View Redoxidase 10599

Entry information : EcamGPx06 (EcC043155.30)

Entry ID	10599
Creation	2012-02-29 (Qiang Li)
Last sequence changes	2013-02-06 (Qiang Li)
Sequence status	partial
Reviewer	Qiang Li
Last annotation changes	2013-10-30 (Qiang Li)

Peroxidase information: EcamGPx06 (EcC043155.30)

Name (synonym)

EcamGPx06 (EcC043155.30)

Class

Plant glutathione peroxidase [Orthogroup: Gpx2001]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus camaldulensis [TaxId: 34316 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EcamGPx06 start..stop	S start..stop
EgrGPx06	375	2e-134	1..185	1..185
EguGPx06	371	7.21e-133	1..185	1..185
EglGPx06	275	4.74e-95	1..185	1..184
EgrGPx07	266	9.67e-92	1..185	1..179

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10599' 'join(1..294,1049..1125,1334..1395,1573..1703)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..294	292	N° 2	1049..1125	75	N° 3	1334..1395	60	N° 4	1573..1703	129
join(1..294,1049..1125,1334..1395,1573..1703)

Literature and cross-references EcamGPx06 (EcC043155.30)

Protein sequence: EcamGPx06 (EcC043155.30)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	188
PWM (Da):	20357.37
PI (pH):	9.48

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLCSSTKALLLRCRNLRAPLASSSPSSSALPFPIPFSPSVAEQTLLSPRPISSLPAPGPPIKPPPPFGCRSFVSRDRRSSRAMASQSSKGSIYDFTVKDARGNDVDLGSYKGKVLLIVNV
ASQCGLTNSNYTELSQVYEKYKNGLEILAFPCNQFGAQEPGTNEQIVEFACTRFKAEYPIFDKVKD

Retrieve as FASTA

Remarks

Partial sequence from genomic. Incorrect prediction from kazusa. 3' end is missing.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTCTGCTCCTCTACAAAAGCTCTGCTCCTCCGCTGCAGAAATCTCCGCGCCCCTCTCGCCTCCTCTTCTCCTTCTTCTTCTGCTCTGCCGTTTCCCATTCCCTTCTCTCCTTCGGTT
GCTGAGCAAACCCTTCTCTCCCCTCGCCCAATCTCGTCGCTCCCCGCGCCCGGCCCGCCGATCAAGCCGCCGCCGCCTTTCGGTTGTCGGAGCTTCGTCTCGCGCGATCGGAGATCGAGC
CGTGCCATGGCGAGCCAGTCCTCGAAGGGTTCGATTTACGACTTCACTGTCAAGAGGTCGGTTCTCTCTCGAGGTTTCCCTTTTGCAATTTCGCGGGGGAACTGTGAATCGGGAGTCGCC
CATCGGCAGAAATGTCTACCCATATTATAAAGTTCGCCTTTTTTTTTCAAGTCATTTCTGAGCGAAGATTTTGTTTCTCTTATATCCACAGCGACGCTCCGATTTTGTGTAACTCGGAAA
GATGACATTTTTATTCAATTGGTGTCGAGACTTTCTTGTAATCTATGTAAAGCTGAGGCCTTTTTCCAAAGCCCCATATCAGAAATGTTAACCTCTATTATAAAGTTCGCCTTTTTTTTT
TTTTTGGGGGGGGGGGGTCATTTCTGAGCGAAGATTTTGTTTTTTTTATATTCACAGCGACGCTTCGATTTTTTTAGCTCAGAAAGATGACATTTTTATGACTTGGTGTTGGGACTTTCT
TGTAATCTATGTAAAGCTGAGGCCTTTTTTTTTTCCAAAGTTCTTTCTGTAGCCTTGTTTTTGGAGGTTTTTGAAAGTTTAGGTGGTAATCTGAAAATGGACCAATCTACAGCACCTTTG
ATGTATAAGCTTCCCTTTTATCTATGTAATTCGCTCAAATATCGGATTTTGTTGATCCAAAATCGAGTTTTGAGTAAGTTGTTGGGGTAAGTTGGTCAGGGAGCGAGATCATGTGTGTCG
TGCCGTGTGCTGAGAGGTTGTGAATCATTTGGGGACCATGATGTTATGCTGTGCTGAGACTTGGAGATTCGGGTTCCTTTTTTTATTCAGGATGCTCGAGGAAATGATGTCGATCTCGGT
TCCTACAAGGGCAAGGTCTTGCTGATTGTCAACGTCGCTTCGCAGTGTGGTAATTCTCAGGATTGTGTTTATGCCCCGTTACAGGGAACATCTGGTTGGACTTTAATCTTGGCCGATCTG
GTTAAAAGCAATATCATATTTCATGCCTTTTATCATTTGAAATTCTTTATGCAATTCAGCTTGGGAGTAGCTCAGTGTTTTAGTAATCGGGTTGGTCCACCATGTTCTAATTTTTTTTAT
CGGTATGTTTGTTGCAGTGGACTGACCAATTCAAACTACACTGAACTCAGTCAGGTCTATGAGAAATACAAGAATCAAGAGGTCTCCTATGCCTCCCCTGATCCTGATGTCCCATAGTAT
CTCGTGTTTTAGTGGAATCCTGGCCTTAACAGGATAATAAAGATATATCGTATCAGAAAAAGCAGTTGGTTATTGGTATCACTTAGCATATGGAGATTCTAGAAAATTTAAAGAGGATGT
CACTCTGATGTGATGCAGGGTTGGAGATATTAGCATTCCCATGCAATCAGTTTGGAGCTCAGGAGCCGGGGACAAATGAGCAGATCGTAGAATTTGCTTGCACTCGATTCAAGGCTGAAT
ATCCCATTTTTGATAAGGTAAAAGATATA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA