Entry information : EcamGPx[P]11 (EcC046013.20)
Entry ID 10606
Creation 2012-02-29 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-19 (Christophe Dunand)
Peroxidase information: EcamGPx[P]11 (EcC046013.20)
Name (synonym) EcamGPx[P]11 (EcC046013.20)
Class Plant glutathione peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamGPx[P]11
start..stop
S start..stop
EglGPx[P]11 136 1.07e-44 1..68 1..68
EguGPx[P]11 130 1.49e-42 1..68 1..68
EcamGPx04 80 1.33e-21 1..48 61..108
EglGPx04 79 9.17e-21 1..48 89..136
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10606' 'join(1..204)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..204 202  
join(1..204)


exon

Literature and cross-references EcamGPx[P]11 (EcC046013.20)
Protein sequence: EcamGPx[P]11 (EcC046013.20)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   66
PWM (Da):   %s   7714.15  
PI (pH):   %s   10.07
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

IEVNEEKAAP LYKFPKSGKW GIFKDEIQRN LARFLVDKNR VIIDRYYPHN ISSYR*GTV* LLKDQVHF 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (Short PS with Stops in it).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATTGAAGTGA ACGAGGAAAA GGCAGCGCCA CTATATAAGT TCCCGAAATC AGGAAAATGG GGAATCTTCA AGGATGAAAT TCAGAGGAAC CTTGCCAGGT TCCTGGTAGA TAAGAATAGG 
GTGATTATAG ATCGTTATTA CCCCCACAAC ATCTCATCTT ACCGTTGAGG TACCGTATAG CTGCTAAAGG ATCAAGTTCA TTTC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATTGAAGTGA ACGAGGAAAA GGCAGCGCCA CTATATAAGT TCCCGAAATC AGGAAAATGG GGAATCTTCA AGGATGAAAT TCAGAGGAAC CTTGCCAGGT TCCTGGTAGA TAAGAATAGG 
GTGATTATAG ATCGTTATTA CCCCCACAAC ATCTCATCTT ACCGTTGAGG TACCGTATAG CTGCTAAAGG ATCAAGTTCA TTTC 

Retrieve as FASTA