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Entry information : HanAPx-CcP02 (hpox2 / HanAPx-CcP02)
Entry ID 10570
Creation 2012-02-28 (Christophe Dunand)
Last sequence changes 2012-02-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-23 (Catherine Mathe (Scipio))
Peroxidase information: HanAPx-CcP02 (hpox2 / HanAPx-CcP02)
Name (synonym) HanAPx-CcP02 (hpox2 / HanAPx-CcP02)
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Bondarzewiaceae Heterobasidion
Organism Heterobasidion annosum (root rot fungus)    [TaxId: 13563 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HanAPx-CcP02
start..stop		 S start..stop
HanAPx-CcP01 779 0 1..537 2..537
HanAPx-CcP03 650 0 19..537 23..538
HC14APx-CcP03 394 4.03e-132 7..537 13..551
HC14APx-CcP02 386 5.24e-129 7..514 9..518
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10570' 'complement(join(250624..250890,250974..251265,251317..251363,251418..251715,251780..252110,252170..252324,252390..252610))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 252390..252610 219 N° 2 252170..252324 153 N° 3 251780..252110 329 N° 4 251418..251715 296
N° 5 251317..251363 45 N° 6 250974..251265 290 N° 7 250624..250890 265  
complement(join(250624..250890,250974..251265,251317..251363,251418..251715,2517 80..252110,252170..252324,252390..252610))


exon

Literature and cross-references HanAPx-CcP02 (hpox2 / HanAPx-CcP02)
DNA ref. JGI genome:   scaffold_05 (252610..250624)
Cluster/Prediction ref. JGI gene:   383689
Protein sequence: HanAPx-CcP02 (hpox2 / HanAPx-CcP02)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   536 (517)
PWM (Da):   %s   56557.91 (54534.9)  
PI (pH):   %s   4.26 (4.23) Peptide Signal:   %s   cut: 20 range:20-536
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRGTASLATFLSLSLLSNGYQWPSDPVFEALEEMYTLSDGLGSSGFVGGIEPCSFSPANNRTSGRQAAAEWVRTAYHDMATADVAAGTGGLDASISFETDRAENVGDAFNASFGFFVGFQ
NARVSMSDLIALGAVYAVRVCSGPIIPFRAGRIDATEAGPKGVPEPQQDLASHTASFAKQGFNVSEMIGLVACGHTLGGVHEEDFPTIVYGETNSDNNTSGMQHFDDSFDEFDNRVAVQW
VNSSLSTNALATGFNSTTNSDGRIFAADGNATMRDLASSNTLFQSRCAELLARMIDTVPKGVQLTDVITPIAIKPWNVQLSINDNGQLHLGGYVRLFTSNKSASTSDYEVNVTWTDHNGA
ACEGCSTTTSAQGFPGTIFSGTVMMFNFDTTIDPKVGFSAFSVEYTSTPGGPVTKADNGGAGFPFSDVVMLQSSASCTSDGTIKAVAAVRNDQPITAVYIDYTSAETQPGTVMLKMVPSS
INMTASSNSSASSLYTLYNAEFKVDNAGSSSFNIFAEVGGKVYTDDFKRPNGLNSC*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGGGCACAGCGTCTCTCGCCACTTTCCTATCTCTTTCACTCCTCTCGAACGGATATCAATGGCCCAGTGATCCCGTCTTTGAGGCCCTTGAGGAGATGTACACCCTGAGCGATGGC
CTGGGCTCGTCTGGTTTCGTTGGAGGCATTGAACCGTGCAGCTTTTCGCCGGCGAATAATCGCACAAGCGGAAGGCAGGCTGCCGCCGAGTGGGTTCGAACGTGAGCTACAGTATCCCGT
GGGTGATCGCAGTGAGCTGACCAGTCGGTTGCCCTCGGGCGTGTAGGGGGCATACCACGATATGGCCACGGCGGATGTTGCAGCTGGCACCGGTGGGCTCGACGCGTCGATCAGCTTCGA
GACCGATCGCGCGGAGAATGTAGGCGACGCATTCAACGCCAGTTTCGGTTTCTTCGTCGGCTTCCAGAATGCCCGCGTCTCCAGTGAGTTCCTTGTTTGCTGGCGAAAGAAGAACGCAGG
GATTGATCTCGATGCACTCTAGTGTGTCCGACCTCATTGCCCTCGGTGCGGTCTACGCCGTTCGTGTTTGTTCCGGCCCCATAATTCCCTTCCGCGCTGGTCGCATTGACGCTACGGAAG
CTGGCCCCAAGGGAGTTCCCGAGCCGCAACAGGATCTCGCATCGCACACCGCGTCGTTCGCGAAACAGGGCTTCAACGTGAGCGAGATGATCGGTCTCGTGGCGTGCGGGCACACGCTTG
GTGGCGTCCACGAAGAGGACTTCCCCACGATCGTGTATGGAGAGACGAACTCGGACAACAACACGAGCGGGATGCAGCACTTCGACGACTCATTCGACGAGTTTGACAACCGCGTGTGCG
TGGGTTCTTCCATTGAGGCCACATGCCTGAGATGCTGATAGGCGTTTACTCCCCGATAGCGCGCTGTGCAATGGGTGAACAGCAGCTTATCTACCAACGCGCTCGCGACTGGCTTTAACA
GCACGACCAACTCCGACGGGCGAATCTTCGCCGCCGACGGCAACGCTACCATGCGTGACCTCGCCTCCAGCAACACCCTCTTCCAAAGCCGCTGTGCCGAGCTTCTTGCACGGATGATCG
ACACCGTCCCGAAGGGCGTCCAGCTGACAGACGTCATCACTCCTATAGCCATCAAGCCTTGGAACGTCCAATTGAGCATCAACGACAACGGGCAGCTGCATCTCGGGGGCTATGTCCGCG
TACGTGTATTCCTTTGCCGTCGAGGATGGCTTTTGACTGACGCATCTATGCAGTTTTATTCACTTCCAACAAATCTGCGTCCACTTCCGACTACGAGGTCAAGTGAGTCGTTTGCACCGA
TGTCGTCGCTGAAGTCCTGATTTTCTATTGCAGCGCGTCACCTGGACCGATCACAACGGCGCTGCTTGTGAGGGGTGCAGCACAACCACGAGCGCACAAGGGTTCCCGGGCACTATCTTC
TCGGGCACGGTCATGATGTTCAACTTTGACACCACCATCGACCCCAAGGTCGGGTTCTCCGCCTTCAGCGTCGAGTACACGAGCACGCCGGGGGGGCCCGTGACCAAGGCCGACAACGGC
GGTGCCGGCTTCCCTTTTAGCGACGTCGTCATGCTGCAGTCGTCAGCATCCTGCACTTCCGACGGCACGATCAAAGCTGTCGCCGCGGTACGTCCTTTCTCTTCTCTTCTCTTCTCTTTT
AGGCTTGTCCTTATGTGTGTGTGCTCATCGTCGATCGTTCTCTCGACCAGGTGTTCGCAACGACCAGCCCATCACGGCAGTCTACATCGACTATACCTCCGCCGAGACGCAGCCCGGAAC
TGTCATGCTTAAGATGGTCCCGTCCTCCATCAACATGACGGCGAGCAGCAACTCTTCCGCGTCGAGCCTGTACACCCTGTACAACGCCGAGTTCAAGGTGGACAATGCGGGGAGCTCCTC
GTTCAACATCTTCGCCGAGGTGGGAGGGAAGGTCTATACTGATGACTTCAAGCGGCCGAACGGGCTTAACAGCTGCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGGGCACAGCGTCTCTCGCCACTTTCCTATCTCTTTCACTCCTCTCGAACGGATATCAATGGCCCAGTGATCCCGTCTTTGAGGCCCTTGAGGAGATGTACACCCTGAGCGATGGC
CTGGGCTCGTCTGGTTTCGTTGGAGGCATTGAACCGTGCAGCTTTTCGCCGGCGAATAATCGCACAAGCGGAAGGCAGGCTGCCGCCGAGTGGGTTCGAACGGCATACCACGATATGGCC
ACGGCGGATGTTGCAGCTGGCACCGGTGGGCTCGACGCGTCGATCAGCTTCGAGACCGATCGCGCGGAGAATGTAGGCGACGCATTCAACGCCAGTTTCGGTTTCTTCGTCGGCTTCCAG
AATGCCCGCGTCTCCATGTCCGACCTCATTGCCCTCGGTGCGGTCTACGCCGTTCGTGTTTGTTCCGGCCCCATAATTCCCTTCCGCGCTGGTCGCATTGACGCTACGGAAGCTGGCCCC
AAGGGAGTTCCCGAGCCGCAACAGGATCTCGCATCGCACACCGCGTCGTTCGCGAAACAGGGCTTCAACGTGAGCGAGATGATCGGTCTCGTGGCGTGCGGGCACACGCTTGGTGGCGTC
CACGAAGAGGACTTCCCCACGATCGTGTATGGAGAGACGAACTCGGACAACAACACGAGCGGGATGCAGCACTTCGACGACTCATTCGACGAGTTTGACAACCGCGTCGCTGTGCAATGG
GTGAACAGCAGCTTATCTACCAACGCGCTCGCGACTGGCTTTAACAGCACGACCAACTCCGACGGGCGAATCTTCGCCGCCGACGGCAACGCTACCATGCGTGACCTCGCCTCCAGCAAC
ACCCTCTTCCAAAGCCGCTGTGCCGAGCTTCTTGCACGGATGATCGACACCGTCCCGAAGGGCGTCCAGCTGACAGACGTCATCACTCCTATAGCCATCAAGCCTTGGAACGTCCAATTG
AGCATCAACGACAACGGGCAGCTGCATCTCGGGGGCTATGTCCGCTTATTCACTTCCAACAAATCTGCGTCCACTTCCGACTACGAGGTCAACGTCACCTGGACCGATCACAACGGCGCT
GCTTGTGAGGGGTGCAGCACAACCACGAGCGCACAAGGGTTCCCGGGCACTATCTTCTCGGGCACGGTCATGATGTTCAACTTTGACACCACCATCGACCCCAAGGTCGGGTTCTCCGCC
TTCAGCGTCGAGTACACGAGCACGCCGGGGGGGCCCGTGACCAAGGCCGACAACGGCGGTGCCGGCTTCCCTTTTAGCGACGTCGTCATGCTGCAGTCGTCAGCATCCTGCACTTCCGAC
GGCACGATCAAAGCTGTCGCCGCGGTTCGCAACGACCAGCCCATCACGGCAGTCTACATCGACTATACCTCCGCCGAGACGCAGCCCGGAACTGTCATGCTTAAGATGGTCCCGTCCTCC
ATCAACATGACGGCGAGCAGCAACTCTTCCGCGTCGAGCCTGTACACCCTGTACAACGCCGAGTTCAAGGTGGACAATGCGGGGAGCTCCTCGTTCAACATCTTCGCCGAGGTGGGAGGG
AAGGTCTATACTGATGACTTCAAGCGGCCGAACGGGCTTAACAGCTGCTAG

Retrieve as FASTA