Entry information : ZmaPrx10 ( Zosma538g00010 [2.2])
Entry ID 10620
Creation 2012-02-29 (Qiang Li)
Last sequence changes 2016-04-08 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-04-08 (Achraf Jemmat)
Peroxidase information: ZmaPrx10 ( Zosma538g00010 [2.2])
Name (synonym) ZmaPrx10 ( Zosma538g00010 [2.2])
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Zosteraceae Zostera
Organism Zostera marina    [TaxId: 29655 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmaPrx10
start..stop
S start..stop
ZmaPrx38 528 0 1..317 1..318
PtaPrx18 443 5e-158 1..317 7..318
PabPrx111 442 6e-158 12..317 10..315
PtaPrx64 438 3e-156 18..317 19..318
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 21084..21293 210 N° 2 20801..20992 192 N° 3 20562..20727 166 N° 4 20085..20470 386
complement(join(20085..20470,20562..20727,20801..20992,21084..21293))


exon

Literature and cross-references ZmaPrx10 ( Zosma538g00010 [2.2])
DNA ref. Phytozome 12:   scaffold_538 (21293..20085)
Cluster/Prediction ref. Phytozome Gene 12:   33174283
Protein sequence: ZmaPrx10 ( Zosma538g00010 [2.2])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (294)
PWM (Da):   %s   33774.35 (31211.1)  
PI (pH):   %s   4.64 (4.64) Peptide Signal:   %s   cut: 24 range:24-317
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSNVLVTLFLFSFSFFSVPSAADLSASFYETSCPDALSTIKSAVVSAVSKEKRMGASLLRLHFHDCFVNGCDGSVLLDDTSTFTGEKTAPPNNNSLRGFDVIDTIKSDVESVCAQTVSCADIVAVAARDSIVALGGPNYDVLLGRRDSTTASFAAAKSDIPPPSSSLSSLISSFSVKGLSTNDMIALSGAHTIGKARCVSFRPHIYNDTNINDSYAEKLQENCPESGDDNNLASLDVSTDDVFDNYYYKNLKVEKGLLHSDQVLYNNGSADSQVSKYSSDSAQFFSDFTAAMINMGNISPLTGSSGQIRTNCRKAN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTCCAACGTCCTAGTTACACTCTTCCTTTTCTCTTTCTCCTTCTTTAGTGTCCCATCGGCAGCCGATCTCTCGGCGAGCTTCTACGAGACATCCTGCCCGGATGCTCTTTCGACG
ATCAAATCAGCTGTGGTATCTGCAGTGTCGAAAGAGAAACGTATGGGAGCATCTTTGCTCCGTCTCCATTTCCATGATTGCTTCGTTAAT
GCAAGTCTAGTCAATAAAGAATAAATTACA
TGCATGAACGCGTGTATGATTGCATGATAATTATTAACTAGTAACATTTGACGTTCAACAGGGATGTGATGGTTCGGTTCTCTTAGATGACACGTCAACTTTCACGGGAGAGAAAACTGC
ACCGCCTAATAATAATTCCCTCAGAGGATTCGACGTCATCGACACCATCAAATCCGACGTCGAGAGCGTGTGTGCTCAGACAGTATCCTGTGCGGATATCGTTGCCGTAGCCGCTAGAGA
CTCTATTGTTGCA
GTAAGTGTGACATATATACCAGCCAGATTTTAGGTTTTGCAGGTTTCTCTAATATATATATGTACGCATGCAGTTGGGTGGTCCAAATTATGATGTGCTGCTGGGAA
GAAGAGATTCCACCACGGCAAGCTTTGCTGCGGCTAAGAGTGATATTCCTCCACCATCTTCTAGTCTCAGTTCGCTCATATCTTCTTTTTCCGTCAAGGGTCTATCCACCAATGATATGA
TCGCACTTTCCG
GTGAGCTAGCTTGCTAGCGCTGACCAACTTGATTAATTTCAGAATATCAATTGCTTAACTGTAGATTTCTTGGCATTAATCGATTGATCAGGTGCACATACCATAGGA
AAGGCAAGATGTGTAAGTTTCCGTCCACATATTTACAACGATACGAACATAAATGACAGCTATGCCGAAAAACTACAAGAGAATTGCCCGGAGTCGGGGGATGACAACAACCTTGCTTCG
CTTGACGTCTCAACCGACGATGTATTCGACAACTATTACTACAAGAATCTTAAGGTTGAGAAGGGACTTCTGCACTCAGACCAGGTGCTGTACAACAATGGATCTGCAGACTCTCAGGTT
AGCAAATACAGCTCCGACAGTGCTCAGTTCTTCTCCGACTTTACTGCCGCCATGATAAATATGGGAAATATAAGCCCACTCACCGGAAGCAGTGGTCAGATCAGGACAAATTGCAGGAAA
GCTAATTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTCCAACGTCCTAGTTACACTCTTCCTTTTCTCTTTCTCCTTCTTTAGTGTCCCATCGGCAGCCGATCTCTCGGCGAGCTTCTACGAGACATCCTGCCCGGATGCTCTTTCGACG
ATCAAATCAGCTGTGGTATCTGCAGTGTCGAAAGAGAAACGTATGGGAGCATCTTTGCTCCGTCTCCATTTCCATGATTGCTTCGTTAAT
GGATGTGATGGTTCGGTTCTCTTAGATGAC
ACGTCAACTTTCACGGGAGAGAAAACTGCACCGCCTAATAATAATTCCCTCAGAGGATTCGACGTCATCGACACCATCAAATCCGACGTCGAGAGCGTGTGTGCTCAGACAGTATCCTGT
GCGGATATCGTTGCCGTAGCCGCTAGAGACTCTATTGTTGCA
TTGGGTGGTCCAAATTATGATGTGCTGCTGGGAAGAAGAGATTCCACCACGGCAAGCTTTGCTGCGGCTAAGAGTGAT
ATTCCTCCACCATCTTCTAGTCTCAGTTCGCTCATATCTTCTTTTTCCGTCAAGGGTCTATCCACCAATGATATGATCGCACTTTCCG
GTGCACATACCATAGGAAAGGCAAGATGTGTA
AGTTTCCGTCCACATATTTACAACGATACGAACATAAATGACAGCTATGCCGAAAAACTACAAGAGAATTGCCCGGAGTCGGGGGATGACAACAACCTTGCTTCGCTTGACGTCTCAACC
GACGATGTATTCGACAACTATTACTACAAGAATCTTAAGGTTGAGAAGGGACTTCTGCACTCAGACCAGGTGCTGTACAACAATGGATCTGCAGACTCTCAGGTTAGCAAATACAGCTCC
GACAGTGCTCAGTTCTTCTCCGACTTTACTGCCGCCATGATAAATATGGGAAATATAAGCCCACTCACCGGAAGCAGTGGTCAGATCAGGACAAATTGCAGGAAAGCTAATTAA

Retrieve as FASTA