View Redoxidase 10684

Entry information : TmesCcP02

Entry ID	10684
Creation	2012-03-05 (Christophe Dunand)
Last sequence changes	2012-03-05 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-08-20 (Catherine Mathe (Scipio))

Peroxidase information: TmesCcP02

Name

TmesCcP02

Class

Cytochrome C peroxidase [Orthogroup: CcP002]

Taxonomy

Eukaryota Fungi Basidiomycota Tremellomycetes Tremellaceae Tremella

Organism

Tremella mesenterica [TaxId: 5217 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	TmesCcP02 start..stop	S start..stop
DcryCcP02	540	0	3..318	1..316
DcryCcP01	532	0	3..318	1..313
CnCcP02_R265	504	0	3..308	1..308
CnCcP02_grubiiH99	503	0	3..317	1..334

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10684' 'join(818647..818683,818814..818889,819173..819212,819254..819273,819316..819340,819423..819519,819585..819775,820044..820111,820156..820251,820430..820478,820549..820654,820795..820943)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	818647..818683	35	N° 2	818814..818889	74	N° 3	819173..819212	38	N° 4	819254..819273	18
N° 5	819316..819340	23	N° 6	819423..819519	95	N° 7	819585..819775	189	N° 8	820044..820111	66
N° 9	820156..820251	94	N° 10	820430..820478	47	N° 11	820549..820654	104	N° 12	820795..820943	147
join(818647..818683,818814..818889,819173..819212,819254..819273,819316..819340, 819423..819519,819585..819775,820044..820111,820156..820251,820430..820478,82054 9..820654,820795..820943)

Literature and cross-references TmesCcP02

DNA ref.	JGI genome: scaffold_11 (818647..820943)
Cluster/Prediction ref.	JGI gene: 33689

Protein sequence: TmesCcP02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	317 (307)
PWM (Da):	34670.4 (33673.9)
PI (pH):	6.73 (8.56)	Peptide Signal:	cut: 21 range:21-327

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSIQSIKEGDYEGIRGEIRKVLKQPQYDDGSAGPVFVRLAWHASGNFSLVEHNGGSNGAGMRFAPESTDPANAGLTHAIDFLMPIQAANPWISHSDLWTLAGITAVEAAGGPRVPWQPGR
TDYTSAAAAEEHRGQVGDRLPDGAKGADHIREVFSRMGFTDQEIVALSGAHALGRCHPDRSGFDGPWVVNPTRFSNQYYKLLLTRKWVPRQWDGPFQYETTVAGTKLMMLPTDMALIEDE
KFRPWVEKYAKDQDLFFKDFALAFGKLLELGVDRDDTGFAKLVKKAAEEGKPLDKVKMAGGGCPFAGTGPKGRDAKL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (11 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTATACAATCCATCAAAGAAGGTGACTACGAAGAGGTCAGTCATAACTATCTACCTCTCCGCAATCCCCATGGCCCTATAACTCCCTCTTGGGTCCAACGCACTAGGTCTGTACAT
TGACAACCTTGAGATCGGAACTTCGACCGGGGATGATATTGATATTCAGGTATCAGAGGTGAAATACGTAAAGTACTTAAACAACCTCAGTATGATGATGGTTCTGCAGGACCTGTCTTT
GTGAGAGGTATGTCACATTCTTCATTTTACACTTCTTCGATTCATATCTCCGATCTCATGTATACCTAGCGAATATCACTCATTTTTGAGCTAGCCTTATGCACGTCGTGGTGGTAGATC
ACACAACTTATCTCTACTTTGTCCATGTCTATATCATACAGGTTGGAGTATTTCAGCAGTACTTTGTGCCCCTATACTGCACGGTGATGACGGATTGGAACACTTACCACGACCACTTTG
TATTCACTTACTAGACCATAGTATCATAATGAAACAACTCTGACGCTCAGACTTGCTTGGCACGCATCTGGAAATTTCAGCTTAGTGGAGAGGTAAGTACCCTTTCTGGACCGAGGTGAG
GCTGATGGGTAAGCATAATGGTGGATCTAACGGGGGTTGGTTTCACACTTGATTGAGGAAATGAGCTGATTTGTAAGAGCGGGAATGAGATTTGCTCCTGAAAAGTAGGTTAATCTCATT
ATTCTTCTCACTTATACTCGATTGATTTTCAAGATGAAGCAATTAGAAACATGCTGATGGATCAAGTCGACTGATCCTGCCAATGCTGGATTAACTCATGCTATCGATTTCTTGATGCCT
ATACAAGCTGCCAACCCATGGATATCACATTCGGATTTATGGAGAGTGAGTCTGTTATCCCCCCCCCTTTTCCACACTATTTCTCCTCTGGAGTCCGTCCCTGATCCCAGCACTGGCAGG
TATCACAGCCGTCGAAGCTGCCGGTGGACCTCGAGTACCCTGGCAACCAGGTCGGACGGATTACACTTCTGCCGCTGCTGCCGAGGAGCATCGAGGGCAAGTGGGGGATCGGTTGCCGGA
CGGGGCGAAGGGAGCGGATCATATTAGAGAAGTGTTTAGTAGAATGGGATTCACAGATCAGAGGTGGGTGAATTTAACGTTTGTTGTCAAATTTACTCGTACTTCTCCTACGGCATTCAT
GTCCCGGATAGGACAGTGCGTTGCCTATTGACGAGATGCTGCTGAGCGTTGTCATGAGGAGCATCTCGATTTCCTGTCTCAAGCCGTCAAAGCAAAGGACGAGTATGTGTCTTTTTGTTT
ATCATAGTGAAGGGGACTCCAAGATGTACATGGAGGAGGACGATGACGCGCTTTAGCGAGGAGCACTGTATAGGAGATGACTGATATGTAGGAAATCGTCGCTTTATCAGGCGCTCACGC
CTTGGGGAGATGTCATCCCGATAGATCGGGGTTTGATGGGGGTCAGTCGTCGCATCACGATATATCAAGGCAAGCTGAGAAATAGTCCATGGGTCGTCAACCCCACTCGGTTCTCGAATC
AATATTACAAGCTCTTGTTAACTCGGAAATGGGTACCGAGACAGTGGGACGGGCCATTCCACAGTGAGTCACCCATGTTCTTTTCTCTCTTTCCTCTCTTTGACTTCTCCTTGTACCCTC
GTGGTCTTCGCTAGACACCCTGCTCTACCATCTTGCGATTGAGCCCGCAAGATTATCATCTCACCTTCACTTGTCATCTGTCCTCAATGCTCCTGGGTTTGTGAATTGACATTGATGATA
GATACGAAACTACCGTGGCGGGTACCAAACTGATGATGCTTCCTACCGATATGTGAGTTATTCAATTCTGATCTTCATCAACTCTTGGCCTAATTCTGAGAGGTCGATCGAACTGAGATT
AGATGGCTTTGATAGAAGATGAAAAGTTTCGTCCATGGGTTGAGAAATACGCAAAGGATCAAGATTTGTTTTTCAAAGATTTCGCTTTGGCATTTGGAAAGTTGCTCGCGGTGAGTTGAT
CCATGAGATCTTCTTAACCAGCCTTTACTCTAAACATTCACCACTCCATTTTGACCTGAGACTTTATTTCCCTTACCAATGTTTCAATGATGTGATTGTGGAAGAAGGGAAAGAGCTATG
CTGATGATAGAACTCGGTGTTGATCGAGATGATACTGGTTTCGCTAAACTTGTAAAGAAAGCTGCAGAAGAGGGGAAACCTTTGGATAAGGTGAAAATGGCCGGTGGGGGTTGTCCCTTC
GCTGGGACTGGTCCAAAAGGGAGAGATGCGAAGTTGTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTATACAATCCATCAAAGAAGGTGACTACGAAGGTATCAGAGGTGAAATACGTAAAGTACTTAAACAACCTCAGTATGATGATGGTTCTGCAGGACCTGTCTTTGTGAGACTTGCT
TGGCACGCATCTGGAAATTTCAGCTTAGTGGAGCATAATGGTGGATCTAACGGAGCGGGAATGAGATTTGCTCCTGAATCGACTGATCCTGCCAATGCTGGATTAACTCATGCTATCGAT
TTCTTGATGCCTATACAAGCTGCCAACCCATGGATATCACATTCGGATTTATGGACACTGGCAGGTATCACAGCCGTCGAAGCTGCCGGTGGACCTCGAGTACCCTGGCAACCAGGTCGG
ACGGATTACACTTCTGCCGCTGCTGCCGAGGAGCATCGAGGGCAAGTGGGGGATCGGTTGCCGGACGGGGCGAAGGGAGCGGATCATATTAGAGAAGTGTTTAGTAGAATGGGATTCACA
GATCAGGAAATCGTCGCTTTATCAGGCGCTCACGCCTTGGGGAGATGTCATCCCGATAGATCGGGGTTTGATGGTCCATGGGTCGTCAACCCCACTCGGTTCTCGAATCAATATTACAAG
CTCTTGTTAACTCGGAAATGGGTACCGAGACAGTGGGACGGGCCATTCCAATACGAAACTACCGTGGCGGGTACCAAACTGATGATGCTTCCTACCGATATGGCTTTGATAGAAGATGAA
AAGTTTCGTCCATGGGTTGAGAAATACGCAAAGGATCAAGATTTGTTTTTCAAAGATTTCGCTTTGGCATTTGGAAAGTTGCTCGAACTCGGTGTTGATCGAGATGATACTGGTTTCGCT
AAACTTGTAAAGAAAGCTGCAGAAGAGGGGAAACCTTTGGATAAGGTGAAAATGGCCGGTGGGGGTTGTCCCTTCGCTGGGACTGGTCCAAAAGGGAGAGATGCGAAGTTGTAG

Retrieve as FASTA