View Redoxidase 10661

Entry information : MlpLDS01

Entry ID	10661
Creation	2012-03-02 (Christophe Dunand)
Last sequence changes	2012-03-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-08-20 (Catherine Mathe (Scipio))

Peroxidase information: MlpLDS01

Name

MlpLDS01

Class

Linoleate diol synthase (PGHS like) [Orthogroup: LDS001]

Taxonomy

Eukaryota Fungi Basidiomycota Melampsoraceae Melampsora

Organism

Melampsora laricis-populina [TaxId: 203908 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MlpLDS01 start..stop	S start..stop
MlpLDS03	1305	0	2..1158	5..1083
MlpLDS02	1031	0	7..793	2..825
ScomLDS02	464	5.52e-145	98..923	61..850
PplLDS02	440	6.55e-137	128..879	1..718

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10661' 'join(2136443..2136610,2136676..2137002,2137092..2137377,2137451..2137738,2137816..2137988,2138086..2138212,2138294..2138328,2138390..2138402,2138493..2138590,2138678..2138892,2138989..2139085,2139174..2139318,2139393..2139424,2139497..2139606,2139677..2139714,2139783..2139941,2140001..2140047,2140112..2140302,2140380..2140454,2140519..2140639,2140707..2141183,2141247..2141319,2141400..2141629)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2136443..2136610	166	N° 2	2136676..2137002	325	N° 3	2137092..2137377	284	N° 4	2137451..2137738	286
N° 5	2137816..2137988	171	N° 6	2138086..2138212	125	N° 7	2138294..2138328	33	N° 8	2138390..2138402	11
N° 9	2138493..2138590	96	N° 10	2138678..2138892	213	N° 11	2138989..2139085	95	N° 12	2139174..2139318	143
N° 13	2139393..2139424	30	N° 14	2139497..2139606	108	N° 15	2139677..2139714	36	N° 16	2139783..2139941	157
N° 17	2140001..2140047	45	N° 18	2140112..2140302	189	N° 19	2140380..2140454	73	N° 20	2140519..2140639	119
N° 21	2140707..2141183	475	N° 22	2141247..2141319	71	N° 23	2141400..2141629	228
join(2136443..2136610,2136676..2137002,2137092..2137377,2137451..2137738,2137816 ..2137988,2138086..2138212,2138294..2138328,2138390..2138402,2138493..2138590,21 38678..2138892,2138989..2139085,2139174..2139318,2139393..2139424,2139497..21396 06,2139677..2139714,2139783..2139941,2140001..2140047,2140112..2140302,2140380.. 2140454,2140519..2140639,2140707..2141183,2141247..2141319,2141400..2141629)

Literature and cross-references MlpLDS01

DNA ref.	JGI genome: scaffold_5 (2136443..2141629)
EST ref.	GenBank: GR811534.1 [3' end]
Cluster/Prediction ref.	JGI gene: 76882

Protein sequence: MlpLDS01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	1174 (337)
PWM (Da):	131140.88 (35359.9)
PI (pH):	7.06 (4.76)	Peptide Signal:	cut: 22 range:22-358

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSTPTRPPSRYAAEPKPGEALLQSAGYTHLLLVGQAKDLPTLSASPVWRKASQLQETIGSVSHYLFSRGSSNSGLNNEDEVALTDSKTPTSLIFLSVQQLLSGRIPENLSMIINILSSVG
KPLDDRKMQLEDVVGWLATSGRKNQHAPNKMVNDVQGQFIDILWNDLSHPSTVDLNPKHRFRTPDGRNNNIIGSPFLGAANQPYARSVKALHPRAPYVAEPEEMFDSILRRPEGFEGFVP
HPAGISSLLFGFANIIIHDIFWTNTGPEVKGPGSDTDSNQYGDSGNGSSRASQWQNLTSSYLSLDPLYGVGQEEQDKIRNKEDLGRGLLYNDTFASSRLLVMPPASCALLVIFSRNHNRV
AKRLLEINERKTWTADLEKLSPEQLQQQDDEIFGTARLINCGYYVEMILHDYLSAILNTTQADSDWALDPRAPIKSILGSTPKATGNSVTVEFNSLYRWHAPMSWSQSKWIEKWEDVNHE
TIKKSAALLKKELNAEDGVEPRYWKLSKYEVNVPRSGQPELTSAGVYERDSETGEFRDEDIAKILKDSTYEVAGTFGARHIPAAMRWIECQGMRTSRDVWKTCTLNEFRAFLGLKEFESF
EEWNSDPSVASAMQDLVGHPANIPLHVGLHGEEAKKPRLGAGLCPNYTNSRAILSDAVSLVRGDRFYTDSATADTMTDWGLRDCQPDVQEGAYGGMLQKLIRNNLPDQYVFNDVALLFPF
KTPQSSYSILEKIGPQKALQYSLQPTPTPHLSLGYKHIQSGGKTMVYEISDTPKVEVERMSLLFGLPKMNSNIKLIYQAVEMAMSRQNSEQYKLFIQSRIQQCSARRSPVSTDETVDVAR
DVTNPLICGWLSHIFGLVETGIHSQQLLLCALSDIYCYLNAHDQISFKSRASARVAASGFAWQIKQHIEASSPPNSIGNLIRRGVSKLTIGAIDVLEDSIKTISGQRPDIKHTSPDTKIF
YDTIRVENDAQRIPLSIDELTADCLRAVSTLAYTIVNGTAHALDYLMPATTTHADEIPKLRQTLHDLVHNPRFDRSNIHEAHLKHGLEGVRLAHWNPYLRAISFGVKLEHRAHPRPIGII
DREFRLDRNTLEYLRLLDVEGYCLPMFEIILPVIINQVFSLNKVQRAPGMQGRLEKIMITGTSASIPTMHIRYDGSKTLKAINSLRGRRTNGIA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (22 introns) and 6 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCCACACCCACTAGACCCCCTAGCCGTTATGCTGCCGAACCCAAACCAGGTGAAGCTCTTCTGCAGAGTGCAGGGTACACTCATCTGTTACTTGTTGGTCAAGCAAAAGACTTGCCG
ACGTTGAGCGCTTCGCCTGTCTGGCGCAAAGCCTCTCAATTGCAGGAGAGGTGAGTTCTTCTCATATTTCTCCCCGTTGGTGTATGTTCGTTTTTTGATGTTTCCTCTGTCTTAGACCAT
TGGCTCCGTGTCACATTACCTGTTCTCCAGAGGTAGCTCAAATAGTGGTCTCAACAATGAAGACGAGGTGGCGCTCACCGACAGCAAAACTCCAACTTCGCTCATATTCCTCAGTGTCCA
ACAACTTTTGTCTGGTAGAATTCCTGAAAACCTTTCCATGATAATAAACATTTTGTCTAGTGTAGGTAAACCTCTAGATGATAGAAAGATGCAACTGGAAGATGTTGTGGGTTGGTTAGC
CACGTCTGGTAGAAAAAACCAACATGCACCCAACAAGATGGTGAATGACGTCCAAGGTCAATTCATAGATATACTCTGGAATATGTAAGTCCTTTCAAGTCTCTATAACACAAGTTCCCT
TTGCACGATTGAAATGTTAATCACCTCACTTTCACTGCTTCTTTTGCCTAAAGGACCTCTCGCATCCATCAACTGTTGATCTGAATCCCAAACATCGCTTTAGAACGCCCGATGGTCGGA
ACAACAATATCATTGGTTCCCCATTTCTTGGTGCTGCCAATCAACCCTATGCTAGATCTGTCAAGGCACTTCACCCTCGCGCACCTTACGTCGCGGAGCCGGAAGAGATGTTCGATTCTA
TCCTGCGTCGTCCCGAGGGTTTTGAAGGTTTTGTTCCTCATCCTGCTGGAATATCAAGTCTCTTGTTCGGCTTTGCCAACATCATCATCCATGATATCTCTGTGAGATTGATCTACTTTA
CTTCATCAACCTGATTGTTAGTGACTGATTTCGAAATTCACACTTGAACCATAGTCTGGACTAACACTGGTCCAGAAGTTAAAGGTCCGGGATCCGATACCGATTCGAATCAATACGGTG
ACAGCGGGAATGGATCCTCGCGTGCAAGCCAATGGCAAAATTTGACATCCTCTTATCTTTCCTTGGATCCTTTATACGGAGTCGGACAAGAGGAACAAGACAAGATTCGCAACAAAGAGG
ACCTTGGCCGCGGCTTGTTGTACAATGACACTTTTGCATCCAGTCGATTACTTGTGATGCCTCCAGCATCGTGTGCTCTACTTGTAATCTTTTCTAGAAACCCCGTAAGTGTTTATTTGT
GAATCTATTGAACGAATTACAAAAGCCTTTCGCTGAAAGATATCCACATTCAATCAATCAGATAATCGAGTTGCTAAAAGGCTTCTGGAGATCAATGAACGCAAAACTTGGACAGCCGAT
TTGGAGAAACTCAGTCCCGAGCAATTGCAGCAACAAGACGATGAGATTTTTGGCACCGCCAGATTGATCAATTGCGGCTATTATGTAGAGATGATTCTCCACGACTATCTCAGCGCGTAA
GTTTATCAATCGAGCCGATGAACTGTTCTCCTGCCGGTTTTCAAACATATCGCTTTGAGTTTTTGTTGAACGTACTTTCTTCCCAATCGTCAGGCTATCTTAAACACTACACAAGCCGAC
AGTGACTGGGCGCTCGACCCTAGAGCTCCGATCAAAAGTATCCTCGGGAGTACCCCTAAGGCTACTGGAAACTCAGTCACAGTTGAATTCAATTCTCTATATGTAAGCATCCTCCTTATC
TTGTTTTGTGATCAATCAGTTATGCCCAATAGTCATTTATCTGAGCATTGACTGCCATGATAGATCGCTGGCACGCTCCGATGTCGTGGTCCCAAAGTGTGTGAGTTCGGTTATAGTCAC
TCATGTCTGTACATATCATGACTTACATGTATATGACTTAGAAATGGATCGAGAGAGTATGTTTGAACGGGCTCTTCCTAGTAGAAGTAAGATATCTTTTCCCATTTCTTTCCAATTCGA
TTAAATTTGACTATGACCCCTTTCAGAATGGGAGGACGTGAATCATGAGACCATCAAAAAATCAGCCGCCTTATTGAAGAAGGAGCTTAATGCTGAAGACGGGGTAGAGCCTAGATATTG
GAAGAGGTTAGTTTATCTTTTTGTGTGTCTCTATTGTGTGTAACTCTTCGCAAAGTCACTTATCTCCCACTTATCGACCTTGGAATTGCGCAGTTATCTAAATACGAAGTCAACGTTCCT
AGAAGTGGCCAACCAGAGCTGACCTCCGCAGGAGTTTACGAAAGGGACTCAGAGACCGGTGAATTCCGTGATGAGGACATTGCAAAGATTTTGAAAGATTCTACGTACGAAGTTGCTGGT
ACTTTCGGAGCACGCCATATACCTGCAGCCATGAGATGGATTGAATGTCAAGGAATGCGAACTTCTAGAGGTACGTCAAGGTATTTTGAAGAGTAAAACATGGTCTTTAGACATTATCTC
ATCATCTTTTTGTTTCACTTGTGGTTGTGGGTGACTGGATTAACAGAGATGTGTGGAAAACCTGCACCCTGAATGAATTCAGAGCTTTTCTGGGTTTGAAGGAATTTGAATCATTTGAGG
AATGGAATTCGGATCCTTCTGTGTGGTAAGCTCCTACTCAACCTCATCAATCCCCTAAATCCCACGGTAGCCCCTTCAATCTGACTTCAAACATCTCTTGTTGGTTTCACCAGGCTTCTG
CTATGCAGGATCTTGTCGGCCATCCTGCGAACATTCCATTACATGTTGGTTTGCATGGTGAGGAAGCTAAGAAGCCAAGATTAGGAGCAGGGTTGTGTCCAAATTACACAAACAGTCGGG
CTATCTTGAGTGATGCAGAGGTTGGCCACTTTCACACACTCCGTGACCATGAAAGATTGTCGACCACTTGTTAATTTCTCTTTGACGTCCATAGTTTCCCTTGTTCGGGGAGATCGGTTC
TACACGCGGTGAGTATCTCAAAGCGCCTATCTTCGAACCAGTTTGATCCTAGAGACTCGCTGACAAGTGTCATTTCTTAGGACTCTGCAACTGCCGACACTATGACGGATTGGGGCCTGC
GTGACTGTCAACCGGACGTTCAAGAAGGGGCTTACGGTGGCATGTTGCAAAAATTGATACGCAATAACTTTTGTAAGTATCTTCTGTAGTGTCTGTAGTTGGTGGCAAATCATCTCATCT
TGTTCCACTTTTTCACTCGCAGGCCGGATCAATATGTATTCAACGACGTTGCTCTACTATATGTGCGTCCAATATCACCCCCTGAGGCTGTTTATTGAATTGCTTATCAGCTTCTTTGCT
ACACATACAGTTCCTTTCAAAACCCCTCAAAGTTCCTACTCGATTCTGGAGAAAATAGGCCCTCAAAAGGCCCTGCAATATTCGCTTCAACCTACTCCTACTCCACATTTGTCCCTAGGT
TACAAACACATACAATCGGGCGGAAAAACAATGGTCTATGAGATTTCTGTGGTATGCTTACTTCTTACCGGAATCTTTTTCAGAATTCTGACCAGTTTAATTTGTATCAGACACTCCGAA
AGTCGAAGTAGAAAGAATGAGCTTGCTTTTTGGTTTGTGGTCAGTTTTCTAAATCGGGTTGTCCTTCGAAGTAGCCTCTTCTGATCATTCTGTGATTCTACAGCCAAAGATGAATTCAAA
CATCAAGCTTATTTACCAGGCAGTTGAGATGGCGATGTCCAGACAAAACTCCGAACAGTACAAGTTGTTCATTCAAAGTCGCATCCAACAATGTTCGGCCAGACGAAGCCCAGTGTCTAC
CGATGAGACTGTCGATGTAGCGCGGGACGTGACCAACCCATTGATATGTGGATGTGGTAAGCTTAAACTTTCAACAGAAAGAGAAATGCAAAATGCAAGATCTGACATTCACAATCACGA
ATTTCCATTCAAGGCTTTCTCATATCTTTGGACTTGTGGAAACTGGGATTCACTCGCAGCAGCTTCTCCTCTGCGCATTAAGCGACATATGTAAGTTTTCTATACAACGAGCCGAACAAT
TTCTCGAGTATCATTTGACGATGTTCTCTTTCAGCTATTGCTATCTGAATGCACATGACCAAATCTCCTTCAAATCCAGAGCTTCTGCTCGTGTCGCCGCTTCGGGTTTTGCTTGGCAAA
TCAAACAACATATTGAGGCATCTTCACCTCCCAATATGTAAGAGAAAAATCTTGGTCTCTTCTCCGGTTGAATCAACTCTGATCATGCCTTCGTTCATCTTTAGTCGATCGGAAATTTGA
TCAGAAGAGGAGTTTCTAAGCTCACCATAGGTGCAATCGATGTCCTCGAGGATTCCATCAAGACCATATCTGGTCAAAGACCGGATATCAAGCATACTTCTCCTGACACCAAGATCTTCT
ATGATACCATAAGAGTAGAGAATGATGCTCAAAGAATCCCACTTTCTATTGACGAGCTCACAGCCGATTGCTTGCGAGCCGTCTCAACCTTGGCATACACTATTGTCAACGGTACAGCGC
ATGCGTTAGACTATCTGATGCCCGCTACAACGACCCACGCAGATGAGATTCCTAAACTTCGACAAACGTTACACGACTTGGTCCACAACCCCCGCTTCGACCGATCGAACATACATGAGG
CTCATCTAAAGCATGGGTTGGAAGGTGTGCGATTGGCCCATTGGAATCCTTACCTGCGAGCTATATCGTTTGGCGTAAAACTTGAACACAGGGCCCATCCTCTGTAAGCACGACCTGATT
TTTCTTTATTCACGTAATTAGAAGCATTGACACGACAACTCCTCAGCGTCCGATCGGCATCATCGACCGTGAATTTCGACTCGACCGAAACACTTTGGAATACTTGCGATTATTAGATGT
GGTGCGCTCGCTCTCTTGATGTTTATTTATATAGCGCTGACTCCAAAATCCCCGTCTTTTTCCCACTTTATTGGGCTATAGTCGAGGGCTATTGCCTCCCTATGTTTGAGATTATTCTGC
CCGTCATCATCAATCAAGTTTTCTCTCTTAACAAGGTCCAGCGTGCACCAGGTATGCAGGGTAGGTTGGAGAAGATCATGATCACGGGTACCTCCGCGTCCATACCGACCATGCACATTA
GATACGATGGGTCCAAAACCTTGAAGGCGATAAACAGCCTCCGAGGCAGAAGAACAAATGGTATTGCGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA