View Redoxidase 10611

Entry information : EcamRboh07 (EcC054056.10)

Entry ID	10611
Creation	2012-02-29 (Qiang Li)
Last sequence changes	2013-05-23 (Li)
Sequence status	partial
Reviewer	Qiang Li
Last annotation changes	2013-10-30 (Qiang Li)

Peroxidase information: EcamRboh07 (EcC054056.10)

Name (synonym)

EcamRboh07 (EcC054056.10)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh003]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus camaldulensis [TaxId: 34316 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EcamRboh07 start..stop	S start..stop
EguRboh07	1373	0	2..683	13..694
EgrRboh07	1354	0	2..683	26..796
DdruRboh09	974	0	9..683	34..809
ToriRboh11	971	0	12..683	50..799

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10611' 'join(1..328,1338..1494,1591..1639,1736..1849,2069..2347,2548..2934,3214..3309,3508..3623,3768..3870,3945..4109,4521..4649,5083..5161,5439..5545)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..328	326	N° 2	1338..1494	155	N° 3	1591..1639	47	N° 4	1736..1849	112
N° 5	2069..2347	277	N° 6	2548..2934	385	N° 7	3214..3309	94	N° 8	3508..3623	114
N° 9	3768..3870	101	N° 10	3945..4109	163	N° 11	4521..4649	127	N° 12	5083..5161	77
N° 13	5439..5545	105
join(1..328,1338..1494,1591..1639,1736..1849,2069..2347,2548..2934,3214..3309,35 08..3623,3768..3870,3945..4109,4521..4649,5083..5161,5439..5545)

Literature and cross-references EcamRboh07 (EcC054056.10)

Protein sequence: EcamRboh07 (EcC054056.10)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	683
PWM (Da):	77161.4	Transmb domain:	o206-225i290-309o340-362i393-415o
PI (pH):	9.05

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

FSSSYGASVVPVPYSPVQTDRDHRADDHDGGINGGTVAATSLAIQRLRFLDASAKHWRQVEERFDRIARDRYRNGVQPAARWSDFAFCVGIQRSTEYAQELLRALRGRDGLKSDITKSEL
HYFWRRLTDPCPDSKIQIFFDLCDRNMDGIVSRRDVKQVILMSAAANKVSLTGEEADEYTALIMDAVGSGDRGYIEVLFRSYWRRAWIVALWLAICVALFTWKFIQYRHRTAFEVMGYCL
CTAKGAAETLKFNMAVILLPVCRNTVTWLRASRRVSSIVPFNDNINFHKLIAAGIVIGVILHGGTHLACDFPRISSSDHSIFRQTIAAGFGYHQPSYLQILATTEVATGIAMVVLMAIAF
SLATRWPRRQAPPLPRSVRQVTGYNTFWYSHHLFVFVYALLIVHSMFLFLTSNLIEKTTWMYIAFPVLLYTGERIFRAVRSSFYEVEILKANVYPGKVLSLTISKPEGFEYRSGMYIYIQ
CSRISPFEWHPFSLTSGPDEGHLSVHIRTLGDWSYQLYSLFQEATVARTASYPKMYIDGPYGAASQDYVKYDVVVLVGLGIGATPFISILKDVVGCDHSIMEMHNFLTSMYKEEDARSVL
LSTIQALSRAKSGIDFISQTPVHTHFARPNWSSIFSKLSRRHGGSQIGVFYCGPSALAGELEEMCTKFSTKTITRFVFHKEHY

Retrieve as FASTA

Remarks

partial sequence from genomic. Incorrect prediction from kazusa. 5' end is missing.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGATTCTCCCGAGGCTCATTATACATCCTCCTCCTCCTCCTCATCCTCATCCTCTTCCTTCTCGTCTTCCTACGGCGCCAGCGTGGTTCCGGTCCCGTACTCTCCCGTCCAGACGGAC
CGGGATCACCGTGCCGATGATCACGACGGCGGAATCAACGGCGGCACGGTGGCGGCAACTAGCCTGGCCATCCAGCGGCTGAGGTTCCTGGACGCGAGCGCCAAGCACTGGAGGCAGGTG
GAGGAGCGGTTCGACCGGATCGCCCGGGACCGCTACCGGAATGGCGTCCAGCCGGCGGCCAGGTGGTCGGATTTCGCCTTCTGCGTCGCGGTGAGTGCTCCGGAACATAGGCAAAACGAT
TAACGGTTAACGATTAACGATTAACGATTTCTCGGCGATTCAATTAGAAAAATTAAATCAAAATACATTTTTTTTTTATATTTCATTTTCACATTTTTTGAGAGAAATTTGGATGCCATT
GAGCGTTCAACATGCGAGGTTGTAAGCGTCCATGCAAGGCGCGCTCTCGCTAACATGCGCTCCCGCCGCTACCCGGCACGTACACGGTGCTCAATGGCTGCCACGTAAGCAGGCGCACGT
TAGCACGGAAAATGCTTTTTAGATTTCAGTTTTCATCAAAGGGAAAAAAAATTAGGAAAAATACAAGAAATAAATTACAGTTTCGAACTATCGATACTTTTATTTTGAAGCGTCTAAAAT
CATTTCGACAATTTTTTCGTAACTTTTTCGTATGTTTTTCTTTCCAAATTATGCACGTGATTCACATTTCTTTTTCTGTACATGATTGGTTTCAATAATAAATTGCAAATTATCCTAAAA
TTTCAAAAATATATGCATATATGAAATAATCTCATTTATGCAAAAATGGAGTCTTGAAGACATGTGATATGATGAAGCGCAAATAAAAATAACAAGTCATTTCGATAATTTTTTTAATAA
TTTTTATATGTATGTCTTTTCCAAATTATTGTGATGCTTTGGTATTTAGAATTGTTCGTCAAAAAAAAAGTATGCAGGCGATTCACTTTTTGTTTTTTTTTGTTCTGTACGTGATTCATT
TCAATAACCATGGCAGCTACTGAGTATGTAGATAATAAATTGTCCTAGTCTATGCAAAAATGGAGTCTTGAAAACAAGTGATGTGACGGCGCATAAAGAAAGAATGTCAATTACGATATT
TTCCAGAAAAAAAGAACCCTAGAAATGTACTAAAATTGTATTATATGCACATATATTTTCTAATTCATATGTTGAGATTTTTTATTGAAGTGCATGGATGAGAAAAATGTGGAAAAACTT
TTGGTTTGACAATCGACAGGAATTCAACGGTCAACGGAATACGCCCAGGAGCTGCTGCGAGCGCTGCGAGGGAGAGACGGCCTCAAATCCGACATCACAAAGAGCGAACTCCACTACTTC
TGGCGCCGCCTCACCGACCCGTGCCCCGACTCCAAAATCCAGATCTTCTTCGACTTTTGTAATCAATTCAAATTCATCGCCATTTCCATGAATTATTCTGTACATTTCGATCGCGGAAAA
TACCCGTTTCTTCATTTTTAATTATATCGCGCAGGTGCGACCGAAATATGGATGGGATAGTTAGCCGGCGCGACGTCAAGCAGAGGTGCGCTGCTGCGTTCGTTTCACGGAAAATGAAAA
GGGATTTTCAGGGCACTTTAGTTTATTCTTTCTCAAGATTTCGAAACTTTGATTTGGGCAGGTGATCTTGATGAGTGCTGCCGCGAACAAGGTGAGCTTGACCGGCGAGGAGGCGGACGA
GTACACCGCCCTGATCATGGACGCCGTCGGCTCAGGAGATCGAGGTTACATAGAGAGGTGATGACGCCTTCAATGAGAGGAATGAAATGGTGGCAAAGCTCAACGTTGCCTGACTGATGT
CATGACATGTTCACTGTGCAGATATCTCAAGTGGAGACGCTGCTGAAGCTCGGGTTGTCGAAGGACTCTTCCGCCACTGCCCCGTCGCCAAGGCTGTGCTACCGCGGGGGCTGGGACTCG
GATGGGGTGGTCGGGCGGCCCATGTCGACGCTGGAGGTCTTGTTCCGGAGCTACTGGCGACGGGCGTGGATCGTGGCCCTCTGGCTGGCGATTTGCGTTGCGCTGTTCACGTGGAAGTTC
ATTCAGTATAGGCATAGGACGGCGTTCGAGGTCATGGGCTACTGCCTTTGCACCGCCAAGGGGGCTGCCGAGACCCTCAAGTTCAACATGGCCGTGATTCTCCTCCCCGTCTGCCGGAAC
ACAGTCACGTGGCTCCGCGCCAGCCGCCGGGTCAGCTCGATTGTCCCCTTCAACGATAACATCAACTTTCACAAGAGGTAGAAGAGGAGTGCGTAGTAATTCATGCAATATTCTCAACAT
TCTACCATCATATACTAGCAGCATGACTGATTCCTATCAAATAAGAACCAAGCTTCGGCTTGAGATTTCAGAAACTGGTTGATTTCATAGTGTCAAGCAACGGTCATCTCCTGTCTGATG
CAACTGTAAACACCCCGAATTCATTTATCTATGACAGTTGATCGCAGCTGGGATCGTGATCGGGGTGATCCTCCATGGTGGCACCCACTTGGCGTGCGACTTCCCTCGGATCAGTAGCTC
GGATCACTCGATCTTCCGCCAGACGATTGCTGCAGGGTTCGGCTACCATCAGCCATCGTATCTCCAGATCCTGGCCACGACGGAGGTGGCAACAGGGATCGCAATGGTGGTCCTTATGGC
AATCGCGTTCTCCCTCGCGACAAGGTGGCCAAGGCGCCAGGCCCCGCCGCTGCCCCGGTCAGTCCGGCAGGTCACGGGGTACAACACCTTCTGGTACTCACACCACCTCTTCGTCTTCGT
GTACGCACTGTTGATCGTGCACTCCATGTTCCTCTTCCTGACCAGCAACCTAATAGAAAAGACGCGGTAGGTTGCTCGGACTTTTAGATTCGTACAGAATAGTGCTGATCCGATGTCATT
GTCTCGACAAACGTATGGATTTTTCACAACTTCACTGGAGTTCTTGCTTAGAAATTAGAAGCAGTTCTCAGCATGCATCACAATTCCCACAAGAAATGCAAGAAATTTGGAGAGCTGCAA
TTTTCTACTAATATAATCTGCAATTCTGAGATTCGATTCAATGAGAATGTACACCTTTCCTAACGTCATCACTGATTCATGCATAATGCCGTTCTGGTTGCACAGACATGGATGTATATC
GCCTTTCCAGTGCTGCTGTACACGGGAGAGAGGATCTTCCGGGCTGTCAGATCGTCATTTTATGAGGTGGAGATACTGAAGAGGTATGTCAAGTCATTTACCATGCTGCGAAAATGGTTT
ACCAGACTTGTATAGATCATATGGAAATCATGTTCAGTCGGGTCTGGAATATCCTGTGGCCAGCCGACTCTCATGGAATATGTTTTCCCGTGAAACAAACGACCCTCATGTGGTATTGTT
CTGATCATGTAAACAGATAACTGCTGTATTTTCTCATGTAGGCAAATGTGTATCCAGGAAAGGTTTTGTCCCTGACAATTAGCAAGCCCGAAGGCTTTGAGTACAGAAGTGGAATGTATA
TATACATTCAATGCTCTCGTATATCACCCTTCGAATGTGGTATTCTGCATGCCTTCTTTCTTTTCAAACCGGTCGTTGCCTTGTCCCTTCCAAACTGTGACAGCTATGAGATTATCGCGA
CGCTCTCCTCGTACTTTTGCCTGTTTAAAACGACCGTGCTTTCGGTTCTATGTTGATGTCCAGGCACCCGTTTTCATTGACTTCTGGACCAGATGAAGGTCACTTGAGTGTGCACATTAG
GACACTTGGAGACTGGAGTTATCAATTATACAGTCTCTTCCAAGAGAGGTAAGGAACAAAAAGGACTCGAATCGATACTCCTCAGAAACCGGGAATCCAAATCTCTGTTGTTTTCTATGC
AGGCAACTGTGGCAAGAACAGCTAGCTATCCCAAAATGTACATCGACGGGCCTTACGGCGCAGCCTCTCAGGACTATGTCAAGTATGACGTCGTGGTTCTGGTTGGCCTCGGAATAGGAG
CAACGCCATTTATCAGCATTCTTAAGGATGTCGTCGGTTGCGATCATATGTAAGTTTCTAGGTTACACCTCCCTTGCATTGTTGCGATCATGTAAGTTTCTAGGTTACACCTCCCTTGCA
TTGTTGAATAAGATATTCAATATGCTTTATTTAACCCTGTGCTGACACAAGGTAAATGCTCGATTTACCAGGTGGATGGCGGAGAAGTTTGCACTCCGAAGGGTCCAGCGAAAGCCTATC
TGTACTGGGTTACGAGGGATCAGAGCTCCTTTGCCTGGTTCAGGGATTTCATCAAGCAGATATCGAAGACCAACCGGAAAGAGGTTACTGATTGATTCTTACGGCAGCAAGCAAAACCTG
AAAATGTCTTCAAGAAAATGAAGTTGACATGAGTCTTTATAGGCACTGATTTGATATTTGCTTGTACTTTAAAACCAAATTAGTTGTTGTTCCTTTTCAGTCGATTATGGAGATGCACAA
CTTCCTGACCTCGATGTACAAGGAGGAGGATGCACGGTCGGTGTTACTAAGCACCATTCAAGCTCTGTCTCGTGCCAAGAGCGGCATCGACTTCATCTCTCAGACCCCGCGGTTAGTCGT
TCGATCATACTCCACATCTCCACATCTGATTTCTGCATGGCAACAGCTTCCAGCTTTTCCATAAAACTTTAAGATCTTCTTGTTCTTGATTGAAAAGATGCGAAGTCGGGCAGTTAGAAG
CCCGATCAATGATCATGGTCATGAACTTTTTAGCAATCTCAGTTGGCGGTTCGTCTTTACTTGTCATCATACTAAAACCATATGTTCTTTCCGGAGTTGTGTTTGCATGTCTTAAAAGTA
CAGTCTTCTCATTAACAATGCACTCGGCATGCAGTTATGACGTAAATCTTCTTGCCATCCCTGCAAATCGATTAGCACGAATGATTATGACGAAAGCATTCGAATTCAGTTCAACCACTC
GTGAATTCATGAGAATACCTCTCGCTACAAGATCGGTTGATCTAACTTCTAATGTCATTTTCAGGTGCATACTCATTTTGCCAGACCAAATTGGTCCAGCATTTTCTCCAAGTTGTCCCG
AAGGCACGGCGGTTCCCAGATTGTGGTGAGACTTCGGCAAACCCCCTGACAACAGTACATCTTTATCATTTGCTTTCGGCATGCTTCTGTGATTCCTCTATTAGAAGGCATTCTACGGCA
TACAATTCACGGGGTCCTGATCGAACTTTAGCGCCATTGGTTGACAAACCATTTGCAAATAATTCACGATGCATCCGTTGTTAAAATCAAATTAGCTAGTGATCTCAAAAGGTGCTTGTG
GGACGGATTGCTTTTTCTCCTCGATAGGGTTATATCTTGAATCTCCGGCTTATGATTTGCAGGGGTGTTCTATTGTGGTCCTTCAGCATTAGCAGGAGAATTGGAGGAGATGTGCACCAA
ATTCTCCACCAAGACCATCACAAGATTTGTGTTCCATAAGGAGCATTAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA