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Entry information : AdelAPx-CcP
Entry ID 10672
Creation 2012-03-05 (Christophe Dunand)
Last sequence changes 2012-03-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: AdelAPx-CcP
Name AdelAPx-CcP
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Auriculariaceae Auricularia
Organism Auricularia delicata    [TaxId: 160860 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AdelAPx-CcP
start..stop		 S start..stop
ParcAPx-CcP02 443 1.63e-151 11..485 13..506
ScomAPx-CcP01 442 3.01e-151 12..514 11..524
ParcAPx-CcP01 420 2.04e-142 6..503 7..521
DsAPx-CcP 414 3.32e-140 5..460 7..468
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10672' 'complement(join(110946..111173,111235..111585,111639..111822,111872..111985,112043..112137,112184..112200,112258..112427,112484..112529,112590..112656,112708..112800,112867..113070))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 112867..113070 202 N° 2 112708..112800 91 N° 3 112590..112656 65 N° 4 112484..112529 44
N° 5 112258..112427 168 N° 6 112184..112200 15 N° 7 112043..112137 93 N° 8 111872..111985 112
N° 9 111639..111822 182 N° 10 111235..111585 349 N° 11 110946..111173 226  
complement(join(110946..111173,111235..111585,111639..111822,111872..111985,1120 43..112137,112184..112200,112258..112427,112484..112529,112590..112656,112708..1 12800,112867..113070))


exon

Literature and cross-references AdelAPx-CcP
DNA ref. JGI genome:   scaffold_105 (113070..110946)
Protein sequence: AdelAPx-CcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   522 (500)
PWM (Da):   %s   56984.07 (54459.7)  
PI (pH):   %s   4.66 (4.57) Peptide Signal:   %s   cut: 23 range:23-522
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTFFKLQALSLISSAAARYAWPDPKYEAIEQLRWDQRGYGSTALFTPCDTFIGGTQTGRSNSADWVRAAYHDAATYNAEDGTGGLDASIRFEEEQQRAENVGTGFANTFFFVNLIANRYV
TYADGLAAAATIMIENCGGPVIDYRGGRVDATEPNKPGVPEPQQSLEEHVASFKKQGFNKTEMIGLVACGHSFGGVQHSSFPDLVPELNDPANTESNARFDTTFRVFDNAVATEYIKGTT
QNPLVVGSNDTLNSDKRIFGSDGNATMAALAADPEHFARTCATLIAKMLDTVPRGVRLTDVITPIPVKPYDVQISYNANGTLNFIGGNVRLWNVAENPNRVVRGVVTDKNGVALKPVVLS
HSSFQIGTAAGERFTSTWYTWPTLPAMDAAASIAKFHYEIDEGDGTPVRVADQDGLGFPMRDDVLFSETSCNYDSTGFPRPWRFDVAVRKGLNASRIFLQTYSLPTLTLEPMLREVGSGS
YDLWSADVLPENDGIWTVSYQIEGMTIDVPGKHRIMLIDCPA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCTTCTTCAAGCTCCAAGCGTTGTCACTCATTTCGTCTGCCGCGGCGAGGTACGCCTGGCCGGACCCGAAGTACGAGGCGATCGAGCAGCTGCGCTGGGACCAGCGCGGGTATGGC
TCGACGGCGCTCTTCACGCCGTGCGACACGTTCATCGGCGGCACGCAGACTGGCAGGAGCAACTCGGCGGACTGGGTCCGCGCGGTGCGTGCGGACTGATGCCCGGTTCTAGTTCGTCGA
CTGACTCGCACCATACTGGCGCACTGGCAGGCGCGTACCACGACGCCGCGACCTATAATGCGGAAGACGGAACGGGCGGCTTGGACGCGAGCATCCGCTTCGAAGAGGAGCAGCAGCGCG
CGGAGGTCTGCATCAGTCTTTCGCCGACTTCGCCGAGTCCTGACGTGTGCGAGCAGAAAATGTGGGCACGGGCTTTGCTAACACGTTCTTCTTCGTGAACCTCATCGCAAACCGCTACGT
AACATGTGCGCGCTCACTTTCTCCGTCGCGAGGTCGGAATTCACATTGACTGTAACCTGTTCCAGATATGCGGATGGGCTGGCGGCTGCTGCGACAATCATGATAGAGAACTGGTCAGTG
CGGCCGCGCCCGGCGACCTACAGCGATTGAATAGCTATTCCTTTCATAGCGCGGCGGGCCCGTCATTGACTACCGCGGGGGGCGGGTCGACGCCACAGAGCCCAATAAGCCCGGCGTCCC
GGAGCCACAGCAGTCGCTCGAAGAACACGTCGCGAGCTTCAAGAAGCAAGGGTTCAACAAGACTGAGATGATTGGTCTCGTTGCATGCGGCCATTCGTTTGGTGCGCCCAACCCTGCAGA
GCCTTTCAAGTTTCAGTGTCTAATTGCCGGTGTACCAGGAGAGGCGTCCAGCACTCCGTCAGTGCCTTATCCGCCGTTGGGACAGCCTCTCACCCAGTAGCAGTCTCGTTCCCCGACCTC
GTGCCGGAGCTCAACGATCCCGCAAACACCGAATCGAACGCTCGATTCGACACGACGTTCCGAGTGTTCGACAACGCAGTGTAAGCACGGGTTCCCCAGGCCGGTTTCATAGGCTTTGCG
ATACTGAGCCCTCGAAGCGCGCAACCGAATATATCAAAGGCACGACGCAGAATCCCCTCGTCGTAGGGTCAAACGACACGCTCAACTCGGACAAGCGCATCTTCGGGAGCGACGGCAACG
CGACGATGGCCGCGTACGCTCGTGCCCCCTTCCTGTAGTACGACGCTAAGCACGGCTGGCAGCCCCTCGCAGCCGACCCAGAGCACTTCGCGCGCACCTGCGCGACGCTGATCGCGAAGA
TGCTGGACACGGTGCCGCGCGGCGTGAGGCTCACCGACGTGATCACGCCCATCCCCGTCAAACCGTACGACGTGCAGATCAGCTACAACGCCAACGGGACGCTCAACTTCATTGGGGGCA
ACGTTCGCGTACGTCGAGTCCGTTGATCGGATTTCGCCTTGGGAAACTAATGCGGCTGCAGCTCTGTGGAATGTCGCTGAGAATCCGAACCGTGTCGTGCGCGGTGTCGTGACGGACAAG
AACGGCGTCGCCTTGAAGCCAGTCGTCCTCAGCCACAGTAGTTTCCAGATTGGCACCGCCGCCGGCGAGCGGTTCACCTCAACGTGGTACACATGGCCGACGCTGCCTGCAATGGACGCC
GCGGCGTCTATAGCGAAATTCCACTATGAAATTGACGAGGGCGACGGCACTCCGGTGCGCGTGGCAGACCAGGATGGGCTGGGATTCCCGATGCGGGACGACGTGCTCTTCTCCGAGACG
TCGTGCAACTACGACTCCACCGGCTTCCCACGCCCGTGGCGGTTCGACGTCGCCGTCAGTCTCTCCACTCCTCACCACATCACTCTGTTTGCTGAACTCGAACGGATGATCGTAGGTGTC
CGCAAGGGTCTCAACGCGTCGCGCATCTTCCTGCAGACGTATTCGCTGCCCACGCTCACGCTCGAGCCGATGCTGCGCGAGGTCGGAAGCGGGTCGTATGATCTGTGGTCTGCCGATGTC
CTCCCGGAGAACGATGGGATATGGACTGTGTCTTATCAGATTGAAGGTATGACTATCGACGTCCCGGGGAAGCATCGTATCATGTTAATCGATTGCCCTGCCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCTTCTTCAAGCTCCAAGCGTTGTCACTCATTTCGTCTGCCGCGGCGAGGTACGCCTGGCCGGACCCGAAGTACGAGGCGATCGAGCAGCTGCGCTGGGACCAGCGCGGGTATGGC
TCGACGGCGCTCTTCACGCCGTGCGACACGTTCATCGGCGGCACGCAGACTGGCAGGAGCAACTCGGCGGACTGGGTCCGCGCGGCGTACCACGACGCCGCGACCTATAATGCGGAAGAC
GGAACGGGCGGCTTGGACGCGAGCATCCGCTTCGAAGAGGAGCAGCAGCGCGCGGAGAATGTGGGCACGGGCTTTGCTAACACGTTCTTCTTCGTGAACCTCATCGCAAACCGCTACGTA
ACATATGCGGATGGGCTGGCGGCTGCTGCGACAATCATGATAGAGAACTGCGGCGGGCCCGTCATTGACTACCGCGGGGGGCGGGTCGACGCCACAGAGCCCAATAAGCCCGGCGTCCCG
GAGCCACAGCAGTCGCTCGAAGAACACGTCGCGAGCTTCAAGAAGCAAGGGTTCAACAAGACTGAGATGATTGGTCTCGTTGCATGCGGCCATTCGTTTGGAGGCGTCCAGCACTCCTCG
TTCCCCGACCTCGTGCCGGAGCTCAACGATCCCGCAAACACCGAATCGAACGCTCGATTCGACACGACGTTCCGAGTGTTCGACAACGCAGTCGCAACCGAATATATCAAAGGCACGACG
CAGAATCCCCTCGTCGTAGGGTCAAACGACACGCTCAACTCGGACAAGCGCATCTTCGGGAGCGACGGCAACGCGACGATGGCCGCCCTCGCAGCCGACCCAGAGCACTTCGCGCGCACC
TGCGCGACGCTGATCGCGAAGATGCTGGACACGGTGCCGCGCGGCGTGAGGCTCACCGACGTGATCACGCCCATCCCCGTCAAACCGTACGACGTGCAGATCAGCTACAACGCCAACGGG
ACGCTCAACTTCATTGGGGGCAACGTTCGCCTGTGGAATGTCGCTGAGAATCCGAACCGTGTCGTGCGCGGTGTCGTGACGGACAAGAACGGCGTCGCCTTGAAGCCAGTCGTCCTCAGC
CACAGTAGTTTCCAGATTGGCACCGCCGCCGGCGAGCGGTTCACCTCAACGTGGTACACATGGCCGACGCTGCCTGCAATGGACGCCGCGGCGTCTATAGCGAAATTCCACTATGAAATT
GACGAGGGCGACGGCACTCCGGTGCGCGTGGCAGACCAGGATGGGCTGGGATTCCCGATGCGGGACGACGTGCTCTTCTCCGAGACGTCGTGCAACTACGACTCCACCGGCTTCCCACGC
CCGTGGCGGTTCGACGTCGCCGTCCGCAAGGGTCTCAACGCGTCGCGCATCTTCCTGCAGACGTATTCGCTGCCCACGCTCACGCTCGAGCCGATGCTGCGCGAGGTCGGAAGCGGGTCG
TATGATCTGTGGTCTGCCGATGTCCTCCCGGAGAACGATGGGATATGGACTGTGTCTTATCAGATTGAAGGTATGACTATCGACGTCCCGGGGAAGCATCGTATCATGTTAATCGATTGC
CCTGCCTGA

Retrieve as FASTA