View Redoxidase 10618

Entry information : EcamRboh01 (EcS536697.10)

Entry ID	10618
Creation	2012-02-29 (Qiang Li)
Last sequence changes	2012-02-29 (Qiang Li)
Sequence status	partial
Reviewer	Li
Last annotation changes	2013-05-23 (Li)

Peroxidase information: EcamRboh01 (EcS536697.10)

Name (synonym)

EcamRboh01 (EcS536697.10)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus camaldulensis [TaxId: 34316 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EcamRboh01 start..stop	S start..stop
EgrRboh01	1640	0	1..789	137..925
EguRboh01	1622	0	1..789	137..925
EglRboh01	1622	0	1..789	68..856
CglaRboh05	1351	0	9..789	139..922

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10618' 'join(1..196,323..479,1202..1250,1467..1580,1708..2130,2523..2906,3011..3106,3288..3403,3488..3658,3746..3902,3986..4174,4282..4410,4602..4680,5164..5273)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..196	194	N° 2	323..479	155	N° 3	1202..1250	47	N° 4	1467..1580	112
N° 5	1708..2130	421	N° 6	2523..2906	382	N° 7	3011..3106	94	N° 8	3288..3403	114
N° 9	3488..3658	169	N° 10	3746..3902	155	N° 11	3986..4174	187	N° 12	4282..4410	127
N° 13	4602..4680	77	N° 14	5164..5273	108
join(1..196,323..479,1202..1250,1467..1580,1708..2130,2523..2906,3011..3106,3288 ..3403,3488..3658,3746..3902,3986..4174,4282..4410,4602..4680,5164..5273)

Literature and cross-references EcamRboh01 (EcS536697.10)

Protein sequence: EcamRboh01 (EcS536697.10)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	789
PWM (Da):	90056.27	Transmb domain:	o228-250i309-328o364-386i409-431o441-455i591-608o
PI (pH):	9.44

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

EARRARAQLDRSRSSAQRALKGLRFISKANFCARDAEELWRQVEARFHRLARDGLLAREDFGECIGMDSKEFAVGMFDALARRRRQRIGKITREELHDFWLQISDQSFDARLQIFFDMAD
SNEDGRITRAEVQLLMLSASANKLSKLKERAEEYASLIMEELDPENLGYIELWQLETLLLQKDTYMNYSRTLSTTSVGWSQNLSSFRPTDKVRRICSSLRCLVLENWQRGWILLLWAIVM
GCLFAWKFIQYRNMAAFHVMGYCLATAKGAAETLKLNMALILLPVCRNTLTWLRSTRARSLIPFDDNINFHKIIACAIVIGIILHAGDHLACDFPRLVNSSPEKFALISSDFNNRKPTYT
DLLSGVEGVTGIAMLVLMAISFTLATHRFRRNIVRLPAPFNRLTGFNAFWYSHHLLGVVYVLLLIHGTFLFLVHEWYKKTTWMYISIPLLLYILERSMRACRSNHYAVRILKVSVLPGNV
FSIIMSKPQGFKYRSGQYIFLQCPTISPFEWHPFSITSAPGDDYLSVHIRTVGDWTQELKKTLTEGRDSSCVIGRAKFTSVGCINQTGQPKLLVDGPYGAPAQDYRNYDVLLLVGLGIGA
TPFVSILRDLLSNTRAEEQDSITETSRSDDSTNSFASSNVTPGSKRKSQRTSSAHFYWVTRESGSFEWFKGVMNEVAEMDHKGQIELHNHLTSVYEEGDARSTLITMVQALNHAKHGFDI
LSGTRVRTHFGRPNWREVFIKVASKHPYTTVGVFYCGMPMLAKELRKLSHELSHKTSTRFEFHKELF

Retrieve as FASTA

Remarks

Partial sequence from genomic. Incorrect prediction from kazusa. 5' end is missing.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GAGGCGCGGAGGGCGAGGGCGCAGCTGGACCGGAGCCGGTCGAGCGCGCAGAGGGCGCTGAAGGGTCTCCGGTTCATCAGCAAGGCCAACTTCTGCGCCAGGGACGCCGAGGAGCTCTGG
CGCCAGGTCGAGGCTCGCTTCCACCGCCTCGCCAGGGACGGCCTGCTCGCCCGCGAGGACTTCGGCGAATGCATCGCGGTACGTTCTCCAAATCCCATCGCCCCATTCATCGATGCATGC
GAGACGTAGTGAAATGTGTCCGGACGGGTTGCGAAGGAAGTTGACGGTTGGCGGCGGTGGTTTTGCTTTGCTGTTGGAAACCAGGGATGGACTCGAAGGAGTTCGCGGTGGGGATGTTCG
ACGCGCTGGCGCGGCGGCGGCGGCAGAGGATCGGGAAGATCACCAGGGAGGAGCTGCACGACTTCTGGCTCCAAATCTCCGACCAGAGCTTCGACGCGCGGCTTCAAATATTCTTCGACA
TATGTGGGCCCCCCTCTCCCTGTCTCTCTTTATCTCTCGATTCGTCTAGCCGTTTTGTGACCGTTCGATCGGATCGGAGCGATGGCTTCCTGGCCTCGTTGACCGTGCCTTTTCGATCGA
TCTGACGGCGGGGGATGCGGAATCCGAGGCAGGCCCGGCCGCCCCCTGGCCGCATGATCTTGCCCGAGGTTTCCGGCGGTCATCTCTCGGGATGATCGCCGGCGTATTAATAGCCTGACA
GAAAGAAAAGACGAGAAGTGTCGTTGAAGCTTTAATTTACTTGTCGGACTCTATTGATTATTATTACCCGCGAAAAATGAAGTACATTGAATGGATTTTGTCCAAATGGATTTTTGGTAG
TGAATTTCGTGATTTTGAGTGTACCCTTTTTTTGTCTTTTTACGTGTGATCAACTCGTTGAAAATTAGAATTTATACACCAAGAGTAGCGGTTACACTAAGAATAGCAGTCCTTGCTAGA
GTTATTGTTGTCTTGGTTGGGGCTTATGTCGTCGATAATTGTTGGGAATTTCTGCTTTCTTGGGTCATGAAAAAATTTAATGCTTTCATTAAAAATGGAGAGGAAAATCTTAGTTATTTT
TTTGCGTATTTGAACTAGATTTAGTGTACCTCCTCAATTTACTTGGTAATTCATGTAACTTGACAAATGCCCTAAAAGCCCTGATGAAAAGTCCTGACGTGTGTGTATCCTTTGTGCTTC
ATTAGGGCGGACAGCAATGAAGATGGGAGAATCACCAGGGCAGAAGTACAGGAGAGGTAGGACTTTGTTCTTCCTCATCTGCAATTTCGAGTTTTGTCATCACATTACTCGAGCGTTATC
AGCAGCGTGTCGTCCTTCTTTTAAGCTTGTCCATGTAGACATGAATGGTACTTCCGGCTCACTAGCGAGATGATGCATCGGTTGTAGCTAAGAAAGAATGAACTGTTTCGTTTTACCGAC
ACTTTGGAGCTTCACCAATGTCTTGATTTCAGCTTCTGATGCTCAGTGCATCAGCTAACAAGTTGTCGAAGCTGAAAGAGCGAGCGGAGGAATACGCCTCCCTGATCATGGAGGAACTGG
ACCCGGAGAACCTCGGCTACATCGAGAGGTAAAAGCCCCTGAAGCGGCAAAGCAAAACATAGATGACATAGGATATTCAACTTAGGAAAACTCTTTGCTCCATGGAAAAAGTACTAATTC
AGACAGGCTATCATTTGCCCTGTCCTCTGTTTCAGTTGTGGCAACTGGAGACTCTGCTTCTGCAAAAGGACACTTATATGAACTACAGCCGAACGCTCAGCACGACCAGTGTTGGCTGGA
GCCAAAACCTGAGCTCGTTTAGACCGACCGATAAGGTGCGGAGGATTTGCAGCTCCCTCCGATGCCTCGTGCTGGAGAACTGGCAAAGAGGTTGGATTCTGTTACTTTGGGCGATAGTGA
TGGGGTGCCTCTTCGCTTGGAAGTTCATCCAATACAGGAACATGGCAGCATTTCATGTAATGGGCTATTGCCTGGCGACGGCCAAGGGGGCAGCAGAAACTCTGAAGCTCAACATGGCTC
TCATCCTCCTGCCCGTCTGCCGGAACACCCTGACGTGGCTCCGGTCCACCCGAGCCAGGTCGTTGATTCCCTTCGATGACAACATAAACTTCCACAAGAGGTAAAAGATCTGGCGAAACA
AGTAGAAACATCATGCATAGAGTTTTGAAATGTTGGTTCTCAACATCGTATCAATTGCTCCTGGCTGAATTAAATTGGCATGATTCGAAAACATAGTTTTTCCCAAGAATGGAGCTTGAA
ATTCACTATGGCAAGTAATAGAAGTAGAAGATTTAGAAAGAAAGTCTAAAGATTTCAATGGTTGCAACTTCCAGGGAATGCAATTCCATTAACATGCATGAGCTAAAGTGCATATGAACA
TGGCAAAGATATAAAGGAAGTACAGTTGTTCAAAGTGATTATTTCAAGCACTACTGTATTTTAGACCAACTATATCTCGTGTATGCAAGAGATAATGGAATGACACTCCCGCACTTTTTT
CCCAATGCACAGATAATTGCATGTGCCATAGTCATCGGGATCATCCTTCACGCAGGAGACCATCTAGCATGTGATTTTCCCCGCCTGGTAAACTCCTCCCCAGAAAAGTTTGCCCTCATA
TCCTCTGACTTCAATAACAGAAAGCCCACATACACGGACCTTCTATCTGGAGTTGAAGGAGTGACGGGCATTGCTATGCTGGTTTTGATGGCTATCTCATTCACTCTAGCGACACACCGG
TTCAGGAGAAACATAGTGAGGCTACCTGCACCTTTCAACAGATTGACAGGCTTCAATGCATTCTGGTATTCCCATCACCTGCTAGGTGTGGTCTACGTTTTGCTGCTCATCCATGGAACC
TTTCTGTTCTTGGTGCACGAATGGTACAAGAAAACGCGGTAAGCAATCCGTCTCATTGTATATGCTGTAGTTAAGTCAAGACATCAAACTTCATCATGTATTCAATAGCACCGGTACTAA
TTCGATGCCTTACTCACCTCAGACATGGATGTACATCTCTATTCCATTGTTGCTTTACATACTTGAGAGAAGCATGCGAGCATGCAGATCAAACCATTATGCAGTTCGAATATTGAAGAG
GTAATACCTTTCTTATTTCTCTTACATTTTGACTTTTCATTGTTTGATCAAGACATAATATAATGCACAATTGAGAAAAAAATGCATCAGCGTCTTCATGCATGATCTTCGCAAAGTACA
TCGAGAAATTTGTTTTTCTGAAAAAAGCTAATTTCTTTTGGACTATGTTTGTTCTCTTCAGGTTTCGGTACTACCAGGGAATGTCTTCAGCATAATCATGTCCAAGCCTCAAGGGTTCAA
GTACAGAAGCGGGCAGTACATTTTTCTACAATGTCCGACAATTTCCCCTTTTGAGTGTGGTAAAGTCCAAAACTCATCTCACCTCCTAGCTTTTCCAACATCTGCATTTCCACCATCAAA
GGCTAAGTGCTGATACCTTCCAGGCACCCATTCTCAATTACTTCAGCACCTGGAGATGACTACCTCAGTGTTCACATCAGGACAGTTGGTGATTGGACACAGGAGTTGAAAAAAACTCTC
ACTGAAGGCAGAGACTCGTCATGTGTCATTGGCCGAGCAAAATTCACATCGGTTGGTTGTATCAATCAGACAGGGGGTAATTATGTTTCTGGCAGGCTTAAGTTCCGAAATAGAAACTAT
TCTAGGTAATGCTAACTGAACAAACTGTCATGTCATGATGCAGCCAACCCAAATTGCTCGTCGATGGTCCATACGGAGCTCCAGCTCAGGACTACAGAAATTATGATGTACTTCTCCTCG
TGGGGCTTGGCATTGGTGCAACCCCTTTTGTAAGCATCCTTAGAGATCTTCTGAGTAATACAAGAGCAGAGGAGCAAATGTGGTACAGTATGTTGCTAATATATGAACAACGTGTCTTCA
AATTTAGGAAACACATCCTAAACTTTTGCTATTGTGATGAACTAGGATTCAATCACAGAGACCAGTAGATCTGATGATAGCACAAATAGTTTCGCATCTTCAAACGTGACACCAGGCAGC
AAAAGAAAGTCACAGAGGACGTCCAGTGCTCATTTCTACTGGGTGACTAGGGAATCCGGGTCGTTCGAGTGGTTCAAAGGAGTCATGAATGAAGTTGCAGAAATGGATCACAAAAAGTAA
AATTCTTCTGAACATTGCTCATGACTGTTTAGTGCACGTGTAGAAGGAACTAAATGAGCGGGCTAAGAGACCCTATGTCTTCTCTCTCTTTCTGTATGAGCAGGGTCAAATTGAGCTTCA
CAATCACCTTACCAGTGTCTATGAAGAGGGAGATGCAAGGTCAACTCTAATCACCATGGTCCAGGCTCTCAATCATGCCAAACACGGTTTCGACATCCTATCGGGGACACGGGGGTATAA
TATGATGTCTACATAACAATGCCACATTCCGTTACGTTACCATGTTAACAATGAACACGCTACCGAGACAATTGACTAGAGACACTATAGATAGAATATTCTTCTCTATTTTTTAGCTCG
TTTGTTAAAGTGAACTGCTTCAACCGTGAGGCTGCTAACTCAGTCCTGATATTCGATACTTGCAGGTAAGAACACACTTTGGAAGACCGAATTGGAGAGAGGTATTTATCAAAGTAGCTT
CAAAGCATCCATACACTACAGTAGAGGTAAGTGTAAAACAAGAAAGCATTAGTACTTGCTGACAAATTTCATAACAATCAAACTAAGTAGTTCAGATCCCAGATACAATGAAATTACAAA
AACTAGCTTCATTTGTTGCTGGTAATTAATCCTGAAATCATCATACAGGTAGAGCTCAGCACAATAGCCTTCTGATATTAACAATAACTAGACAAGACTTACAAATTGACATTAGGTCAG
ATGTAACTTCTGCAAATAAAAGACTTGTTTTTAAACTTGTAGGAGACCCTTATACGCACTCTGTGGCCAAGTCTACATCAGAAAATAATGCGAAGGATCAAAATATAAGATCTTAACTTC
TGCGTAAATTATATAATAAAACCCTTTGACTAGGAAAGTAAAACCATCTCCTTAACGTAATGAAACTCTACAGTGTTTGCTGAATCTGCAACTGTGCAAGATACTGACGTTTCAATGATG
TCTGAACGAAAGGGGTTTTTCTATTGCAGGGGTGTTCTACTGCGGGATGCCGATGTTAGCAAAGGAATTAAGGAAGCTATCGCATGAGCTGAGTCACAAGACATCTACACGTTTCGAATT
CCACAAGGAGCTTTTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA