RedOxiBase: View Perox 10575

Entry information : EcamRboh06 ( EcC001135.20)

Entry ID	10575
Creation	2012-02-28 (Qiang Li)
Last sequence changes	2013-03-25 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-02-16 (Christophe Dunand)

Peroxidase information: EcamRboh06 ( EcC001135.20)

Name (synonym)

EcamRboh06 ( EcC001135.20)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus camaldulensis [TaxId: 34316 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EcamRboh06 start..stop	S start..stop
EguRboh06	1764	0	1..857	1..857
EgrRboh06	1761	0	1..857	1..857
EglRboh06	1758	0	1..857	1..857
AgluRboh06	1315	0	3..857	14..843

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..370	370	N° 2	474..636	163	N° 3	707..755	49	N° 4	849..962	114
N° 5	1061..1867	807	N° 6	2143..2238	96	N° 7	2329..2444	116	N° 8	2545..2647	103
N° 9	2770..2861	92	N° 10	2941..3151	211	N° 11	3183..3317	135	N° 12	3450..3578	129
N° 13	3653..3731	79	N° 14	3839..3948	110
join(1..370,474..636,707..755,849..962,1061..1867,2143..2238,2329..2444,2545..26 47,2770..2861,2941..3151,3183..3317,3450..3578,3653..3731,3839..3948)

Literature and cross-references EcamRboh06 ( EcC001135.20)

Protein sequence: EcamRboh06 ( EcC001135.20)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	857
PWM (Da):	98012.41	Transmb domain:	o290-308i423-445o471-493i659-676o
PI (pH):	9.78

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGDSSKWILESIEVDDMADVPLDSSNKSGVHSGGPTSKVNDEAMLARSSSSTRKQVGFQGTGPPVLSRMGRTESGARRGLKSLRFLDRTITGKEVDAWKSMEKRFNQFAVDGRISKDKFGTCIGMGESKEFAGELFDALARRRKIHSENGITQEEMRAFWDDMTNQDIDSRLQIFFDMCDKNGDGKLSEEEVKVIILSASANKLSNLKQQAASYAVLIMEELDPDHLGYIEMWQLETLLREMVSSEEANKLAKKTHTLARTMIPRQYRTPISKFLSKTFEFLQENWKRVWVMSLWLTLNLILFVWKFRQYKERDIFQVMGYCVCFAKGAAETLKFNMALILIPVCRRTLTKLRSTALSRIFPFDDNINFHKSIALAIVIGTSIHIIMHLSCDFPRLISCPKPKFLRYAGPNFDYKQPSYLDLVESVPGITGIIITILMAFSFTLATHSFRRNVIKLAWPFHHLAGFNAFWYAHHLLFLVYALLIVHGYFLFLSRHWYSKSTWMYLSVPLLLYVSERIFTAIDERNHRVNVIKAIIYTGNVLALYISKPPGFKYKSGMYMFVKCPDISNFEWHPFSITSAPGDDYLSVHIRTLGDWTMELKNRFAVCEPPNKPAGRGSLVRLQTKAISDYDPTQVRFPKILIKGPYGAPAQNYKKYDILFLIGLGIGATPFISILKDLLNQIKPNKQNNVSQKFITSNKFSRCRRDPGQSIPGANKKAPERAYFYWVTREQGSFEWFKGVMDDIADYDHNHIIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDVVSESRIRTHFARPNWRKVFSQLASAHPSSRIGVFYCGSPTLTQPLKKLCQEFSLNSSTRFQFHKENF

Retrieve as FASTA

Remarks

Complete sequence from genomic. Incorrect prediction from kazusa (Bad prediction at 5' end).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGGACTCCTCTAAATGGATTCTGGAAAGCATCGAGGTCGACGACATGGCTGATGTGCCCTTGGACAGCTCCAACAAAAGCGGCGTTCATAGCGGCGGCCCGACTTCCAAGGTGAAC
GATGAGGCAATGCTCGCCCGGAGCTCGAGCAGCACGAGGAAGCAAGTTGGGTTTCAGGGCACTGGGCCACCGGTGTTGTCTAGGATGGGAAGGACCGAATCCGGTGCCAGGAGAGGGCTC
AAGAGCTTGAGGTTCTTGGACAGGACCATCACAGGGAAGGAGGTGGACGCTTGGAAGTCCATGGAGAAACGTTTCAACCAATTCGCAGTCGATGGGAGGATCTCGAAGGACAAGTTCGGG
ACCTGCATTGGTAATTCGACGCTGACTTGGAAACCCCAAGACGGGGTCCTGCTTGAAATCTAACTTTTCCTGGGGAAAAAAGAGCTCAGGGGTTGTGAAATGCTGTGTTGCAGGAATGGG
AGAATCCAAGGAATTTGCGGGGGAGCTGTTTGATGCATTGGCGAGGCGTAGGAAGATACACTCGGAGAACGGGATTACTCAGGAGGAAATGAGGGCGTTTTGGGACGATATGACCAACCA
GGACATCGACTCACGCCTTCAAATCTTCTTTGACATGTAAAGAATTGTGCTTTCTGTGTCTCTTGGTTGTGTTGTTCACAGGAAACTAACTTCGCTAGTGTTTCAGGTGTGACAAAAATG
GCGATGGTAAGCTCTCCGAGGAGGAGGTGAAGGAGGTGAGAGATAGCAACTTCCCAAAATCTCCTCTTCTTGTGTTTTTGGACGCTAATGGATAAAATTCTTTTACCTTTTAATTCTGGC
AAGTGAAGGTAATCATATTGAGCGCTTCAGCAAACAAGCTGTCCAATCTCAAGCAGCAAGCCGCATCCTATGCCGTGTTGATCATGGAAGAGCTCGATCCTGACCATCTTGGGTATATCG
AAGTGAGTAGAAGTCTAGAGCCATTCCTTGAGAAGTGCATGTTTGTGTGTTCATCTATCGAGTCCTCTCTCTCTCTTCCTAATTTTGCAAGCTTAAGCAGATGTGGCAACTCGAGACTCT
ACTGAGGGAGATGGTGAGCTCCGAAGAAGCCAACAAGCTGGCCAAAAAAACCCACACTCTTGCAAGGACCATGATTCCGAGACAATATAGGACTCCGATCAGCAAATTTCTATCGAAAAC
CTTCGAATTTCTCCAGGAGAATTGGAAGAGAGTGTGGGTCATGTCACTTTGGTTGACTCTAAATTTGATCCTTTTTGTCTGGAAGTTCCGTCAATACAAGGAGAGAGATATATTTCAAGT
CATGGGTTACTGTGTTTGTTTTGCGAAGGGCGCTGCTGAGACGCTCAAATTCAACATGGCCCTTATTCTCATCCCTGTGTGTAGGAGGACGCTTACTAAACTTAGATCAACTGCCCTAAG
TAGGATATTTCCTTTCGACGACAATATTAATTTCCACAAGTCGATAGCACTGGCAATAGTAATCGGGACTTCAATACATATTATTATGCACCTTTCGTGTGATTTCCCAAGACTAATTTC
ATGTCCTAAGCCAAAGTTTTTGAGGTACGCGGGGCCTAACTTTGATTACAAGCAGCCAAGTTACTTGGATCTAGTTGAGAGTGTTCCTGGCATTACCGGGATTATAATTACCATCTTGAT
GGCTTTCTCTTTCACACTGGCCACGCATTCATTTAGAAGGAATGTCATCAAGTTAGCTTGGCCATTCCACCATCTAGCCGGGTTCAATGCCTTCTGGTACGCTCACCATTTGCTGTTCCT
GGTCTATGCTCTCTTGATAGTGCACGGCTACTTCCTGTTTCTGAGTAGGCACTGGTACTCAAAAAGTGTAAGTATGACTTATGCACTTGAACTAAATCATTTTATTTGTTCATAGATTTG
TCAGATGATTTTACTGCGACGACAGAACTGTTTCTGCATAACAATGTGTTTGTATTCAATGCTATGCTTAACATGTCATCTTTGGTTCATTGCATATTCGAATTTCATTGAATGTGTTCT
TGAGCTTAAAATACCTTATAACTTTGTCAAGTGATATTGCTGTCTTAGTTTCATGCTGATGAAAGAAAGCTATTAGGAACTGTTAAATTTCTTCCTGTGCAGACATGGATGTATCTCTCT
GTTCCTTTATTACTTTATGTCAGCGAGAGAATTTTCACAGCTATTGATGAGCGCAACCATCGTGTCAATGTTATCAAGGTCAGCAATCATAGAGCTCTCCTGCCTTCGATTCTCAAGTCC
CAGGAACATGTATAAGTGCTTATGAACTGAATACATGAGTTATTGCAGGCAATCATATACACAGGAAATGTTTTGGCGTTGTACATAAGCAAACCCCCAGGATTCAAGTATAAAAGCGGA
ATGTATATGTTTGTCAAGTGTCCAGATATTTCCAACTTCGAGTGGTAATGCATTGCTTTACTCAACAACAGGCTAAACCAAGTCTGTTAGTTGCTAGCTGCACATTTTTATGAATTGAGC
TGATTGATTTGTCACTTGTCATAGGCATCCTTTTTCTATCACTTCCGCTCCAGGAGATGACTACTTGAGTGTCCACATACGAACCTTGGGAGACTGGACCATGGAGCTTAAGAACAGATT
CGCACAGGTTAACAGATTATGGTGCTATGGCTAGAAGTTTATCTACTGTAACACACTACTGCTTGCTTCTTGATCTTAAATGTCTCACTTTCTGTTTCCACTTTTAAGTGCTAAGTTGAA
GAATTGCAGGTTTGTGAGCCACCAAACAAGCCAGCGGGAAGGGGCAGTCTAGTGAGGCTTCAAACCAAGGCAATCTCAGATTATGATCCCACACAAGTCAGGTGGAGCAAAGTTTCAGTG
ATCTTGTTTTGTGGCTTCAATGATGTTGTTAAATCTCATAATTTCTTTTCAATTTTACAGATTCCCGAAAATCCTCATTAAGGGACCGTATGGAGCCCCAGCTCAGAACTACAAAAAGTA
CGACATCCTTTTCCTTATCGGTCTAGGGATCGGGGCAACGCCGTTTATCAGCATTTTGAAGGACCTCCTCAACCAGATCAAGCCGAACAAGCAAAACAATGTGAGCCAAAAGTTTATAAC
TTCAAACAAGTTTAGCAGATGTAGGAGACAAGTAGTAAACAGGATGATTTGACCACTTGCAGGATCCTGGACAAAGCATACCAGGTGCAAATAAGAAGGCACCGGAAAGAGCATACTTCT
ATTGGGTAACAAGGGAACAGGGTTCGTTTGAATGGTTCAAAGGTGTGATGGATGATATCGCAGATTACGACCATAATGTAAGTTCCAAAACAATGGAAAACATGCTTCATGACCACCTCG
CCTTCTTACGTTTACACTCATTCTTGTAGTAGCACATCCTCTTCTGTTTATATCATTCTCACTGTTTATTGGTCTAATGAGCTGAGCAGCATATAATAGAGATGCACAACTACTTGACTA
GTGTATATGAAGAAGGAGATGCACGGTCAGCACTCATCGCAATGGTGCAGAAGCTGCAGCATGCAAAGAATGGAGTGGATGTTGTCTCAGAAAGCCGGGTATATGCCTCTAGTTATTATT
CCTCTGATCATTTAATTCATGTCTGGCTCATTTCCGACATACGTGCGCGCAGATAAGAACGCATTTTGCGAGGCCTAACTGGAGAAAGGTGTTCTCCCAATTGGCAAGTGCTCATCCTTC
TTCTCGAATAGGTACTGGTTTTGATTTGCGGCCATGGAGAAATGTCAAAATGCACTTAGCTGATGAGATTGTTCTCATTCTGGCTTTTGCCTCTAATGTGGATGTTGGGCCCTTGCAGGT
GTTTTCTACTGTGGAAGTCCAACCCTTACTCAGCCGTTAAAGAAGCTTTGTCAAGAATTCAGCCTAAACTCATCGACCCGTTTCCAATTTCACAAGGAAAACTTCTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA