RedOxiBase: View Perox 10590

Entry information : EcamKat[P]06 (EcC015324.20)

Entry ID	10590
Creation	2012-02-29 (Qiang Li)
Last sequence changes	2013-03-13 (Qiang Li)
Sequence status	theoretical translation / pseudogene
Reviewer	Not yet reviewed
Last annotation changes	2013-03-13 (Qiang Li)

Peroxidase information: EcamKat[P]06 (EcC015324.20)

Name (synonym)

EcamKat[P]06 (EcC015324.20)

Class

Catalase [Orthogroup: Kat001]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus camaldulensis [TaxId: 34316 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EcamKat[P]06 start..stop	S start..stop
EcamKat[P]08	333	1e-114	8..200	1..221
EcamKat[P]08	63	0.00000000001	200..237	369..410
EcamKat[P]04	315	3e-107	8..200	1..222
EgrKat[P]04	313	8e-107	1..200	2..230
EgrKat[P]04	56	0.000000002	179..237	358..420
EguKat[P]04	304	4e-103	1..200	1..229
EguKat[P]04	52	0.00000003	179..236	357..418

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..306	306	N° 2	575..866	292	N° 3	3561..3621	61	N° 4	3710..3760	51
join(1..306,575..866,3561..3621,3710..3760)

Literature and cross-references EcamKat[P]06 (EcC015324.20)

Protein sequence: EcamKat[P]06 (EcC015324.20)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	234
PWM (Da):	26709.61
PI (pH):	8.5

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

QTIIYVTGPILLDDYHLVEKLANFDRERIP*SAVHARGACAKGFFEVTHDISHLTRADFLQAPGV*TPVNVRFSILIHERGGPETLRDPRGSHVNFYTRVVRPQSCVQENWRILDFFFHHPESLRLFTFLFDDIGSAQDYMHMQGSGVHTYTLINKARKAHHVKFHRKPTCGxKSLLEEEAIRVGGSNHSHATLDFMISLQTIIEKENNFKQLGERCRSYEWFICR*INALSNPRVT

Retrieve as FASTA

Remarks

Pseudogene from genomic (PS is missing; two ends are missing; stops in frame). Incorrect prediction from kazusa.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CAAACTATCATCTACGTCACAGGTCCAATTCTTCTTGACGATTATCACCTTGTGGAGAAACTTGCCAACTTTGATAGGGAGAGGATTCCATAGAGTGCTGTCCATGCCAGGGGAGCCTGT
GCAAAGGGATTCTTTGAGGTCACTCATGACATTTCTCACCTTACCCGTGCTGATTTCCTTCAGGCACCAGGAGTTTAAACACCTGTGAATGTCCGTTTCTCCATCCTCATCCACGAAAGG
GGCGGCCCTGAAACCCTGAGGGACCCCCGGGGTTCTCATGTGAACTTCTACACAAGAGTGGTGAGGGTCGTTTTGGTAGTAGACATGAATGTGCAGTATGGACGGGCACGAGTATGATGC
TCCCTGTGATGAATCCTTTCACAGGTGGCCTAAACTCGACCGATGCATATGGCAGTTCTCTTGTCCACATTGCATACATTTGTTTTGTTGCACTTTGCTATGTGATCTTACCTTTTCTGT
TACTGCAGGGTAACTTCGATCTAGGTAGAACATTTCCATCTCTTATCTGCGATGGGGTGAAATTCCCGGATACGGTTCGTGCACTTAGACCAAACCCCAATCCTGCGTCCAGGAGAACTG
GAGGATCCTTGACTTTTTCTTCCACCATCCTGAGAGCTTGCGCTTGTTCACCTTCCTCTTTGATGATATTGGTAGTGCACAAGATTACATGCACATGCAGGGCTCTGGAGTTCACACCTA
CACTTTGATCAACAAGGCCAGAAAAGCGCATCATGTGAAGTTTCACCGGAAACCAACTTGCGGGTCNAAGAGCTTGCTGGAGGAAGAGGCAATTAGAGTCGGGGGATCCAATCACAGCCA
TGCAACTCTGGATTTTATGATTTCATTGCTGCTGGAAACTATCCTGAATGNNNNNNNNNNNNNNNNNNNNCCTGCAATGCGATCCTTGACAAAGATTTAACAAGAGACTAGCCTTTAGAG
TTGCTTTCTACTCGCAAAATTCTAATGCCTCAGTTGCATATCCTACTAAATAACAGATTTCAGTTCCATCTGGTCTCGAGAAATAAGTTAAATCTCCATCTCAATGAGCCCTTGACCCTG
TGGATGGGGAGTATCGACTTCCAGATCCACAAGGACCGTCAGCACTCTGATTGTGGTGAATTAGTGATCAATGGTGGTTGTGATGATGCTGGTAAGAAGAAGGCCGGCTCAATGCGCCCG
CCTTGGTCTCCTGGTTTTTCTTACGAATGGTGTTGATATTTTCTAATGTTGCCAGCACTTCTTCCATCGAGGGCCTCGCTTTAGGATCGGCCTCCAGGCATTGGAGGATGAGGTCAGCCG
CCTGAGATGCAGCTATTGGAGGGTATTGACCTTCTAGTCTCGGATCCATTATCGTCCTTAGCTTCCTCTTGTCGTGGAGCAACGGCCCCACCCAATCCACCAGATTCCACTGGCCGTTGG
GGCGAGTACGGTCGATCGCTCGTGAACCCGTCAACATTTCTAGCAGAACCACCCCGAAACCATATACATCACTCTTCATGTACAAATGTCCTGTCAAATTGAGCCTTTATCATTCTGACA
CGCATTTTCTACGATCATATGAAATCTTCGCTAAAGATGAAGAAGCATATGAGAGGGAGATCTCTATGAACAGCGCTGCAGTAAGATCATTTCGCAAAACACGTGCCTAGTAATCACGTC
AATCTTCTAAAGAACGTAGTAGTCACCGACCCAACAGTGCCCACTAAGAAAAAAGATGGGATCTCTGTCTTACCGGTGGCAATGTACTCGGGCGCGGCGTATCCATGTGTTCCGATCACT
TGCGTGGTCACATGAGAGTTCCTGCCTGCCAGTCCCAGCTTTGCTAGCCCGAAATCCGAGCGATTTTGATGAGCAGACACTGCAGTAAATTCATTTCGCAGAACACCTGCCAAGTAATCT
CGTAATCTTCTAAAGAGCGTTGTCGTCACTGATCCAACATTGCCCGCGGAGAAGGAAGATGGGATCTCTGTCTTACTAGTGGCAGAGTACTCGCGAGGGGCATAGCCATCCATCTCGATC
ACTCGCGTGCTCACATAAGAGTCCCCACCCGCTGGCCCCTGTATTGCTAGCCCGAAATCTGAGAGCTTGGCGTTGTAGTCCTAGCGCCACAACGAGAGAAAGAGAACGAAGTTTCTCAAT
TAATCCCCAAGAATGTTAGTTCTACATCCATGTATCATCTAATAATCACAGGCGTAAATCCCATGCACATGGACCGTGTGATCTAAAGGCTCCTCAGCATAAATCTAAAGTATCCGGTGC
ATCAAATGTACGAAGGCGACACCAACCGAAATTGAGATGGTTTAAAGTGAAATTTGAGCTTTGTATAGTTTTACTAGGCGACGTGGGCGACGTTTATACGGTATCCTTAAAAGAAATTCT
TGATAGCTGGAAAAAACAAATGAAAATAATGAAGTAGATAGAAAAATTTACCGCATCCAATAATATATTGGAAGATTTAAAATCCCGGTAGATGACGTTATTCTCGGGTGTATGCAAGAA
TTCAAGCCCGCGGGCAGCTCCGATTGCTACTTTAAGCCTCACGTCCCACGGAAGTGGTTCAGCTTTCCCTGAATTACCATGGGCGTTATTTTATTTTATTTTTACTGTTTGATATCCGAG
TGAAGAAAAAAAAAAAAAAAAGGTAATGCTTAGCGAAAAACAAAAATAGGTAATGCGAATGATCTTACTTCTGAAAAGGTGATTTTCTAAGCTTCCCCTCTTCATGTACTCGTACACAAG
TAGGTAGTGATCGTCTTCCCGGCAATACCCCAATAATTTCACCACATTCGGATGAGAAAGTTTCCCTAAGAACTTGACTTCCGACTGTGGAAGGATAACATAAAATAAACTTTATTGTTA
ACCAATCCACATAAAATTGTGTTGATAGTCAGTTTCGCGATCTTTTGCACAAATCAGGGTGAGTTCAATGTATAATGTGCAGCAATTTGTGGTTTTTTACTATATACGAAAGGCATGTGT
TTACAGCCCAAAATCATAGAGAAAATTCAGGGAAAAGTACAAAAAAAGTCCTAAACCTATTGCATTGGTACCAATTCAGTCTTAAACTTTTCAATTGGACCAATTTAGTCCTAAACCTTT
TAATATTGATACCAATTCAGTTCATCCGGCCAATTTTGGCCAGCCGGTGCTGACATGGATGTCGGCCGGTAGCCGAACGCTGACATGGCAATTTTTATGATTTTTTCGAATTGTTTTATG
ATTTTTTATGATTTTTTATTAATTTGTTTCCTTTTTTCTTTTTTTTTTCCTTTTCTTTTATGCTTTCTTCTTCGTGGTTGCCGGCGAGCCTCCGGTGAGGCTCGCNNNNNNNNNNNNNNN
NNNNNTATGCTGACTGGAAAGCATGAAAAGGTGNGTTTTTAGTTAGGATCNCTTTTACGTAAACAGAGATTGATTGTCTTGAGGTGCTTTCATGGCGATGTCCATGGGATAGACTCAGCT
TGTCCTAGATGAGCAATTGAATTGCAGTGAGTAGTGTGACTGATGTATGTGTTTGGATTTTGTTTACTTTTGTTGCTCCAAACAGACCATCATTGAGAAAGAGAACAACTTCAAGCAGCT
TGGAGAGAGATGCCGATCATACAGGTATTCTTCAGTTGCGCATTTCCTGAAAATAGTTTGATGGTCTCGTGTTTCTCAATCGTCTGTCTCTGTTTTCATTTTTCAGGTAAGAGTGGTTCA
TCTGCCGATAGATCAATGCTTTATCTAACCCACGTGTGAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA