Entry information : OsPrx52(LOC_Os04g01550)
Entry ID 1062
Creation 2006-07-17 (Filippo Passardi)
Last sequence changes 2014-01-08 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2022-02-10 (Christophe Dunand)
Peroxidase information: OsPrx52(LOC_Os04g01550)
Name OsPrx52(LOC_Os04g01550)
Class Class III peroxidase    [Orthogroup: Prx016]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx52
start..stop
S start..stop
TaPrx211-1D 434 4.71e-154 35..330 41..335
TaPrx211-1A 429 4.49e-152 35..330 49..343
SiPrx58 397 2.37e-139 35..331 36..330
SbPrx89 389 8.24e-137 35..332 10..311
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1062' 'complement(join(365952..366710,366777..366931,367536..367618))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 367536..367618 81 N° 2 366777..366931 153 N° 3 365952..366710 757  
complement(join(365952..366710,366777..366931,367536..367618))


exon

Literature and cross-references OsPrx52(LOC_Os04g01550)
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB:   Q5U1P1
DNA ref. GenBank:   NC_008397.1 (367615..365952)
Protein sequence: OsPrx52(LOC_Os04g01550)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (326)
PWM (Da):   %s   35543.12 (35497.8)  
PI (pH):   %s   4.49 (5.21) Peptide Signal:   %s   cut: 29 range:29-354
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGVGGTADEEANRWMLRRAAMENGEDACCRSPSPEVGYYGATCPDADAIVRQVMERRFYNDNTIAPAIIRMLFHDCFVTGCDASLLIVPTPTRPSPERVAIPNQTLRALNIVNAVKSALE
AACPGVVSCADALALMARDSFALLGGTAYDVALGRRDALHSNSWEDDLPAPFSSLDDTLRHFAAKGFTADETVLLFGAHTVGAAHCSSFRYRLARPDDGTMDESLRCDMVGVCGLADQPA
AADYAMTFLDPVTPFAVDNAYYAQLMSNRSLLQVDQEAATHAATAGYVAYYAANPDAFLQRFSEVMAKLGTVGVLEGDAGEVRTVCTKYNTS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, intron 5' and 1). No EST. Incorrect prediction from Phytozome (part of the first intron is missing). Containing IntR (5').
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGTGGGCGGCACCGCTGACGAGGAGGCCAACCGTTGGATGCTACGGCGGGCGGCAATGGAGAACGGCGAGGACGGTGGATCTGGCGCTGCCGCCCATCGGGAGGGCCGGATCCAT
CGCCCTTGGGTGCGGCTGCGGCCTCTGCGATAGCATGCGGCGGATCCGACGACGCCGTCCTCGGGTACGTCTGCGAACGGCGGGCGGATCCAGCAGGCAGCAGCTGCTCCTACCCCCAAC
CGTATTGGAAGATTTGATTTTGATCATTTGGGAAAATCTCTTTTGTAGTACTAATGCATATACATGTAATTAATTAAGGGTACGGTGTGGTATGACTTCGAAGCAACCGGCCAATCTCTA
GCTTAACTAGAAGTAGATTAGCATATTACCGATATGATTAGCCGTGCAGCTTGGTAAGTCGTGTTCGTCGTCGTGCAAAAACTGGCACTACAGCTGGATCAAACTGGTACACACGCGTCT
TAACTGAATATCGAATAAAATTAGATCTTATACGAAGATCGAGAGAGTATTAAACTAGCTAGCTATAGCTAAGGTGTCGGCGATGCATGAGATCGATCATGTTGTCTTGTGAGAAGATGC
ATACTAATTAAGCTAGTACTTGACAGCAAGCTAATTAAGCTAGCCATGAGACGCCGCCATGCAGGTGTGCTCCTGATCCTGCAGCTGCACAGATCGCCGTCGCCGGAGGTGGGGTACTAC
GGCGCGACGTGCCCGGACGCCGACGCCATCGTGCGGCAGGTGATGGAACGCCGCTTCTACAACGACAATACCATCGCCCCCGCCATCATCCGCATGCTCTTCCACGACTGCTTCGTCACC
GTAC
GTACGTGCCATCGATCTGGAGTAGCTAGCTAGGGTTCGTTCATCATATGTTTCATGGCTGCAGGGTTGTGCGACGCTTCTCTGCTCATCGTCCCCACGCCGACGCGCCCGTCGCCG
GAGCGGGTGGCCATCCCCAACCAGACCTTGCGCGCCTTGAACATCGTCAACGCCGTCAAGTCCGCCCTCGAGGCCGCCTGCCCGGGCGTCGTCTCCTGCGCCGACGCGCTCGCCCTCATG
GCGCGGGACTCCTTCGCCCTCCTCGGCGGCACCGCCTACGACGTCGCGCTCGGCCGCCGCGACGCCCTCCACTCCAACTCCTGGGAGGACGACCTCCCGGCGCCCTTCTCCTCCCTCGAC
GACACGCTCCGCCACTTCGCCGCCAAGGGCTTCACCGCCGACGAGACCGTCCTCCTCTTCGGCGCCCACACCGTCGGCGCCGCGCACTGCTCCTCCTTCCGCTACCGCCTCGCCAGGCCG
GACGACGGCACCATGGACGAGAGCCTCCGCTGCGACATGGTCGGCGTCTGCGGCCTCGCCGACCAGCCGGCGGCGGCCGACTACGCCATGACCTTCCTCGACCCCGTCACGCCCTTCGCC
GTCGACAACGCCTACTACGCGCAGCTCATGAGCAACAGGAGCCTCCTGCAGGTGGACCAGGAGGCCGCCACGCACGCCGCCACGGCGGGCTACGTCGCCTACTACGCGGCCAACCCCGAC
GCCTTCCTGCAGAGGTTCTCGGAGGTGATGGCCAAGCTCGGGACGGTCGGCGTGCTCGAGGGCGACGCCGGCGAGGTCAGGACAGTCTGCACCAAGTACAACACTAGCTAG

Retrieve as FASTA