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Entry information : HsubCIIBC04
Entry ID 10562
Creation 2012-02-28 (Christophe Dunand)
Last sequence changes 2012-02-28 (Christophe Dunand)
Sequence status complete
Reviewer Nizar Fawal
Last annotation changes 2013-05-24 (Nizar Fawal)
Peroxidase information: HsubCIIBC04
Name HsubCIIBC04
Class Other class II peroxidase type C    [Orthogroup: CIIBC001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Strophariaceae Hypholoma
Organism Hypholoma sublateritium    [TaxId: 71945 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HsubCIIBC04
start..stop		 S start..stop
GmarCIIBC06 596 0 1..354 1..354
HsubCIIBC02 590 0 1..358 1..358
GmarCIIBC14 583 0 1..358 1..358
GmarCIIBC12 578 0 1..354 1..354
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10562' 'join(94073..94199,94260..94324,94379..94433,94494..94569,94627..94692,94752..95024,95081..95247,95300..95466,95526..95603)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 94073..94199 125 N° 2 94260..94324 63 N° 3 94379..94433 53 N° 4 94494..94569 74
N° 5 94627..94692 64 N° 6 94752..95024 271 N° 7 95081..95247 165 N° 8 95300..95466 165
N° 9 95526..95603 76  
join(94073..94199,94260..94324,94379..94433,94494..94569,94627..94692,94752..950 24,95081..95247,95300..95466,95526..95603)


exon

Literature and cross-references HsubCIIBC04
DNA ref. JGI genome:   scaffold_24 (94073..95603)
Cluster/Prediction ref. JGI gene:   184750
Protein sequence: HsubCIIBC04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (335)
PWM (Da):   %s   36986.56 (34687.3)  
PI (pH):   %s   4.77 (4.66) Peptide Signal:   %s   cut: 23 range:23-357
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVFARLSAIVSIALAASQLAQAGLTKRVTCASGQTTANAACCALFPIVDFIQTNLFDGGECGEEAHSALRLAFHDAIGFSIHGGKGGGADGSILAFNQTETAFHANGGIDDITDRQFDVW
QNTTLTAGDFVHLAAAIGTGNCPGAPRLQFAFGRPPPKAPAPDLTVPEPTDSVTAILARFADAGFSTPEVVALLASHTIAAADVVDPTIPGTPFDSTVGTFDTQVFLEVLLKGTLFPGNG
SQSGEVLSPIHGEMRLQSDFAISQDARTACLWQGFINNQNLMMSQFKAAMAKLQVLGQKNLIDCSDVVPVPATFPGPIKFPASFSQKDVQVACHQSAFPSLATVAGPAPTLAPVPGS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTCGCTCGTCTATCTGCCATTGTTTCGATCGCTCTTGCAGCGTCGCAGCTTGCTCAGGCCGGTCTCACCAAGCGCGTCACCTGTGCTTCCGGTCAGACCACCGCGAACGCGGCA
TGCTGCGCGGTATGCGTGCTTTCTATTTATATCAATTGACACGTTGATCCTGATACAATCCTACTATAGCTCTGTTCCCCATTGTAGACTTTATCCAAACCAACCTCTTCGATGGCGGTG
AGTGCGGGGAGGAGAGGTGAGTACGCGTATATAGATTGAACGTAACCTCTAACCTTTATCGCCTCATCAGGCCCACTCTGCGTTGCGTCTGGCTTTCCATGATGCCATCGGTTTCTCTAT
CCATGTGGTGAGATCGAGGTCATGTTCTCCAGTCGTCGTTACGGTCACTGACGCGTTTAACTGTTAGGTGGAAAGGGAGGAGGAGCTGACGGATCCATTCTCGCTTTCAATCAGACAGAA
ACGGCATTCCACGCAAATGGGGGGGGTGAGTTCCATGCTAAAATGCTTGTAACCTTGCAAATATCTGATATTGTATGGATAGCATCGACGATATCACCGATCGTCAATTTGATGTCTGGC
AGAACACTACCTTGACGGCTGGTGACTTTTGTAAGTGCAATTCTAATAGCCCGCCTACTAAGCACTGATCGTCATTCATTCACTGTCAGCGTACATCTGGCTGCTGCGATCGGTACAGGC
AATTGTCCTGGAGCTCCTCGCCTCCAATTTGCGTTTGGTCGCCCACCCCCGAAGGCACCTGCCCCTGACCTGACGGTCCCCGAGCCCACTGACAGCGTGACCGCAATCCTTGCCCGTTTT
GCTGACGCCGGCTTCTCTACTCCTGAAGTTGTCGCTCTTCTCGCTTCCCACACCATCGCTGCAGCCGACGTGGTCGACCCGACCATTCCGGGAACGCCTTTCGATTCTACCGTTGGAACT
TTTTGTGCGTACTTTATATTTCATTCTCAGCGATTCGGCCGTCATTGACAATATTTATAGTGATACTCAAGTCTTCCTTGAAGTTTTGCTCAAGGGGACTCTATTCCCAGGAAACGGATC
GCAGTCCGGAGAAGTTCTCTCACCCATTCATGGTGAAATGCGCCTGCAGAGCGACTTCGCCATTTCCCAAGATGCGAGAACCGCTTGTCTTTGGCAAGGATTTATCACAGTAAGTATAGT
TTTCGCCCATTCATATTCGCTCAACCACTCATACTTCACAGACAACCAGAATTTGATGATGTCGCAGTTCAAGGCGGCCATGGCCAAGCTTCAGGTCCTTGGACAGAAGAATCTGATTGA
CTGCTCAGATGTTGTCCCCGTTCCCGCAACATTCCCTGGACCGATCAAATTCCCTGCCAGTTTCTCGCAAAAAGACGTCCAAGTTGCCCCGTACGTGCTATTCCTTCGTCATGTTTGCCT
CATATATTCTAATTAACCGGTATACGCAGTGCCACCAGAGTGCCTTCCCCAGCCTTGCGACCGTCGCAGGCCCCGCTCCTACTCTCGCTCCTGTACCAGGCTCGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTCGCTCGTCTATCTGCCATTGTTTCGATCGCTCTTGCAGCGTCGCAGCTTGCTCAGGCCGGTCTCACCAAGCGCGTCACCTGTGCTTCCGGTCAGACCACCGCGAACGCGGCA
TGCTGCGCTCTGTTCCCCATTGTAGACTTTATCCAAACCAACCTCTTCGATGGCGGTGAGTGCGGGGAGGAGGCCCACTCTGCGTTGCGTCTGGCTTTCCATGATGCCATCGGTTTCTCT
ATCCATGGTGGAAAGGGAGGAGGAGCTGACGGATCCATTCTCGCTTTCAATCAGACAGAAACGGCATTCCACGCAAATGGGGGCATCGACGATATCACCGATCGTCAATTTGATGTCTGG
CAGAACACTACCTTGACGGCTGGTGACTTCGTACATCTGGCTGCTGCGATCGGTACAGGCAATTGTCCTGGAGCTCCTCGCCTCCAATTTGCGTTTGGTCGCCCACCCCCGAAGGCACCT
GCCCCTGACCTGACGGTCCCCGAGCCCACTGACAGCGTGACCGCAATCCTTGCCCGTTTTGCTGACGCCGGCTTCTCTACTCCTGAAGTTGTCGCTCTTCTCGCTTCCCACACCATCGCT
GCAGCCGACGTGGTCGACCCGACCATTCCGGGAACGCCTTTCGATTCTACCGTTGGAACTTTTGATACTCAAGTCTTCCTTGAAGTTTTGCTCAAGGGGACTCTATTCCCAGGAAACGGA
TCGCAGTCCGGAGAAGTTCTCTCACCCATTCATGGTGAAATGCGCCTGCAGAGCGACTTCGCCATTTCCCAAGATGCGAGAACCGCTTGTCTTTGGCAAGGATTTATCAACAACCAGAAT
TTGATGATGTCGCAGTTCAAGGCGGCCATGGCCAAGCTTCAGGTCCTTGGACAGAAGAATCTGATTGACTGCTCAGATGTTGTCCCCGTTCCCGCAACATTCCCTGGACCGATCAAATTC
CCTGCCAGTTTCTCGCAAAAAGACGTCCAAGTTGCCTGCCACCAGAGTGCCTTCCCCAGCCTTGCGACCGTCGCAGGCCCCGCTCCTACTCTCGCTCCTGTACCAGGCTCGTAA

Retrieve as FASTA