Entry information : OsPrx48(LOC_Os03g25370)
Entry ID 1058
Creation 2005-06-16 (Filippo Passardi)
Last sequence changes 2005-06-16 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsPrx48(LOC_Os03g25370)
Name OsPrx48(LOC_Os03g25370)
Class Class III peroxidase    [Orthogroup: Prx143]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx48
start..stop
S start..stop
OsPrx47 603 0 3..339 4..331
OsPrx46 540 0 14..339 19..339
SbPrx15 538 0 26..339 19..332
ZmPrx145 533 0 2..339 3..336
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1058' 'join(14337998..14338255,14338372..14339133)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14337998..14338255 256 N° 2 14338372..14339133 760  
join(14337998..14338255,14338372..14339133)


exon

Literature and cross-references OsPrx48(LOC_Os03g25370)
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB:   Q5U1P5
DNA ref. GenBank:   NC_008396.1 (14337998..14339130)
Protein sequence: OsPrx48(LOC_Os03g25370)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (319)
PWM (Da):   %s   35631.98 (33633.9) Transmb domain:   %s   i50-72o
PI (pH):   %s   6.7 (6.50) Peptide Signal:   %s   cut: 21 range:21-339
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARLAALLVSLAMLMAAVTAARVERAGAGFYTPPSPSTCGLKIGY
YHDKCPHAEAIVKGVVAAALHRDPGVGAGLIRMLFHDCFVE
GCDASVLLDPTPANPQPEKLAPPNNPSLRGFEVIDAAKDAVEAACPGVVSCADIVAFAARDASFFLSDSRVSFDIPSGRLDGRYSNASRALDFLPPPTFNLGQLVANFAAKGLSVEDMVV
LSGAHTIGLSHCSSFVSDRLAVASDIDPSFAAVLRAQCPASPSSSNDPTVVQDVVTPNKLDNQYYKNVLAHRALFTSDASLLASPATAKMVVDNANIPGWWEDRFKTAMVKMAAVEVKTG
SNGEIRRHCRAVN*

Retrieve as FASTA  
Remarks chromosome 3; no ESTs (NIAS DNA database and TIGR)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGGCTGGCTGCTCTGCTCGTCTCCTTAGCGATGCTCATGGCGGCGGTGACGGCAGCCCGGGTAGAAAGAGCGGGCGCCGGCTTCTACACACCGCCAAGCCCTTCCACCTGCGGC
CTCAAGATCGGCTACTACCACGACAAGTGCCCGCACGCCGAGGCCATCGTCAAGGGCGTCGTCGCCGCCGCCCTCCACCGCGACCCCGGCGTCGGCGCCGGCCTCATCCGCATGCTCTTC
CACGACTGCTTCGTCGAG
AGGTACGTACGTACGTACATTCATGTGTACGATATGATTGCTCGTTTCTGATCATCTTTGTGGCCGCGTGCATGACACTTGACACGTCTACATCGCCATTGC
CGACATGTGGGTGCAGGGATGTGATGCCTCCGTGCTGCTCGACCCGACGCCGGCCAACCCGCAGCCGGAGAAGCTCGCCCCGCCAAACAACCCCAGCCTCCGCGGCTTCGAGGTCATCGA
CGCCGCCAAGGACGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCCGCGCGCGACGCCTCCTTCTTCCTCAGCGACAGCAGGGTGTCCTTCGACAT
TCCGTCGGGACGCCTCGACGGGCGCTACTCCAACGCGTCGCGCGCCCTCGACTTCCTCCCGCCGCCGACCTTCAACCTCGGTCAGCTCGTCGCCAACTTCGCCGCCAAGGGGCTCAGCGT
CGAGGACATGGTGGTGCTCTCCGGCGCCCACACCATCGGCCTCTCACACTGCTCGTCCTTCGTCTCCGACCGCCTCGCCGTCGCCTCCGACATCGACCCGTCGTTCGCCGCTGTCCTACG
AGCCCAATGCCCGGCGAGCCCGAGCTCGAGCAACGACCCGACGGTGGTGCAGGACGTGGTGACGCCCAACAAGCTGGACAACCAGTACTACAAGAACGTGCTCGCGCACAGGGCGCTCTT
CACCTCCGACGCGTCGCTCCTGGCGTCGCCGGCGACGGCAAAGATGGTGGTGGACAACGCCAACATCCCCGGGTGGTGGGAGGACAGGTTCAAGACGGCCATGGTGAAGATGGCCGCCGT
CGAGGTGAAGACCGGCAGCAACGGCGAAATCAGGAGACACTGCCGGGCTGTCAATTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGGCTGGCTGCTCTGCTCGTCTCCTTAGCGATGCTCATGGCGGCGGTGACGGCAGCCCGGGTAGAAAGAGCGGGCGCCGGCTTCTACACACCGCCAAGCCCTTCCACCTGCGGC
CTCAAGATCGGCTACTACCACGACAAGTGCCCGCACGCCGAGGCCATCGTCAAGGGCGTCGTCGCCGCCGCCCTCCACCGCGACCCCGGCGTCGGCGCCGGCCTCATCCGCATGCTCTTC
CACGACTGCTTCGTCGAG
GGATGTGATGCCTCCGTGCTGCTCGACCCGACGCCGGCCAACCCGCAGCCGGAGAAGCTCGCCCCGCCAAACAACCCCAGCCTCCGCGGCTTCGAGGTCATC
GACGCCGCCAAGGACGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCCGCGCGCGACGCCTCCTTCTTCCTCAGCGACAGCAGGGTGTCCTTCGAC
ATTCCGTCGGGACGCCTCGACGGGCGCTACTCCAACGCGTCGCGCGCCCTCGACTTCCTCCCGCCGCCGACCTTCAACCTCGGTCAGCTCGTCGCCAACTTCGCCGCCAAGGGGCTCAGC
GTCGAGGACATGGTGGTGCTCTCCGGCGCCCACACCATCGGCCTCTCACACTGCTCGTCCTTCGTCTCCGACCGCCTCGCCGTCGCCTCCGACATCGACCCGTCGTTCGCCGCTGTCCTA
CGAGCCCAATGCCCGGCGAGCCCGAGCTCGAGCAACGACCCGACGGTGGTGCAGGACGTGGTGACGCCCAACAAGCTGGACAACCAGTACTACAAGAACGTGCTCGCGCACAGGGCGCTC
TTCACCTCCGACGCGTCGCTCCTGGCGTCGCCGGCGACGGCAAAGATGGTGGTGGACAACGCCAACATCCCCGGGTGGTGGGAGGACAGGTTCAAGACGGCCATGGTGAAGATGGCCGCC
GTCGAGGTGAAGACCGGCAGCAACGGCGAAATCAGGAGACACTGCCGGGCTGTCAATTAA

Retrieve as FASTA