Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
244 |
PWM (Da): |
28474.96 |
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PI (pH):
| 6.61 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
PKSHVQENWR ILDFFSHHPE SFRMFTFLFD DIGIAQDCRH MEGSGVNTYT LINKARKAHH VKFHWKITCG AKSLLEEEAI RVGGFNHSHK TQDLYDSIAA GNYPEWELFI QIVDPDHEDK
FDFDPLDVTK TWPEDILPLM PVRRLVLNRN IDNFFAENEH LAFCPSIVVP GVYCLDDWLL QTRMFSYSDT HRHRLGPNYL QLPxxNALKC AYNNNHHEGF MNFMHRDEEV RAQRYSQVRI
SRFP
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Incorrect prediction from kazusa (PS due to short contig). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCCAAATCCC ACGTCCAGGA GAACTGGAGG ATCCTTGACT TTTTCTCCCA CCATCCCGAG AGCTTTCGCA TGTTCACCTT CCTCTTTGAT GACATTGGTA TTGCACAAGA TTGCAGGCAC
ATGGAGGGCT CTGGAGTTAA CACCTACACT TTGATCAACA AGGCTAGAAA AGCGCATCAT GTGAAGTTCC ACTGGAAAAT AACTTGCGGG GCCAAGAGCT TGCTGGAGGA AGAGGCAATT
AGAGTTGGTG GATTCAATCA CAGCCATAAA ACTCAGGATC TTTATGATTC CATTGCTGCC GGAAACTATC CTGAATGGGA ACTTTTCATT CAGATTGTCG ATCCTGATCA TGAAGACAAA
TTCGACTTTG ACCCACTTGA TGTGACTAAG ACCTGGCCCG AAGACATATT GCCCCTAATG CCAGTTCGCC GCTTGGTCTT GAATAGGAAC ATTGATAACT TCTTTGCTGA GAATGAACAT
CTTGCATTTT GCCCTTCAAT TGTGGTTCCC GGCGTCTACT GCTTAGATGA TTGGCTGCTT CAAACTCGTA TGTTCTCATA TTCTGATACC CACAGGCACC GCCTTGGACC AAATTATCTT
CAACTCCCCC TnnnnAATGC TCTTAAATGT GCTTATAACA ATAATCACCA CGAAGGTTTC ATGAATTTCA TGCATAGGGA TGAAGAGGTA AGAGCGCAGC GATACTCACA GGTAAGAATT
TCACGCTTTC CT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCCAAATCCC ACGTCCAGGA GAACTGGAGG ATCCTTGACT TTTTCTCCCA CCATCCCGAG AGCTTTCGCA TGTTCACCTT CCTCTTTGAT GACATTGGTA TTGCACAAGA TTGCAGGCAC
ATGGAGGGCT CTGGAGTTAA CACCTACACT TTGATCAACA AGGCTAGAAA AGCGCATCAT GTGAAGTTCC ACTGGAAAAT AACTTGCGGG GCCAAGAGCT TGCTGGAGGA AGAGGCAATT
AGAGTTGGTG GATTCAATCA CAGCCATAAA ACTCAGGATC TTTATGATTC CATTGCTGCC GGAAACTATC CTGAATGGGA ACTTTTCATT CAGATTGTCG ATCCTGATCA TGAAGACAAA
TTCGACTTTG ACCCACTTGA TGTGACTAAG ACCTGGCCCG AAGACATATT GCCCCTAATG CCAGTTCGCC GCTTGGTCTT GAATAGGAAC ATTGATAACT TCTTTGCTGA GAATGAACAT
CTTGCATTTT GCCCTTCAAT TGTGGTTCCC GGCGTCTACT GCTTAGATGA TTGGCTGCTT CAAACTCGTA TGTTCTCATA TTCTGATACC CACAGGCACC GCCTTGGACC AAATTATCTT
CAACTCCCCC TnnnnAATGC TCTTAAATGT GCTTATAACA ATAATCACCA CGAAGGTTTC ATGAATTTCA TGCATAGGGA TGAAGAGGTA AGAGCGCAGC GATACTCACA GGTAAGAATT
TCACGCTTTC CT
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Retrieve as FASTA
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