The peroxidases and oxidases database
Entry information : EcamRboh03 ( EcC012018.20)
Entry ID 10580
Creation 2012-02-28 (Qiang Li)
Last sequence changes 2016-04-07 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2016-04-07 (Achraf Jemmat)
Peroxidase information: EcamRboh03 ( EcC012018.20)
Name (synonym) EcamRboh03 ( EcC012018.20)
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamRboh03
start..stop		 S start..stop
EglRboh03 1170 0 1..604 1..603
EglRboh03 215 2e-60 574..678 710..814
EguRboh03 1121 0 29..604 13..587
EguRboh03 217 5e-61 574..678 694..798
EgrRboh03 1117 0 28..604 12..587
EgrRboh03 215 2e-60 574..678 694..798
JregRboh08 820 0 17..628 6..618
JregRboh08 189 3e-51 538..678 665..803
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..294 294 N° 2 405..568 164 N° 3 670..718 49 N° 4 800..913 114
N° 5 992..1798 807 N° 6 1925..2020 96 N° 7 2123..2238 116 N° 8 2330..2408 79
N° 9 2755..2883 129 N° 10 2979..3057 79 N° 11 3211..3320 110  
join(1..294,405..568,670..718,800..913,992..1798,1925..2020,2123..2238,2330..240 8,2755..2883,2979..3057,3211..3320)


exon

Literature and cross-references EcamRboh03 ( EcC012018.20)
Protein sequence: EcamRboh03 ( EcC012018.20)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   678 (300)
PWM (Da):   %s   77542.44 (31599.7) Transmb domain:   %s   i262-281o348-370i398-420o446-468i
PI (pH):   %s   10.12 (5.95) Peptide Signal:   %s   cut: 24 range:24-323
Sequence 719
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDSAVEASESSAPPHPNDIPLPSRRSSSTTRKRNVSYGGIPRMERTASSASRGLMSLRFLDRTITGKEADAWRSIEKRFHQHATNGQLSRDKFGVSIGGMGDSKEFAGELFDALSRRRKVNAENGISIDQLRQFWEDMTTRELESRLQIFFDMCDKNGDGRLTEDEVKEVIVLSAASNRLSNLQQQAASHASLIMERLDPDHQGYIEMWQLKTLLREMVNPDQRSKLSVNSQNLTRTMLPKGYRKPMSRLVHKNIERIYDNWRRIWVVGLWLVANMILFLWKFNKTRHSPAFNITGYCLCYAKGSAETLNLNMALVLLPVCRRTLTKLRSSFLGTFIPFDDNINFHKIIALAIAIGSVVHTAMHFMCNFPRITSCPKSQFMQVFGPSFHNRQPHYIDLVNNLSSTTGVLMFMMMAFSFTLATHWFRKNIVKLPWGLHHLAGFNAFWYAHHLLAVAYVFFILHGYFLVISRPWYTKTAWMYVMVPILLYTSERAFTSASELQHRVDIAKAIVYSGNVLALYMSKPPGFNYNSGMYLFVKCPDISKFEWHPFSITSAPGDAFLSVHMRALGDWTxNVIEMHNYLTSLYEEGDARSALIAMVQKLQHAKNGVDIFSESRIKTHFARPNWRKVFSEIAMRHKSSRIGVFYCGSSVLTKTLRKLCQELSLESSTRFQFHKENF

Retrieve as FASTA  
Remarks Partial sequence from genomic (part of the sequence is missing due to NNNNNN in DNA). Incorrect prediction from kazusa.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGTGCGGTGGAAGCCAGTGAGAGCTCCGCCCCGCCGCATCCTAATGACATACCATTGCCATCGAGGCGGAGCTCAAGCACGACGCGGAAGAGGAATGTATCGTACGGCGGCATC
CCTAGGATGGAAAGAACGGCATCCAGTGCCTCTCGAGGCCTCATGAGCTTGAGGTTTCTGGATAGGACAATTACCGGGAAGGAAGCAGATGCCTGGAGATCAATCGAGAAGCGTTTCCAT
CAACACGCGACGAACGGCCAACTCTCGAGAGACAAATTTGGAGTCAGCATTGGTTGATCCTTAGAAAGTCTTGCTGCTATCTGAATCATGATTTTCCAAATAATAATAATAATACTAATT
GCACAATTTGATTGAGAAGTGACATTGTTTTAATCTGCGTGGAAGGAATGGGAGATTCCAAGGAATTTGCAGGAGAGTTATTCGACGCCTTATCAAGACGGAGGAAAGTGAATGCCGAGA
ATGGAATATCAATAGACCAATTGAGACAATTTTGGGAAGACATGACGACTCGAGAACTCGAATCCCGGCTGCAGATATTCTTTGATATGTAAAGCAACTCTCGTCCATCTCCTATTATCG
TTCGCAACCTAAAGCGTACATTGCGTTGCTGGTATTCCATGTGATGAAGTTTTGCGACGAATGCTGCAGGTGTGACAAGAATGGTGATGGGAGGCTAACTGAGGATGAGGTAAAAGAGGT
GAGGCAAAAGGAGACTTACTAATCACTCGTTTAGCGTGTCCTTTGGGCTCTTTTATGATGGACTGGAAATTTTTCAAAGGTGATAGTGTTGAGCGCCGCCTCGAATAGGCTGTCGAATCT
CCAGCAGCAAGCGGCATCTCACGCATCTTTGATCATGGAAAGACTTGATCCCGACCATCAAGGGTACATCGAGGTACCAAGTCAGATAGTCCATCATGTCCTGTTCGAGTTCGTGTTCCT
CCCATGTTGTTCATCGCTTCTTTGTTTTCAGATGTGGCAATTAAAGACTCTACTGAGAGAAATGGTGAACCCTGATCAAAGGAGCAAGTTGTCAGTGAATTCTCAAAACCTGACCAGAAC
CATGCTTCCCAAAGGATACAGAAAACCAATGAGTCGGCTCGTGCACAAGAACATCGAAAGGATCTATGACAATTGGAGGCGAATATGGGTCGTCGGGCTGTGGCTGGTCGCAAACATGAT
CCTCTTCCTTTGGAAGTTTAACAAAACGAGGCACAGCCCCGCCTTTAACATCACGGGCTATTGTCTTTGCTACGCCAAGGGCTCTGCCGAGACACTCAATCTCAACATGGCTCTCGTCCT
CCTCCCCGTATGCAGAAGAACTCTCACGAAGCTACGGTCGTCCTTCCTTGGTACCTTCATACCATTCGACGACAACATAAACTTCCACAAGATAATCGCGCTGGCCATAGCTATAGGATC
TGTCGTTCACACTGCAATGCATTTTATGTGCAACTTCCCCAGGATAACTTCATGCCCAAAATCACAATTCATGCAAGTGTTTGGCCCGAGCTTCCATAATAGGCAACCTCATTACATCGA
CTTGGTCAATAACTTGTCCAGCACCACCGGGGTTCTCATGTTCATGATGATGGCCTTCTCTTTCACACTGGCGACTCATTGGTTCAGGAAAAACATCGTCAAGCTACCGTGGGGGCTCCA
TCATTTAGCAGGATTTAATGCCTTCTGGTACGCACATCATTTGCTAGCCGTTGCCTATGTCTTCTTCATACTTCACGGCTACTTCCTCGTGATCAGTCGACCTTGGTACACGAAAACGGT
AAGTACACAATGGTCTAATTCCTTATTCTGTTCACCATTAATTCATAAGGCCTGAATTCTCCGGTAGTACCATCATTCCTCTGAAAACACGGCAAGAATCATTATACGGTTGGACTTTAT
GCAGGCATGGATGTATGTGATGGTCCCAATCCTACTCTACACAAGCGAGAGAGCATTCACATCTGCTTCTGAACTCCAACATCGAGTTGATATCGCTAAGGTATCACTCACTTTACCGAA
CTGCCGTGTTCCACATTCCTTTTTGGTTTACACGAATCTTAGTGCTACGATAAATTCATGCTCGGCTCAAAAAACTTTTCAGGCCATTGTTTATTCTGGAAACGTCCTTGCATTGTACAT
GAGCAAGCCTCCAGGTTTCAACTACAACAGCGGAATGTACCTTTTCGTCAAATGCCCTGATATATCAAAGTTCGAATGGTGTATAGAACATAATCGCTGAAACCTATTTACTCGTCATAC
CCCTATGGCTTTTATTGCTGAAACTCATCGGTGTTTTTGCTCGGGACAGGCATCCTTTCTCCATTACTTCCGCACCGGGAGATGCCTTCTTGAGTGTTCACATGCGAGCCTTGGGCGATT
GGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAATCCTCCAATTAATTATAGTTTTTCAACTAAAATGTCGCTTTGGGTACTGGTGATTGTTGTAGAATGTA
ATAGAGATGCACAACTACCTGACCTCTCTATATGAGGAAGGAGATGCAAGATCAGCACTCATTGCCATGGTCCAAAAGTTGCAGCATGCGAAGAATGGCGTCGACATCTTCTCGGAAAGT
CGGGTAACTCTTGATCAGTCACCCAAAAGAAAAACAAAGAAACATTCACAGCACAATGCACCTATTTAGGCTGTCCTTTAACGTTGCTTGTTCGACAGATAAAAACTCACTTTGCGAGGC
CTAATTGGAGAAAGGTGTTCTCTGAAATTGCAATGCGGCACAAGTCGTCTCGTATAGGTATGACATCACATCCGATGAACGTGTCAACATAATGGCACTTGATTTGGTTGTTCTAGCCAG
TTTGGAACATGAACCTGTGATTTTCTAACTGTTGGAACTTGAACATTCTACCAATTCGGGTCTGATATGTCGGTAATAATTTTCCTGCAGGTGTTTTCTATTGTGGGAGTTCGGTGCTCA
CCAAAACACTGAGGAAGCTATGTCAAGAACTCAGCCTAGAGTCGTCAACTCGCTTCCAATTCCACAAGGAAAACTTTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACAGTGCGGTGGAAGCCAGTGAGAGCTCCGCCCCGCCGCATCCTAATGACATACCATTGCCATCGAGGCGGAGCTCAAGCACGACGCGGAAGAGGAATGTATCGTACGGCGGCATC
CCTAGGATGGAAAGAACGGCATCCAGTGCCTCTCGAGGCCTCATGAGCTTGAGGTTTCTGGATAGGACAATTACCGGGAAGGAAGCAGATGCCTGGAGATCAATCGAGAAGCGTTTCCAT
CAACACGCGACGAACGGCCAACTCTCGAGAGACAAATTTGGAGTCAGCATTGGTGGAATGGGAGATTCCAAGGAATTTGCAGGAGAGTTATTCGACGCCTTATCAAGACGGAGGAAAGTG
AATGCCGAGAATGGAATATCAATAGACCAATTGAGACAATTTTGGGAAGACATGACGACTCGAGAACTCGAATCCCGGCTGCAGATATTCTTTGATATGTGTGACAAGAATGGTGATGGG
AGGCTAACTGAGGATGAGGTAAAAGAGGTGATAGTGTTGAGCGCCGCCTCGAATAGGCTGTCGAATCTCCAGCAGCAAGCGGCATCTCACGCATCTTTGATCATGGAAAGACTTGATCCC
GACCATCAAGGGTACATCGAGATGTGGCAATTAAAGACTCTACTGAGAGAAATGGTGAACCCTGATCAAAGGAGCAAGTTGTCAGTGAATTCTCAAAACCTGACCAGAACCATGCTTCCC
AAAGGATACAGAAAACCAATGAGTCGGCTCGTGCACAAGAACATCGAAAGGATCTATGACAATTGGAGGCGAATATGGGTCGTCGGGCTGTGGCTGGTCGCAAACATGATCCTCTTCCTT
TGGAAGTTTAACAAAACGAGGCACAGCCCCGCCTTTAACATCACGGGCTATTGTCTTTGCTACGCCAAGGGCTCTGCCGAGACACTCAATCTCAACATGGCTCTCGTCCTCCTCCCCGTA
TGCAGAAGAACTCTCACGAAGCTACGGTCGTCCTTCCTTGGTACCTTCATACCATTCGACGACAACATAAACTTCCACAAGATAATCGCGCTGGCCATAGCTATAGGATCTGTCGTTCAC
ACTGCAATGCATTTTATGTGCAACTTCCCCAGGATAACTTCATGCCCAAAATCACAATTCATGCAAGTGTTTGGCCCGAGCTTCCATAATAGGCAACCTCATTACATCGACTTGGTCAAT
AACTTGTCCAGCACCACCGGGGTTCTCATGTTCATGATGATGGCCTTCTCTTTCACACTGGCGACTCATTGGTTCAGGAAAAACATCGTCAAGCTACCGTGGGGGCTCCATCATTTAGCA
GGATTTAATGCCTTCTGGTACGCACATCATTTGCTAGCCGTTGCCTATGTCTTCTTCATACTTCACGGCTACTTCCTCGTGATCAGTCGACCTTGGTACACGAAAACGGCATGGATGTAT
GTGATGGTCCCAATCCTACTCTACACAAGCGAGAGAGCATTCACATCTGCTTCTGAACTCCAACATCGAGTTGATATCGCTAAGGCCATTGTTTATTCTGGAAACGTCCTTGCATTGTAC
ATGAGCAAGCCTCCAGGTTTCAACTACAACAGCGGAATGTACCTTTTCGTCAAATGCCCTGATATATCAAAGTTCGAATGGCATCCTTTCTCCATTACTTCCGCACCGGGAGATGCCTTC
TTGAGTGTTCACATGCGAGCCTTGGGCGATTGGACNNNNAATGTAATAGAGATGCACAACTACCTGACCTCTCTATATGAGGAAGGAGATGCAAGATCAGCACTCATTGCCATGGTCCAA
AAGTTGCAGCATGCGAAGAATGGCGTCGACATCTTCTCGGAAAGTCGGATAAAAACTCACTTTGCGAGGCCTAATTGGAGAAAGGTGTTCTCTGAAATTGCAATGCGGCACAAGTCGTCT
CGTATAGGTGTTTTCTATTGTGGGAGTTCGGTGCTCACCAAAACACTGAGGAAGCTATGTCAAGAACTCAGCCTAGAGTCGTCAACTCGCTTCCAATTCCACAAGGAAAACTTTTAG

Retrieve as FASTA