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Entry information : JargLDS02
Entry ID 10656
Creation 2012-03-02 (Christophe Dunand)
Last sequence changes 2012-03-02 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2015-12-11 (Catherine Mathe)
Peroxidase information: JargLDS02
Name JargLDS02
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Jaapiaceae Jaapia
Organism Jaapia argillacea    [TaxId: 202697 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value JargLDS02
start..stop		 S start..stop
PplLDS02 1165 0 61..1039 1..994
LbiLDS02 1148 0 30..1040 18..1018
PinvLDS02 1111 0 38..1042 56..1056
SlutLDS02 1085 0 38..1043 56..1069
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10656' 'join(301862..301948,302004..302045,302097..302153,302212..302293,302346..302557,302616..302680,302734..302950,303013..303249,303311..303373,303430..303531,303586..303665,303732..303794,303852..303975,304033..304048,304098..304247,304299..304716,304769..305003,305059..305144,305200..305320,305377..305545,305598..305720,305778..305807,305863..305939,305988..306077,306138..306217,306275..306365,306420..306434)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 301862..301948 85 N° 2 302004..302045 40 N° 3 302097..302153 55 N° 4 302212..302293 80
N° 5 302346..302557 210 N° 6 302616..302680 63 N° 7 302734..302950 215 N° 8 303013..303249 235
N° 9 303311..303373 61 N° 10 303430..303531 100 N° 11 303586..303665 78 N° 12 303732..303794 61
N° 13 303852..303975 122 N° 14 304033..304048 14 N° 15 304098..304247 148 N° 16 304299..304716 416
N° 17 304769..305003 233 N° 18 305059..305144 84 N° 19 305200..305320 119 N° 20 305377..305545 167
N° 21 305598..305720 121 N° 22 305778..305807 28 N° 23 305863..305939 75 N° 24 305988..306077 88
N° 25 306138..306217 78 N° 26 306275..306365 89 N° 27 306420..306434 13  
join(301862..301948,302004..302045,302097..302153,302212..302293,302346..302557, 302616..302680,302734..302950,303013..303249,303311..303373,303430..303531,30358 6..303665,303732..303794,303852..303975,304033..304048,304098..304247,304299..30 4716,304769..305003,305059..305144,305200..305320,305377..305545,305598..305720, 305778..305807,305863..305939,305988..306077,306138..306217,306275..306365,30642 0..306434)


exon

Literature and cross-references JargLDS02
DNA ref. JGI genome:   scaffold_4 (301862..306434)
Cluster/Prediction ref. JGI gene:   203950
Protein sequence: JargLDS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1043
PWM (Da):   %s   115065.73  
PI (pH):   %s   6.11
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSTPIARKLDDHPEDHGVQKIIRDFREQIRKGFPVPLDLSSLSSVVDAIRHSDAIDDRKMLLEHVLMLMSRLPPGSILTKLQNATVELLYNDLPHPPASYIGPEYAYRTADGSNNNIEA
PDMGKAGTPYSRSVQQQKALPSHVLPDPGLVFDVLLKREGFVKHPAGLSSLFFSFAALVIHTVFRTSHANVNINETSSYVDLAPLYGNNQESQNKVRVRDGRGLMHPDVFAEDRLLLLPP
AVCVLLVLFNRNHNYIAKKLLEINERGTYIDPATIPLDDPERNSKLLDQEEDIFQTARLINVAWFGGVVFSDYFSCILGLVRQGSSWSLNPFGEIRNEDRTLFERGRGNACSVEFNCLYR
WHATTSAEDEKWVELVFKKLFPTKTYDQVSPMDFKATAKAMEAMEPDCTHWTFGNLQRQADGTFKSEDLANFLFNATEHPAAAFRGRGTPPVMRLNEIMGIEQSRKWGCCSLNDFRSFLG
LKRYASFREWNPNPEIADAAEKLYGQIDNLELYVGLQAEEAKPLIDGAGLCPGYTISRAILSDAIALTRGDRFFTADFTPFNLTAWGFADCQRDTSGPGFGSMLGRLFLRALPDNCEAES
TYTWFPLMTPDSMKGYLQKLEVAGQYSFSRPTGETPLRVVEDYKEIQTVLKSPDGYKVASASLADSLVDGAGFYLASSDPVRSAREQRDVLRALGDTAQATDRIAQFFYQKTKELITTRS
YALVGGKTKCIDIVGDVLKAVPLQWVASEISGFELKKAKDGPGLYTEAQLYDILGNIYGHLFLDSDPSKAISQKIQVKSQVKELVNHIKENLPASVSGRLSLVGLLDQFSQLFKTYPKSA
REQFAEGLSELGLSADKIANSILAVMVGATIELSQSLVHVINAYLGDEKTPVSTPSGFGAASTASSAIKGYVFEALRLDPPFAGVYREVAGPSVSAAKTQRLFLDIAKAGNEAGLAAQGD
GPASYLLGDGCARFLGVELTSKILTSVLRAISEFNNVRRAPGISGQLKRFPANANRAVRWEYLNDSQQASPWPTAMLVQFDLA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (26 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCAACTCCCATTGCCCGCAAGCTCGACGACCATCCCGAGGACCATGGTGTGCAGAAGATCATCAGGGACTTCCGTGAACAGAGGTTTGTCGATGTCGTCAGGAACTTACTGGAG
GATTCGTGCCTGATCACCAAATAGATCAGGAAGGGCTTCCCCGTTCCCCTCGACTTGTCATCACTGTGGTGAGTTCACTTGAACGTCTGTGATAAAGTTGACTCAAGCTTCCAATGTAGA
GTTCAGTGGTAGACGCGATCAGGCATAGCGATGCCATTGATGACCGAAAGATGTTGTGGTGCGTAATGGATGCATCTTATCCGCCATACCATCTCTGATGTCATCTCCCAACCCAGCTCG
AGCACGTCCTGATGTTGATGTCACGCCTTCCACCGGGGTCTATTCTGACGAAGCTCCAAAACGCTACCGTTGAGCTTTTTGTACGTTACTGCTGTGATCCATTACCCTTATTGGGCGCTT
ATCTTTGGCCAGTGTATAACGACCTCCCCCATCCTCCCGCTTCCTACATCGGTCCTGAATACGCGTACCGTACCGCTGATGGGTCGAACAACAATATCGAGGCCCCCGACATGGGCAAGG
CCGGCACGCCGTACTCGAGGAGCGTTCAGCAGCAGAAGGCTCTTCCGAGCCACGTTCTACCAGACCCTGGCCTTGTATTCGATGTTTTACTGAAGAGAGAAGGGGGGTACGTCTCCAGAA
ATATCAACCTTGGAATCTCATCTAATGAAAATGGCATGGTGTAGTTCGTCAAGCACCCGGCTGGCCTTTCCAGTCTCTTCTTCTCGTTCGCTGCCCTCGTCATCCACACACGTTAGTACT
CTTTCGTTCCTCTATTCTCTCTGTGCTGAATTGAGCTGCGACAGTGTTTTCCGCACCTCCCACGCCAACGTCAATATCAACGAAACCTCGTCATACGTTGACTTGGCTCCATTATACGGA
AACAACCAGGAATCCCAGAACAAAGTCCGCGTCCGTGATGGACGTGGTCTCATGCATCCCGATGTCTTCGCAGAGGATAGGCTGTTACTTCTCCCCCCAGCCGTTTGTGTACTCTTGGTG
CTCTTCAATCGTAACCACAACACGTCAGTCCAATCCCCTTGTGTGGTTTTGGGTGCTGGGGCTATGACTCACCTCAACCGCACAGTACATTGCTAAGAAGCTTCTGGAGATAAATGAACG
CGGGACCTACATTGATCCTGCCACAATCCCCCTTGACGACCCCGAGAGGAATTCGAAGCTCCTGGATCAGGAAGAAGATATCTTCCAGACTGCTCGTTTAATTAACGTTGCGTGGTTTGG
AGGTGTTGTCTTCTCTGATTACTTCAGCTGTATCTTGGGTTTGGTGAGGCAAGGTAGCAGTTGGAGTTTGAATCCGTTTGGTGTGTAAGACTTATTATCTGGCGAACGTTTGATTTTATT
CTGATTGTTTGGTGCTGCCATTTAGGAAATTAGGAACGAAGACCGCACTCTGTTCGAGCGTGGCCGCGGTAACGCTTGCAGCGTCGAGAGGTATGTATTCCTTGCTTTTAGCTCTTTTTG
CGTCATTGACATTGTTTTCTACAAAGTTCAACTGCTTGTACCGCTGGCATGCAACTACCTCTGCGGAAGATGAGAAGTGGGTTGAATTGGTATTCAAGAAATTGTTCCCCACGAAAACAT
ACGACCAGAGGTGAATTTCTATGTTGTTTCGTGGTAAAGTCGACGAGCTAAGTTGTGTATGAAGGTGTCTCCTATGGACTTCAAAGCCACGGCGAAGGCCATGGAGGCTATGGAGCCTGA
TTGCACCCACTGGACATTTGGAAAAAGTGAGGAAATGATCACATTCTATCGAGCTTTTCTGAGGTGGTTTGCTAATATGTTCCGACGTATAGCCTTCAGCGTCAAGCAGATGGTACGTTC
AAAAGCGAAGATTTGGCGAACTTCCTCTTCAACGCGCGTACGTTTGCAGCGTTATATCGCCCCGATATCCTTATCGATCTTTCTTCTACGCTAGGACCGAGCACCCTGCTGCTGCCTTCA
GAGGTCGCGGCACACCCCCAGTTATGCGACTGAATGAGATCATGGGCATTGAGCAAAGCAGGAAGTGGGGATGCTGTTCGTTGAATGATTTCAGAAGTGTGTCAGTACCTGTCACTTGAT
TTTCATTTCCACATCTCTGACACCCAGCGCAATATAGTTCCTTGGCTTGAAGAGAGTATGTTGAACCATGTCTGCGGCCTGCAAGTTCTCATATTTGATCTTAGGATATGCCAGCTTCCG
GGAATGGAACCCCAACCCTGAGATCGCTGACGCTGCGGAGAAGTTGTATGGTCAAATCGACAACTTGGAACTCTATGTCGGCCTCCAAGCCGAAGAAGCCAAACCACTGATAGACGGTGC
TGGACTCTGCCCTGTGGTCAGCTTGTCTTTTTTGCCCTCTCACATACCTCGTCTAACATCCCCTCAGGATATACCATCAGTCGTGCCATCCTAAGCGATGCTATCGCTCTCACTAGAGGC
GATCGTTTCTTCACTGCAGACTTTACCCCATTCAACCTGACCGCCTGGGGTTTCGCTGATTGTCAGCGTGATACTTCTGGCCCTGGTTTCGGCAGTATGCTTGGTCGTCTCTTCTTGCGA
GCCCTCCCGGACAACTGCGAGGCGGAAAGCACTTATACTTGGTTCCCCCTGATGACTCCCGATTCTATGAAGGGCTATTTACAGAAGTTGGAGGTTGCAGGCCAGTATTCGTTCTCTCGT
CCTACTGGCGAGACCCCTCTTCGTGTTGTTGAGGATTACAAGGAGATTCAGACCGTGTTGAAGAGTCCTGACGGCTATAAGGTCGCCAGCGCCTCTCTGGCAGACTCGTTGGTTGACGGC
GCCGGGGGTACGTGGTTGTAACTTTTAGCATCGTGCCGCTCTCTCATGGCCTCGAACAGTTTCTACCTTGCCTCCTCCGATCCTGTTCGCTCTGCTCGCGAGCAACGTGACGTACTCCGT
GCTCTGGGTGATACAGCTCAAGCCACCGACCGCATTGCTCAGTTCTTCTATCAGAAGACCAAGGAGCTGATTACTACTCGGTCCTACGCCCTTGTTGGAGGCAAGACGAAGTGCATCGAT
ATTGTTGGTGATGTTCTGAAAGCCGTCCCTCTTCAATGGGTTGCATCCGAGATTTTGTGAGTGCATTGCTCGATCGCGACATCTTCCCAACTCAATAGGCCTACTCTTTAGTCTGGGTTT
GAGTTGAAGAAGGCGAAGGACGGCCCTGGGCTCTACACTGAAGCTCAGCTGTACGACATTCTGGGGAATATCTATGGGGGTATGTTAAGGATATTATTTCGTTTCATTTCCATTCAACTC
ATGCTCGTCTCTAGTCATCTCTTCCTGGACTCTGATCCATCCAAGGCTATCTCCCAAAAGATCCAAGTGAAATCCCAAGTCAAGGAGCTCGTGAACCATATCAAGGAGAACCTCCCCGCT
AGTGTTAGCGGCCGAGAGTGAGCAACTTTACTCTTCCGTCTCTATTGGAACTCATGTCATCCAACCGACGTAGTTGTCGCTTGTGGGTCTACTGGACCAATTCTCCCAGTTATTCAAGAC
TTATCCCAAGAGTGCGCGAGAGCAATTCGCGGAGGGTCTCTCGGAGTTGGGTTTGTCCGCGGACAAGATTGCGAATTCAATTCTGGCCGTGATGGTTGGAGCTACGATCGAACTATCACA
AAAAGTACGTGCCTCCATCGAGTTTAGTCGGCCATTTGTTGACGTAGACATGATAGGCTTGGTCCACGTCATCAATGCATATCTCGGTGATGAGAAAACGCCAGTGAGCACGCCATCTGG
ATTTGGTGCTGCTTCTACAGCATCATCGGCTATCAAGGGGTATGTTTTCGAAGCACTCCCCGTAAGCCCTGCTTCCATCGTCGACGGTCTGAGGCTGATTGACATTGGATGGCGGTAGGA
CTTGACCCTCCTTTCGCTGGGGTTTATCTCGTGAGTGATGAGTCTTAATCGTGATATGTCATAAATAACAATAATGGATGAACAGGTGAAGTCGCGGGGCCGTCCGTAAGTGCTGCGAAG
ACCCAGCGCTTGTTTTTGGATATCGCAAAAGCTGGCAACGAGAGGTTGGTCTTTTTGATGGATGTTTGATCAACAAGCTGACACAGGAGCAGGCCGGCCTTGCTGCGCAAGGTGATGGTC
CAGCTAGTTATCTTTTGGGCGATGGTTGTGCACGGTTCTTGGGAGTGGAGCTCACATCCAAGAGGTCGCTATTTTCCTAATCTTGATGTGATGGCAGCCCTCTCATTGTCTTTTCGGTGA
CCAGATCTTGACGTCCGTCCTTCGGGCTATCTCCGAGTTCAACAATGTTCGCCGGGCACCAGGCATTTCGGGTCAACTCAAACGCGGTGAGTCAGAGGACAGGTAATCATTCACACCGTT
CTGATCGGTTTTCTACTCGCTAGTTTCCCGGCCAATGCGAACCGCGCCGTGCGTTGGGAGTACCTAAACGACAGTCAACAAGCGTCGCCTTGGCCCACCGCGATGCTCGTGCAGAGGTGT
GTACCATTCTGATGCGTTTCCAAGTTTCTCTCATTCATTTACGCCACCAGTTTGACCTCGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCAACTCCCATTGCCCGCAAGCTCGACGACCATCCCGAGGACCATGGTGTGCAGAAGATCATCAGGGACTTCCGTGAACAGATCAGGAAGGGCTTCCCCGTTCCCCTCGACTTG
TCATCACTGAGTTCAGTGGTAGACGCGATCAGGCATAGCGATGCCATTGATGACCGAAAGATGTTGCTCGAGCACGTCCTGATGTTGATGTCACGCCTTCCACCGGGGTCTATTCTGACG
AAGCTCCAAAACGCTACCGTTGAGCTTTTGTATAACGACCTCCCCCATCCTCCCGCTTCCTACATCGGTCCTGAATACGCGTACCGTACCGCTGATGGGTCGAACAACAATATCGAGGCC
CCCGACATGGGCAAGGCCGGCACGCCGTACTCGAGGAGCGTTCAGCAGCAGAAGGCTCTTCCGAGCCACGTTCTACCAGACCCTGGCCTTGTATTCGATGTTTTACTGAAGAGAGAAGGG
TTCGTCAAGCACCCGGCTGGCCTTTCCAGTCTCTTCTTCTCGTTCGCTGCCCTCGTCATCCACACTGTTTTCCGCACCTCCCACGCCAACGTCAATATCAACGAAACCTCGTCATACGTT
GACTTGGCTCCATTATACGGAAACAACCAGGAATCCCAGAACAAAGTCCGCGTCCGTGATGGACGTGGTCTCATGCATCCCGATGTCTTCGCAGAGGATAGGCTGTTACTTCTCCCCCCA
GCCGTTTGTGTACTCTTGGTGCTCTTCAATCGTAACCACAACTACATTGCTAAGAAGCTTCTGGAGATAAATGAACGCGGGACCTACATTGATCCTGCCACAATCCCCCTTGACGACCCC
GAGAGGAATTCGAAGCTCCTGGATCAGGAAGAAGATATCTTCCAGACTGCTCGTTTAATTAACGTTGCGTGGTTTGGAGGTGTTGTCTTCTCTGATTACTTCAGCTGTATCTTGGGTTTG
GTGAGGCAAGGTAGCAGTTGGAGTTTGAATCCGTTTGGTGAAATTAGGAACGAAGACCGCACTCTGTTCGAGCGTGGCCGCGGTAACGCTTGCAGCGTCGAGTTCAACTGCTTGTACCGC
TGGCATGCAACTACCTCTGCGGAAGATGAGAAGTGGGTTGAATTGGTATTCAAGAAATTGTTCCCCACGAAAACATACGACCAGGTGTCTCCTATGGACTTCAAAGCCACGGCGAAGGCC
ATGGAGGCTATGGAGCCTGATTGCACCCACTGGACATTTGGAAACCTTCAGCGTCAAGCAGATGGTACGTTCAAAAGCGAAGATTTGGCGAACTTCCTCTTCAACGCGACCGAGCACCCT
GCTGCTGCCTTCAGAGGTCGCGGCACACCCCCAGTTATGCGACTGAATGAGATCATGGGCATTGAGCAAAGCAGGAAGTGGGGATGCTGTTCGTTGAATGATTTCAGAAGTTTCCTTGGC
TTGAAGAGATATGCCAGCTTCCGGGAATGGAACCCCAACCCTGAGATCGCTGACGCTGCGGAGAAGTTGTATGGTCAAATCGACAACTTGGAACTCTATGTCGGCCTCCAAGCCGAAGAA
GCCAAACCACTGATAGACGGTGCTGGACTCTGCCCTGGATATACCATCAGTCGTGCCATCCTAAGCGATGCTATCGCTCTCACTAGAGGCGATCGTTTCTTCACTGCAGACTTTACCCCA
TTCAACCTGACCGCCTGGGGTTTCGCTGATTGTCAGCGTGATACTTCTGGCCCTGGTTTCGGCAGTATGCTTGGTCGTCTCTTCTTGCGAGCCCTCCCGGACAACTGCGAGGCGGAAAGC
ACTTATACTTGGTTCCCCCTGATGACTCCCGATTCTATGAAGGGCTATTTACAGAAGTTGGAGGTTGCAGGCCAGTATTCGTTCTCTCGTCCTACTGGCGAGACCCCTCTTCGTGTTGTT
GAGGATTACAAGGAGATTCAGACCGTGTTGAAGAGTCCTGACGGCTATAAGGTCGCCAGCGCCTCTCTGGCAGACTCGTTGGTTGACGGCGCCGGTTTCTACCTTGCCTCCTCCGATCCT
GTTCGCTCTGCTCGCGAGCAACGTGACGTACTCCGTGCTCTGGGTGATACAGCTCAAGCCACCGACCGCATTGCTCAGTTCTTCTATCAGAAGACCAAGGAGCTGATTACTACTCGGTCC
TACGCCCTTGTTGGAGGCAAGACGAAGTGCATCGATATTGTTGGTGATGTTCTGAAAGCCGTCCCTCTTCAATGGGTTGCATCCGAGATTTCTGGGTTTGAGTTGAAGAAGGCGAAGGAC
GGCCCTGGGCTCTACACTGAAGCTCAGCTGTACGACATTCTGGGGAATATCTATGGTCATCTCTTCCTGGACTCTGATCCATCCAAGGCTATCTCCCAAAAGATCCAAGTGAAATCCCAA
GTCAAGGAGCTCGTGAACCATATCAAGGAGAACCTCCCCGCTAGTGTTAGCGGCCGATTGTCGCTTGTGGGTCTACTGGACCAATTCTCCCAGTTATTCAAGACTTATCCCAAGAGTGCG
CGAGAGCAATTCGCGGAGGGTCTCTCGGAGTTGGGTTTGTCCGCGGACAAGATTGCGAATTCAATTCTGGCCGTGATGGTTGGAGCTACGATCGAACTATCACAAAGCTTGGTCCACGTC
ATCAATGCATATCTCGGTGATGAGAAAACGCCAGTGAGCACGCCATCTGGATTTGGTGCTGCTTCTACAGCATCATCGGCTATCAAGGGGTATGTTTTCGAAGCACTCCGACTTGACCCT
CCTTTCGCTGGGGTTTATCGTGAAGTCGCGGGGCCGTCCGTAAGTGCTGCGAAGACCCAGCGCTTGTTTTTGGATATCGCAAAAGCTGGCAACGAGGCCGGCCTTGCTGCGCAAGGTGAT
GGTCCAGCTAGTTATCTTTTGGGCGATGGTTGTGCACGGTTCTTGGGAGTGGAGCTCACATCCAAGATCTTGACGTCCGTCCTTCGGGCTATCTCCGAGTTCAACAATGTTCGCCGGGCA
CCAGGCATTTCGGGTCAACTCAAACGTTTCCCGGCCAATGCGAACCGCGCCGTGCGTTGGGAGTACCTAAACGACAGTCAACAAGCGTCGCCTTGGCCCACCGCGATGCTCGTGCAGTTT
GACCTCGCATAA

Retrieve as FASTA