCTGTCGGCACTGCTAACTGCCCG
GGTGCTCCTCGTCTCCAATTTATGTTTGGCCGCCCACCACCGGTCGCCCCTGCTCCTGATTTGACCGTCCCAGAGCCAACCGATAGCGTTACAAAGATCCTTGCACGTTTCGCAGACGCC
GGCTTCTCTCCTCAAGAAGCGGTTGCCTTGCTCTCTTCCCACACCATCGCTGCAGCGGACGTTGTCGACCCAACTATTCCTGGAACTCCCTTCGACTCTACTGTCGGAACCTTGTAAGGG
GTTATTGATGCACTGAAGACCAAAATTGATACCAATTATTCTTTAGCGCGATTCCCAAGTTTTCCTTGAGGTACTTCTCAAAGGTAGCCTGTTCCCCGGCAATGGCTCTCAGCCCGGCGA
GGTCCTCTCTCCTCTTCACGGAGAGATGCGTCTCCAGTCCGACTTTGCCATCTCGCAAGATCCTCGCACGGCCTGCTTCTGGCAAGACATGATCAGTATGCATACGTCATTCTATTGGTT
GTTCGAAATGCTCACCTTTATTACCTTCACAGACACAACCAGGCCCGCATGATGTCCGAGTTCAAGGCAGCAATGGCTAAGCTCCAAGTTCTCGGACAGCCCAGACTGATTGACTGCTCT
GACGTTGTCCCCGTCCCGGCACCGTTCGCTGGACCAATCAAATTCCCCGCAAGCTTCTCGCAGAAGGATGTCCAGGTTGCATGCCATGCTTCCGCCTTCCCCAGCATTGCTACTGTTGCT
GGGCCTGCTCCCACCGTCGCTCCCGTCCCAGGATCATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCGCCCGACTTTCGACAGTTGTCGCCCTCGCCCTGAGCGCAGCCACTCTTTCTAACGCGGCACTCACAAAGCGCATTACATGTGCCACAGGACAAACGACAGCTAACGCTGCT
TGCTGCCCATTGTTTTCGGCGGTTGAATTCCTCCAGACCAACCTGTTTGATGGCGGTGAATGCGGCGAGGAAGCCCACTCTGCTCTTCGTCTGTCCTTCCACGATGCCATTGGTTTCTCC
ATTCACGGAGGAAAGGGTGGAGGAGCCGATGGATCCATCCTCGCTTTTAACTCCACTGAGCTGGAATTCCATGCTAACGGAGGCATCGACGATATCGTGGCGCGCCAATTCCCGGTATTT
GAGGGCCTCAATTTGACTGCGGGTGACTTTGTGCACCTCGCCGCGGCTGTCGGCACTGCTAACTGCCCGGGTGCTCCTCGTCTCCAATTTATGTTTGGCCGCCCACCACCGGTCGCCCCT
GCTCCTGATTTGACCGTCCCAGAGCCAACCGATAGCGTTACAAAGATCCTTGCACGTTTCGCAGACGCCGGCTTCTCTCCTCAAGAAGCGGTTGCCTTGCTCTCTTCCCACACCATCGCT
GCAGCGGACGTTGTCGACCCAACTATTCCTGGAACTCCCTTCGACTCTACTGTCGGAACCTTCGATTCCCAAGTTTTCCTTGAGGTACTTCTCAAAGGTAGCCTGTTCCCCGGCAATGGC
TCTCAGCCCGGCGAGGTCCTCTCTCCTCTTCACGGAGAGATGCGTCTCCAGTCCGACTTTGCCATCTCGCAAGATCCTCGCACGGCCTGCTTCTGGCAAGACATGATCAACAACCAGGCC
CGCATGATGTCCGAGTTCAAGGCAGCAATGGCTAAGCTCCAAGTTCTCGGACAGCCCAGACTGATTGACTGCTCTGACGTTGTCCCCGTCCCGGCACCGTTCGCTGGACCAATCAAATTC
CCCGCAAGCTTCTCGCAGAAGGATGTCCAGGTTGCATGCCATGCTTCCGCCTTCCCCAGCATTGCTACTGTTGCTGGGCCTGCTCCCACCGTCGCTCCCGTCCCAGGATCATGA

Retrieve as FASTA