RedOxiBase: View Perox 10663

Entry information : MlpLDS03

Entry ID	10663
Creation	2012-03-02 (Christophe Dunand)
Last sequence changes	2012-03-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-08-20 (Catherine Mathe (Scipio))

Peroxidase information: MlpLDS03

Name

MlpLDS03

Class

Linoleate diol synthase (PGHS like) [Orthogroup: LDS001]

Taxonomy

Eukaryota Fungi Basidiomycota Melampsoraceae Melampsora

Organism

Melampsora laricis-populina [TaxId: 203908 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MlpLDS03 start..stop	S start..stop
MlpLDS01	1320	0	5..1083	2..1158
MlpLDS02	937	0	10..745	2..825
ScomLDS02	385	1e-116	110..668	70..619
GluxLDS02	377	8e-114	77..683	36..625

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	471111..471290	180	N° 2	470715..471041	327	N° 3	470355..470640	286	N° 4	469970..470260	291
N° 5	469723..469895	173	N° 6	469261..469303	43	N° 7	469091..469194	104	N° 8	468802..469016	215
N° 9	468628..468724	97	N° 10	468408..468552	145	N° 11	468299..468330	32	N° 12	468122..468231	110
N° 13	467693..467903	211	N° 14	467428..467618	191	N° 15	467112..467232	121	N° 16	466557..467027	471
N° 17	466420..466492	73	N° 18	466147..466328	182
complement(join(466147..466328,466420..466492,466557..467027,467112..467232,4674 28..467618,467693..467903,468122..468231,468299..468330,468408..468552,468628..4 68724,468802..469016,469091..469194,469261..469303,469723..469895,469970..470260 ,470355..470640,470715..471041,471111..471290))

Literature and cross-references MlpLDS03

DNA ref.	JGI genome: scaffold_20 (471290..466147)
EST ref.	GenBank: GR767567.1 [5' end] GR767568.1 [3' end]

Protein sequence: MlpLDS03

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	1083
PWM (Da):	120595.1
PI (pH):	6.84

Sequence 1125
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSQQTTANRPYHSQQSSQPKAGEALVQTRGYTHLLQIGSATDLPTSSDSGLWRRVAQFQETAGIVSHYLFSKGGQYGHLDNYEESATTDNKKSTSLAYLAVQQTLAGLVPENLAMVANLLTSVGKPLDDRKLQLEEVVAFLSRAGKRRHNAPNKYVDAAQNQFITLLWNDLSHPPTVDLNPKHRFRKADGSDNNLTGDPLLGAANQPYSRSVRPVHPVPTHIAEPEDMFDAILRRPTGYEGFTPHPARISSLFFGFANIVIHDIFWTNNREEVKVPNKYHESDQNTEQADDKPKKPSPWQNLTSSYASLDPLYGVSDKEQASIRDKEQLGRGLLYNDTFASDRLLMMPPASCALLVLFSRNHNRIAKKLLELNERGSWKSDLSKLSEEELKQQDDEIFGTARHVNCGYYAGIILGDYLQQWLESTFEKALPSRKWDEMNMSTLMDAIKILKTKLNAADENAHNPKVWKLSKREVRIPVEGPPVVESEGVYERDSQSSKFRDEDLARILKDSTYEVAGAFGARHVPAVMRWIECQGMRTARDVWKLCTLNEFRAFIGLKEFQTFQEWNSDPEIASAMEDLVGHPANIPLHVGLHGEEAKKPRLGSGVCLPYTISRAILSDAIALVRGDRFYTDNATADVMTNWGLADCQPDPQNGAPGGMLEKLIRENLHQKALNYAIDPPVQPIIGYKQIQSGERTLVYELSGMHGIQVISRLIADTILSSKDTPRVEAQRMGMIVGLDHMNSNIKLVYKAVEKVMYHQDVKQYHDFIHSRIQECSTRRSPVSSDETVDVLRDVTNPLVSGCYCYLTESPQRSFKARAAARIAASGLTWQIKSHIQGCAPSHSVGDTFKKGASMAMMGALGALEETVKFVSGQDPGFKGGHGDTLAFYKTLTAENNAQVDPLSPDELAADCLRAISTLAFTIVNGTANALDYLLPEVTKPDEVPRIRETLETIIKGNNEPGLHEAFSRHALEATRLGHWNESLRGMVFKSEYQNRNSRSLPIGIIDSDFRLDRDTSSYLRLLDVEGYCLSVFENIVPIVISQVLSLPQVRRAPGGQGKLEKLKIAGSNSGIPTMHIRYDGTKS*

Retrieve as FASTA

Remarks

Complete sequence from genomic (17 introns) and 3 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCACAACAAACCACTGCCAACAGACCTTATCACTCTCAACAGTCTTCCCAGCCTAAAGCTGGTGAAGCTTTAGTTCAGACTAGAGGATATACTCATCTATTACAGATTGGTTCAGCT
ACTGATTTACCTACTTCAAGCGATTCTGGATTATGGCGTAGAGTTGCTCAATTCCAAGAGGTACGTTCTTGTGATCAATTGAGTTTTAGTTTTCTAGAGGATGATTCTGACATCCTTTGA
ATTTTTCAGACCGCTGGAATTGTCTCGCATTACCTGTTCTCCAAGGGTGGTCAATACGGTCATTTGGATAACTATGAAGAATCAGCTACCACTGATAATAAAAAATCAACTTCATTGGCT
TACCTCGCTGTTCAACAAACCTTGGCGGGTTTGGTACCAGAGAACCTTGCTATGGTCGCGAACTTATTGACTAGCGTTGGAAAACCATTGGATGACCGAAAACTTCAACTTGAAGAAGTC
GTCGCTTTTCTCTCTCGTGCTGGAAAGAGAAGACATAACGCTCCTAATAAATATGTTGATGCGGCTCAGAATCAATTTATCACTTTGCTTTGGAATGTGAGTGTTTCTGAACTTTGTCCT
TTTTTAAATGTATTGAAACCCAATATTTGCCTCGCATGAAAAATAAACAGGATCTCTCTCATCCTCCAACAGTGGATTTGAATCCCAAGCATCGCTTCAGGAAAGCTGATGGAAGTGACA
ACAACCTGACTGGTGATCCGCTCCTTGGAGCTGCCAATCAACCGTATTCCAGATCTGTTCGACCGGTTCATCCTGTTCCGACTCACATAGCTGAGCCCGAAGACATGTTCGATGCTATTC
TACGTCGTCCTACGGGGTACGAAGGTTTTACCCCTCACCCAGCTCGCATTTCCAGTTTATTCTTTGGTTTTGCGAATATCGTCATTCACGACATATGTCAGTTCATTTCTTTTGTGATTG
ATCTTGGTCTACGAGGAATTTTGGAAATATAAGCTGACATATGATTGTTCATGGTTGCCATTGCCATCAGTCTGGACCAACAATCGCGAAGAAGTCAAAGTCCCGAACAAATATCACGAA
TCGGATCAGAACACAGAACAAGCCGACGACAAACCCAAGAAGCCCAGCCCGTGGCAGAATTTGACGTCATCTTATGCTTCTTTGGATCCTTTATATGGCGTCAGCGATAAGGAACAAGCA
AGTATACGCGACAAAGAACAGCTTGGTCGTGGCTTGTTGTATAACGATACCTTTGCCTCGGATCGATTGCTCATGATGCCGCCAGCTTCATGTGCTTTGCTTGTTCTCTTCTCCAGGAAT
CGTAAGTGAGGATTAAAGACGGGACTTGAACTCTTCACCCGAAACTCACTCTTGATCTGTCTTTTTCCAAAATAGACAACCGCATCGCCAAGAAGTTACTAGAACTCAATGAACGCGGTA
GTTGGAAATCAGACCTGAGCAAACTGAGCGAAGAAGAATTGAAACAACAAGACGATGAGATCTTTGGTACGGCACGACACGTTAATTGCGGTTATTACGCTGGCATCATCCTTGGAGATT
ATCTACAGGTGGGCCCTTTGCTTGTAAATTTCCATAGATTTACGCGTAAAGAAACTCATCGGCCCCTTGATCATCACTCGCTTCGCACTCCCCAAGGCCATTTTGAACACCACGCAAGCT
GATAGCGATTGGAGTCTCAACCCTAGACTTCCGATCAAAAGCATTTTAGGTACCACTCCGAAGGCTACTGGAAATTCGACTAGCGTCGAGTTCAATACCCTTTGTGGGTTTAATCCGTTC
CACACACAGCCTATAATTTGTGAATGAAAGAACTGAATAGCGCCTCGAGTTTTTTGTTCCCAGATCGATGGCACGCCCCGATCTCGTGGTCTCAGACCGTAAGTTGAATCAAGATGCTTA
TTTATATGATAGAAGACTGTTCTTAGTATAAGCTCATCATTCTTTCTGCCTCATTATATTTGTTTAGCAATGGCTTGAGTCAACTTTTGAAAAAGCTCTACCAAGTCGGAGTGAGTGCGA
GAGCCTTTGTCCTGAGAAATATTCACGACCTATTGATAACAGAGGGTTTTAACTAGAATGGGACGAGATGAATATGTCGACTTTGATGGATGCGATTAAAATCTTGAAAACCAAGTTGAA
TGCTGCCGATGAAAATGCTCATAATCCCAAAGTTTGGAAGGTTAGTGCTGACAATTTTGAGATTTGAGATTTGCTTCCGCATCTAGCTTGCTGATAGATATTTGATTTTATCAGTTATCG
AAACGAGAAGTCAGAATACCTGTGGAGGGTCCACCCGTGGTGGAGTCCGAAGGTGTTTATGAGAGGGACTCGCAAAGTAGTAAATTCCGCGATGAGGATTTGGCGAGGATCTTGAAGGAT
TCTACATATGAAGTTGCAGGTGCCTTCGGAGCCAGACATGTACCAGCAGTAATGCGCTGGATTGAATGCCAAGGGATGCGGACGGCGAGGTGTGCATCAAAGGAATAGGTCTACCAAGTG
GATCTCTCTTAAGATTTGACATGCTTGCGCTTTTTGATTTCTGCAGAGATGTTTGGAAATTATGTACGCTAAACGAATTCAGGGCGTTTATTGGCTTGAAGGAATTCCAGACATTCCAAG
AGTGGAATTCGGACCCAGAAATTGTCAGTAAGACCTTCTTGCATCCAAGCCCACGAAACTAGACCAACTGATCACAAGACATAAATTTGAATCCACAGGCTTCTGCAATGGAGGATCTTG
TCGGACACCCAGCCAACATTCCGCTTCATGTTGGTCTGCACGGAGAGGAAGCCAAAAAACCAAGATTGGGATCGGGTGTTTGTCTTCCTTATACCATCAGTCGAGCTATACTAAGTGACG
CAAGTTAGTATCGTTCTTGTGTAACCTTTGCTTTTAAAAAAACACTCATCTTTACCGTATCCTGCTTTTGCTATTCATAGTTGCATTGGTTCGAGGAGATCGCTTCTATACGGTATTTAG
GAACTTGACTCTATCACCCTATCTGACCTCCACGATCCTGAGATATGTTTTTTTCTTAGGATAATGCAACTGCAGATGTTATGACCAATTGGGGACTCGCTGACTGCCAGCCTGATCCTC
AAAACGGCGCACCTGGAGGAATGCTCGAAAAACTGATACGCGAGAATCTGTGAGCTTTTTGAGCCGCAGTCCTGTCTTGCATTATGGCCAACTGATTTCCTCCATTGAGACTCTCAGACC
CAACCAATACGCGTTTAATGATGTTGCACTACTATGTAAGTAAAACTTCAAATATTTTACAAGATGTCGCTTCCTCTGATATGATCGCTTGTTATCAGTTCCCTTCATACTACCTCAGCA
CTCATATTCCGTCATGCAGAAGATTAGCCACCAAAAGGCACTCAACTATGCGATCGATCCTCCCGTACAACCTATCATTGGTTATAAACAGATCCAGAGCGGTGAAAGAACGCTGGTTTA
TGAGCTTTCAGGTATGCATGGCATCCAAGTCATCTCGAGGTTGATTGCTGATACTATCCTATCATCTAAAGATACTCCCAGGGTAGAAGCTCAGAGGATGGGCATGATCGTCGGTTTGGT
AAGTTGGTATTGAGTACTCGATTGTGTTTTTCGCGTGTGATGCTTAGACCACCCGTAATTTATCTTTCTCAGGACCACATGAATTCCAACATCAAGCTCGTCTATAAGGCAGTGGAGAAA
GTGATGTATCATCAAGATGTAAAACAATACCATGATTTCATTCACAGCCGCATTCAAGAATGCTCCACGAGGCGAAGCCCAGTTTCATCTGATGAGACAGTTGATGTTCTTCGGGATGTC
ACAAACCCTTTGGTTTCGGGATGGTGAGTGATCTCACTCAGATACACTTCAACAATTTGCGCTGATGTATCCTCTTAAGGCTCGCTCATGTGTTCGGCCTTGTCGAGACTGGCATTCACT
CGCAACAGCTTCTTCTATCTACCTTGAGTGATGTGTAAGTTCGAACCAAAGCATAAAACCCTCCAGCCTACATCCTGAAGTAAATTCTGTACCCCTAGTTATTGCTATCTAACCGAGTCA
CCTCAGCGATCTTTCAAAGCTCGTGCAGCTGCGCGAATAGCTGCCTCTGGGTTGACCTGGCAGATCAAATCTCACATTCAAGGATGCGCCCCTTCTCACGTAAGAGAAAACCCCGAACTG
ATCTCTACAAGCCTTATACTTTTCCAAGACTTACCCCCTCTGCTTTCGAATTTCGGGATACAGTCAGTTGGAGATACGTTCAAGAAGGGCGCATCTATGGCAATGATGGGGGCTTTGGGA
GCGCTTGAAGAGACTGTCAAATTCGTGTCTGGTCAAGATCCTGGATTTAAAGGCGGACATGGCGATACCTTGGCATTTTATAAGACCTTGACGGCTGAGAACAATGCTCAGGTTGACCCA
TTGTCGCCCGATGAACTAGCAGCTGACTGTTTGAGAGCAATTTCCACCTTGGCCTTTACCATCGTAAATGGTACGGCAAATGCGCTGGACTATCTTTTGCCCGAAGTTACCAAGCCGGAT
GAAGTTCCCAGAATTCGAGAAACTTTGGAAACGATCATCAAGGGAAACAACGAACCTGGACTACATGAGGCATTTTCTAGGCATGCATTGGAAGCCACACGTCTTGGTCACTGGAATGAA
TCTTTGCGTGGTATGGTATTCAAATCCGAATATCAAAATAGGAATTCTCGCTCTGTGAGGATCACTCGACTTATCTTTCTTTGAAACAAGAGACTGAATAACGTGATACTCCTTTTAGCT
ACCTATTGGAATCATTGACAGCGATTTTCGACTTGATCGAGATACCTCTTCCTACTTGCGCTTGTTAGATGGTAAGCTCGTCTATGTATGGTGCCAATCTAATCAAACGATCAAATTCTG
ATTCGAGACCGTTTCCTATCTGTCTTTCTCATTTGATTACAGTTGAGGGATATTGTCTCTCGGTCTTTGAAAACATTGTGCCTATCGTAATCAGCCAGGTTTTATCACTTCCTCAAGTCA
GACGGGCGCCCGGTGGTCAAGGGAAGTTGGAAAAACTCAAGATTGCGGGTTCGAATTCAGGTATCCCTACGATGCATATTAGATATGATGGTACCAAATCATGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA