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Entry information : HanAPx-CcP03
Entry ID 10573
Creation 2012-02-28 (Christophe Dunand)
Last sequence changes 2012-02-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-23 (Catherine Mathe (Scipio))
Peroxidase information: HanAPx-CcP03
Name HanAPx-CcP03
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Bondarzewiaceae Heterobasidion
Organism Heterobasidion annosum (root rot fungus)    [TaxId: 13563 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HanAPx-CcP03
start..stop		 S start..stop
HanAPx-CcP02 675 0 12..538 8..537
HanAPx-CcP01 662 0 15..538 12..537
HC14APx-CcP03 371 5.39e-123 24..538 26..551
LfluAPx-CcP01 357 1.65e-117 3..471 1..489
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10573' 'complement(join(2009241..2009504,2009561..2009858,2009932..2009978,2010045..2010342,2010410..2010740,2010805..2010959,2011022..2011242))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2011022..2011242 219 N° 2 2010805..2010959 153 N° 3 2010410..2010740 329 N° 4 2010045..2010342 296
N° 5 2009932..2009978 45 N° 6 2009561..2009858 296 N° 7 2009241..2009504 262  
complement(join(2009241..2009504,2009561..2009858,2009932..2009978,2010045..2010 342,2010410..2010740,2010805..2010959,2011022..2011242))


exon

Literature and cross-references HanAPx-CcP03
DNA ref. JGI genome:   scaffold_06 (2011242..2009241)
Cluster/Prediction ref. JGI gene:   150650
Protein sequence: HanAPx-CcP03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   537 (514)
PWM (Da):   %s   56010.9 (53457.6)  
PI (pH):   %s   4.17 (4.11) Peptide Signal:   %s   cut: 24 range:24-537
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRVQSHIAYLAASLLSLPLLSEGYQWPDPIDAIEELYSVTDGLGASNVVFPITPCGFSPLSTSGRQAAAEWIRTAYHDMATADAAAGTGGIDASLGFETDRGENVGPAFNTTMGFLATFQ
NSHASLADLIALGTVLSVRICSGPSVPMRVGRVDATSAGPFGVPEPQQDLSSHTASFAKQGFNVSEMIGLVACGHTIGGVHETEFPTVVTGLINSDNNTSGMQHFDDSFSKFDNHIAVQW
VNSSTSDDALATGFNTTMDSDARIFAADNNATMRDLASSNDVFNNRCGELLGRMLDTVPKGVTLTDPIAPVPVKPWNAQLSIDSNGNIQLEGNVRIFSSDPAETFDGYTVNIAWTDRNGA
SCDGCTAPATFQGTSSGTIWDGAVRFFHFNTTIDPAVGFSAFTVQFSTTAGGVVTTADNNGAGFAISDGVMVQPATSCVMSDGTVNIVAAVRNDQTVSSASVSFTSAETQVGSVGRLMVP
STASLTRTTSSASSLYDLYSSQFVVGIAASSSFDLSVDLGGTTHTDAFNLVKNLNSC*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGGTGCAGAGTCACATAGCATACCTTGCCGCGAGCCTTTTGTCGCTTCCCCTCCTCTCAGAAGGGTATCAATGGCCTGACCCGATTGATGCTATCGAAGAGCTGTACTCTGTCACT
GACGGTCTTGGAGCCAGCAATGTCGTGTTCCCGATCACGCCGTGCGGCTTCTCCCCACTCAGCACCAGTGGCAGGCAGGCCGCTGCTGAATGGATTCGAACGTGAGCATCGTGGTCTCCA
CATCGTCCGACAGGCATCTTCGCCGACTGACAACCGCCCGTAGCGCGCATATCACGACATGGCTACGGCAGACGCAGCTGCGGGCACTGGTGGAATCGACGCCTCTCTCGGTTTCGAGAC
GGATCGTGGAGAAAACGTCGGCCCCGCCTTCAACACCACCATGGGCTTCCTCGCTACGTTCCAGAATAGCCACGCATCGTGTTGGTTTCATTTTTCTGTTCCGTCATCTGCTGCCCGTTT
ACTCATGCTCGAGCAATTTCTTAGTGTGGCCGATCTCATTGCTCTCGGCACGGTTCTCTCTGTCCGTATCTGCTCCGGCCCCTCTGTTCCCATGCGCGTTGGTCGCGTCGATGCCACTAG
CGCCGGTCCCTTTGGTGTCCCCGAGCCCCAGCAGGATCTCTCGTCGCACACGGCGTCGTTCGCGAAGCAAGGTTTCAACGTCAGCGAGATGATCGGTCTCGTAGCGTGCGGGCACACGAT
TGGCGGTGTCCACGAGACAGAATTCCCGACCGTCGTCACCGGATTGATCAACTCTGACAACAACACGAGCGGGATGCAGCATTTCGATGACTCGTTCTCGAAGTTTGATAACCACATGTA
CGCTTGTGACCGCTCGTCTCCCCACGCAACGATTCTGACTTAACCTTTGTACGTATGACCACAGCGCGCGGTGCAGTGGGTCAACAGCAGCACTTCCGACGACGCACTCGCCACCGGTTT
CAACACCACGATGGATTCTGACGCACGCATCTTCGCCGCCGACAACAACGCGACCATGCGCGACCTCGCCTCCAGCAACGACGTCTTCAACAACCGCTGCGGAGAACTCCTCGGGCGCAT
GCTCGACACCGTCCCCAAGGGCGTGACGCTGACCGACCCCATCGCCCCCGTCCCCGTCAAGCCGTGGAACGCGCAGTTGAGCATCGACAGCAACGGGAATATCCAGTTGGAAGGTAACGT
CCGGGTGCGTAGGGCTTTATTATTCTTTCGGAAGCGCGACTCCGGCGCTCACGCGTACTGCGCATTCTAGATATCTTCTCTTCGGACCCTGCGGAGACCTTCGATGGCTACACGGTCAAG
TAAGTTCTTCCAGGACCGCAGTGTCTTTACGAGCGGAATGTCTGACTTCTTTCCTCTTCTTCTCTCGATCAGCACATCGCCTGGACAGACCGCAACGGCGCGTCGTGCGACGGCTGCACC
GCACCCGCGACGTTCCAAGGGACTTCTAGCGGCACGATCTGGGACGGCGCGGTCCGGTTCTTCCACTTCAACACCACGATCGACCCCGCCGTCGGCTTCTCCGCCTTCACGGTCCAGTTC
TCGACCACCGCCGGGGGCGTGGTGACCACAGCAGACAACAACGGCGCGGGCTTCGCGATCAGCGATGGCGTCATGGTGCAGCCCGCGACCAGCTGTGTCATGTCTGACGGCACCGTCAAT
ATCGTCGCTGCGGTAAGCATTTCTCATCCTTCCCCCCTGCGAACTAGTGCTTATCGTCCGGGCGACAGGTGTGCGCAACGACCAGACGGTCTCGTCCGCGTCAGTCAGCTTCACCTCCGC
CGAGACGCAGGTGGGCTCGGTCGGCCGTCTGATGGTGCCGTCGACGGCGAGCCTGACGCGGACCACGAGCTCCGCGTCGAGCCTGTACGACCTGTACTCCTCGCAGTTCGTCGTTGGGAT
CGCCGCCAGCTCGTCGTTCGACCTCTCTGTCGACCTCGGGGGCACGACGCACACGGACGCGTTCAACCTTGTGAAGAACCTCAACAGCTGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGGTGCAGAGTCACATAGCATACCTTGCCGCGAGCCTTTTGTCGCTTCCCCTCCTCTCAGAAGGGTATCAATGGCCTGACCCGATTGATGCTATCGAAGAGCTGTACTCTGTCACT
GACGGTCTTGGAGCCAGCAATGTCGTGTTCCCGATCACGCCGTGCGGCTTCTCCCCACTCAGCACCAGTGGCAGGCAGGCCGCTGCTGAATGGATTCGAACCGCATATCACGACATGGCT
ACGGCAGACGCAGCTGCGGGCACTGGTGGAATCGACGCCTCTCTCGGTTTCGAGACGGATCGTGGAGAAAACGTCGGCCCCGCCTTCAACACCACCATGGGCTTCCTCGCTACGTTCCAG
AATAGCCACGCATCGTTGGCCGATCTCATTGCTCTCGGCACGGTTCTCTCTGTCCGTATCTGCTCCGGCCCCTCTGTTCCCATGCGCGTTGGTCGCGTCGATGCCACTAGCGCCGGTCCC
TTTGGTGTCCCCGAGCCCCAGCAGGATCTCTCGTCGCACACGGCGTCGTTCGCGAAGCAAGGTTTCAACGTCAGCGAGATGATCGGTCTCGTAGCGTGCGGGCACACGATTGGCGGTGTC
CACGAGACAGAATTCCCGACCGTCGTCACCGGATTGATCAACTCTGACAACAACACGAGCGGGATGCAGCATTTCGATGACTCGTTCTCGAAGTTTGATAACCACATCGCGGTGCAGTGG
GTCAACAGCAGCACTTCCGACGACGCACTCGCCACCGGTTTCAACACCACGATGGATTCTGACGCACGCATCTTCGCCGCCGACAACAACGCGACCATGCGCGACCTCGCCTCCAGCAAC
GACGTCTTCAACAACCGCTGCGGAGAACTCCTCGGGCGCATGCTCGACACCGTCCCCAAGGGCGTGACGCTGACCGACCCCATCGCCCCCGTCCCCGTCAAGCCGTGGAACGCGCAGTTG
AGCATCGACAGCAACGGGAATATCCAGTTGGAAGGTAACGTCCGGATCTTCTCTTCGGACCCTGCGGAGACCTTCGATGGCTACACGGTCAACATCGCCTGGACAGACCGCAACGGCGCG
TCGTGCGACGGCTGCACCGCACCCGCGACGTTCCAAGGGACTTCTAGCGGCACGATCTGGGACGGCGCGGTCCGGTTCTTCCACTTCAACACCACGATCGACCCCGCCGTCGGCTTCTCC
GCCTTCACGGTCCAGTTCTCGACCACCGCCGGGGGCGTGGTGACCACAGCAGACAACAACGGCGCGGGCTTCGCGATCAGCGATGGCGTCATGGTGCAGCCCGCGACCAGCTGTGTCATG
TCTGACGGCACCGTCAATATCGTCGCTGCGGTGCGCAACGACCAGACGGTCTCGTCCGCGTCAGTCAGCTTCACCTCCGCCGAGACGCAGGTGGGCTCGGTCGGCCGTCTGATGGTGCCG
TCGACGGCGAGCCTGACGCGGACCACGAGCTCCGCGTCGAGCCTGTACGACCTGTACTCCTCGCAGTTCGTCGTTGGGATCGCCGCCAGCTCGTCGTTCGACCTCTCTGTCGACCTCGGG
GGCACGACGCACACGGACGCGTTCAACCTTGTGAAGAACCTCAACAGCTGCTGA

Retrieve as FASTA