The peroxidases and oxidases database
Entry information : PcriCcP
Entry ID 10691
Creation 2012-03-05 (Christophe Dunand)
Last sequence changes 2012-03-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-22 (Catherine Mathe (Scipio))
Peroxidase information: PcriCcP
Name PcriCcP
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Plicaturopsis
Organism Plicaturopsis crispa    [TaxId: 139390 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcriCcP
start..stop		 S start..stop
Fcbs109695CcP01 572 0 14..371 17..373
SnivCcP01 568 0 3..371 1..367
SlacCcP01 565 0 1..370 1..371
AthiCcP01 559 0 1..371 1..371
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1612724..1613017 294 N° 2 1612522..1612652 131 N° 3 1612169..1612439 271 N° 4 1612024..1612106 83
N° 5 1611820..1611969 150 N° 6 1611658..1611741 84 N° 7 1611479..1611581 103  
complement(join(1611479..1611581,1611658..1611741,1611820..1611969,1612024..1612 106,1612169..1612439,1612522..1612652,1612724..1613017))


exon

Literature and cross-references PcriCcP
DNA ref. JGI genome:   scaffold_3 (1613017..1611479)
Cluster/Prediction ref. JGI gene:   37408
Protein sequence: PcriCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   372
PWM (Da):   %s   40997.73  
PI (pH):   %s   9.31
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSFSSLRAPARNALRFPKAQQLRSSVRKYSTETPTPPKPKSSNNALVYGGIAAVALGGAGYLLSSEDARRSLGTVFKSSAQSAKASAGFTPTKEDYQKVYNKIAELLDEAGEYDDGSYGPVILRLAWHSSGTYDKDTNTGGSNYATMRFEPEALHGANAGLNVARGLMEKIKAEFPWISYGDLWTLGGVAAVQELQGPKIAWRPGRVDGFAKDATPDGRLPDAAQGSDHLRNIFYRMGFNDQEIVALSGAHALGRCHTDRSGFEGPWTFSPITLTNDYYKLLFEEKWVWRKWGGPKQLADKKTGSLMMLPTDYVLTQDKSFKKYAKAYAEDQDLFFKDFSAVVSKLFELGIPPKQFSSEPYTLKTLEEQKQ*

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTCTCCTCCCTCCGCGCGCCCGCTCGCAACGCCCTCCGCTTCCCAAAGGCGCAGCAGCTGCGCTCGTCGGTGCGTAAGTACTCGACAGAGACGCCGACGCCGCCCAAGCCCAAG
TCCAGCAACAACGCACTCGTGTACGGTGGTATTGCGGCCGTCGCCCTCGGCGGCGCCGGCTACCTCCTCTCCTCCGAGGACGCGCGCAGGTCGCTCGGCACGGTCTTCAAGTCGAGCGCA
CAGTCCGCCAAGGCGAGCGCGGGCTTCACGCCCACCAAGGAGGACTACCAGAAGGTGCGAGTGCGAGCGGCGCGGCTGCGTGGGAGTGTGCGTGTGTTGCTAACCAGTGCGTGTGTGGGG
TAAAGGTGTACAACAAAATTGCCGAGCTGCTGGACGAGGCTGGGGAATACGATGATGGGTCGTACGGCCCTGTGATCCTGCGTCTCGCCTGGCACAGTTCCGGCACCTACGACAAGGACA
CCAACACCGGTGGCAGGTCCGTATCCCCCCCTCTCCCAACTATCCATCCATCCATCCATACCTACCTATACTCACGTCCACGGCCTTGACCTTAACAGCAACTACGCGACGATGCGCTTC
GAGCCCGAGGCCCTGCACGGCGCGAACGCGGGGCTGAACGTCGCGCGCGGGCTGATGGAGAAGATCAAGGCGGAGTTCCCGTGGATCAGCTACGGCGACCTGTGGACCCTCGGCGGCGTG
GCGGCCGTGCAGGAGTTGCAGGGCCCGAAGATTGCGTGGAGGCCTGGCCGGGTGGACGGGTTCGCGAAGGATGCGACGCCCGATGGCAGGCTGCCGGACGCGGCGCAGGGGTCTGATCAC
CTTCGGAATGTGAGTTATTTGAATTGGTTGGTTGATGGGAGGCTGGGGCTGATGGATGGATGCGGGTGTAGATCTTTTACCGTATGGGCTTCAATGACCAGGAGATTGTTGCGCTCTCCG
GTGCGCATGCGCTCGGGCGCTGCCACACTGACCGGTACGTCGCCCACCTACTCAACCGCACCACTCCCTCTTACTTAGCATTCAACAGCTCGGGCTTCGAGGGCCCCTGGACGTTCTCCC
CCATCACGCTCACCAACGACTACTACAAGCTCCTCTTCGAGGAGAAGTGGGTCTGGCGCAAGTGGGGCGGGCCCAAGCAGCTCGCGGATAAGAAGACCGGCTCGCTCATGATGCTCCCGT
ACGTCCCTCGATTGCACACATCTATATATGGAGGAGGAGGAGGAGGTGGCTGATGTGTTACTGGACTGGCTGGTAGGACGGACTACGTGCTGACGCAGGACAAGAGCTTCAAGAAGTACG
CGAAGGCATACGCCGAGGATCAGGACCTCTTCTTCAAAGAGTACGTCCTTTCTTTCTCTTTCTCTTTCTATGTCCCCCACGCATGCCTAATGCTAACCTAACCTAACGCATGGCAGCTTC
TCCGCGGTCGTGAGCAAGCTCTTCGAGCTCGGCATCCCGCCGAAGCAGTTCTCCTCCGAGCCGTATACGCTGAAGACGCTCGAGGAGCAGAAGCAGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTCTCCTCCCTCCGCGCGCCCGCTCGCAACGCCCTCCGCTTCCCAAAGGCGCAGCAGCTGCGCTCGTCGGTGCGTAAGTACTCGACAGAGACGCCGACGCCGCCCAAGCCCAAG
TCCAGCAACAACGCACTCGTGTACGGTGGTATTGCGGCCGTCGCCCTCGGCGGCGCCGGCTACCTCCTCTCCTCCGAGGACGCGCGCAGGTCGCTCGGCACGGTCTTCAAGTCGAGCGCA
CAGTCCGCCAAGGCGAGCGCGGGCTTCACGCCCACCAAGGAGGACTACCAGAAGGTGTACAACAAAATTGCCGAGCTGCTGGACGAGGCTGGGGAATACGATGATGGGTCGTACGGCCCT
GTGATCCTGCGTCTCGCCTGGCACAGTTCCGGCACCTACGACAAGGACACCAACACCGGTGGCAGCAACTACGCGACGATGCGCTTCGAGCCCGAGGCCCTGCACGGCGCGAACGCGGGG
CTGAACGTCGCGCGCGGGCTGATGGAGAAGATCAAGGCGGAGTTCCCGTGGATCAGCTACGGCGACCTGTGGACCCTCGGCGGCGTGGCGGCCGTGCAGGAGTTGCAGGGCCCGAAGATT
GCGTGGAGGCCTGGCCGGGTGGACGGGTTCGCGAAGGATGCGACGCCCGATGGCAGGCTGCCGGACGCGGCGCAGGGGTCTGATCACCTTCGGAATATCTTTTACCGTATGGGCTTCAAT
GACCAGGAGATTGTTGCGCTCTCCGGTGCGCATGCGCTCGGGCGCTGCCACACTGACCGCTCGGGCTTCGAGGGCCCCTGGACGTTCTCCCCCATCACGCTCACCAACGACTACTACAAG
CTCCTCTTCGAGGAGAAGTGGGTCTGGCGCAAGTGGGGCGGGCCCAAGCAGCTCGCGGATAAGAAGACCGGCTCGCTCATGATGCTCCCGACGGACTACGTGCTGACGCAGGACAAGAGC
TTCAAGAAGTACGCGAAGGCATACGCCGAGGATCAGGACCTCTTCTTCAAAGACTTCTCCGCGGTCGTGAGCAAGCTCTTCGAGCTCGGCATCCCGCCGAAGCAGTTCTCCTCCGAGCCG
TATACGCTGAAGACGCTCGAGGAGCAGAAGCAGTAG

Retrieve as FASTA