Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
188 (170) |
PWM (Da): |
20606.79 (18510.8) |
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PI (pH):
| 10.16 (10.11) |
Peptide Signal:
| cut: 19 range:19-188 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
WVMSFSWPLA MRGYTVL*Ax xGGSVRAGAR AEGGVKLLGF SCDEVKSHKA WIKDIEAFTP RAKVMYPIIA NPNREIIKEL NLVEPEEKDA SGKQVPSRAL HIVGPDKKIK LSFLYPTSMG
KSMDEVARVL DSLQRAMKHK IATPCNWKPG DAVVISLSIS NEQAKEMSPQ GFKTADLLSR KYYLRFTHI
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from kazusa (Stops in frame, 5' end is missing). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGGGTGATGT CATTCTCATG GCCCCTTGCG ATGAGAGGAT ACACTGTTCT CTAGGCCnnn nnnGGTGTGC ACGACGGAGC TCGGGAAGAT GGCAGTGTAC GTGCCGGAGC CCGAGCGGAA
GGGGGGGTGA AGCTCCTGGG CTTTTCCTGC GACGAGGTCA AGTCGCACAA GGCGTGGATC AAGGACATAG AGGCCTTCAC TGTCCGCTAC TCTTCTCTCT CACTCTGCCT ATTAGACCTT
TTCATCACTT GGCATACATA TATACTGCAT GTCCTGTATT AACTTGCCTG TTTTGATATG GATGTTGGGT TTGATCTGAT TTGGGTGATT GTATTGTTCA AAAAGGAAAA GAAGGAGAAC
TTATAGAAAT ATGTGGTATT ATAATTTAGT AGATTGACCA AGGGAAGTCT CCTTATTAGG CACAATTTGG GTTAGATTGA GGTGGTTTAA TTGCGGGTCA CGGGGCTGAC TGTTCTGTCT
CACATTTGAG ATTGGGGCCT TTGGCTTTTG TGCAATTTTC ATTATTCCAA TTTCGAGCCA ACATTCTCAA TGTCGTGTTA TTGAGTGGGG GTGCAGCCCA GGGCCAAGGT GATGTACCCG
ATAATCGCCA ACCCGAATAG AGAGATCATC AAAGAGCTCA ACCTGGTCGA GCCGGAGGAG AAAGACGCTT CAGGGAAGCA AGTCCCTTCT AGAGCTCTGC ACATCGTCGG TCCTGATAAG
AAGGTATACA TGCCCTTCTA CCTTTTCCTT CTCGCGTTAA TTAAACTTGT ATCAAATGAA ACAAACTGCA TAAACCAATG CCATCTTATG CATGTCTGTG ATATGTGTAT TACTTAAAGT
AGCATAAACC AAATTTTCCC TTTTAAACAG AACAGATGCA GCAGGACTCT GGATCATCTA TTTTCACAAT ATAACATAAT TTGTTAGATC AAGCTGAGTT TCCTGTACCC CACGAGCATG
GGAAAGAGCA TGGACGAGGT GGCGAGGGTG CTGGACTCCC TGCAGAGGGC GATGAAGCAC AAGATCGCCA CCCCATGCAA CTGGAAGCCA GGGGACGCGG TCGTCATCTC GCTGTCCATC
TCCAACGAGC AGGCCAAGGA GATGTCCCCG CAGGGCTTCA AGACCGCCGA TCTTCTGTCC AGGAAGTATT ACCTCCGCTT CACTCATATC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGGGTGATGT CATTCTCATG GCCCCTTGCG ATGAGAGGAT ACACTGTTCT CTAGGCCnnn nnnGGTGGCA GTGTACGTGC CGGAGCCCGA GCGGAAGGGG GGGTGAAGCT CCTGGGCTTT
TCCTGCGACG AGGTCAAGTC GCACAAGGCG TGGATCAAGG ACATAGAGGC CTTCACTCCC AGGGCCAAGG TGATGTACCC GATAATCGCC AACCCGAATA GAGAGATCAT CAAAGAGCTC
AACCTGGTCG AGCCGGAGGA GAAAGACGCT TCAGGGAAGC AAGTCCCTTC TAGAGCTCTG CACATCGTCG GTCCTGATAA GAAGATCAAG CTGAGTTTCC TGTACCCCAC GAGCATGGGA
AAGAGCATGG ACGAGGTGGC GAGGGTGCTG GACTCCCTGC AGAGGGCGAT GAAGCACAAG ATCGCCACCC CATGCAACTG GAAGCCAGGG GACGCGGTCG TCATCTCGCT GTCCATCTCC
AACGAGCAGG CCAAGGAGAT GTCCCCGCAG GGCTTCAAGA CCGCCGATCT TCTGTCCAGG AAGTATTACC TCCGCTTCAC TCATATC
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Retrieve as FASTA
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