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Entry information : GmarDyPrx03
Entry ID 10705
Creation 2012-03-06 (Christophe Dunand)
Last sequence changes 2012-03-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarDyPrx03
Name GmarDyPrx03
Class DyP-type peroxidase D    [Orthogroup: DyPrxD001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarDyPrx03
start..stop		 S start..stop
GmarDyPrx04 844 0 1..502 1..511
GmarDyPrx02 767 0 25..502 27..500
HcyDyPrx01 672 0 26..502 24..502
AthiDyPrx01 575 0 27..501 5..471
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10705' 'complement(join(599036..599201,599256..599310,599369..599634,599690..599750,599805..600103,600167..600471,600530..600773,600832..600941))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 600832..600941 108 N° 2 600530..600773 242 N° 3 600167..600471 303 N° 4 599805..600103 297
N° 5 599690..599750 59 N° 6 599369..599634 264 N° 7 599256..599310 53 N° 8 599036..599201 164
complement(join(599036..599201,599256..599310,599369..599634,599690..599750,5998 05..600103,600167..600471,600530..600773,600832..600941))


exon

Literature and cross-references GmarDyPrx03
DNA ref. JGI genome:   scaffold_26 (600941..599036)
Cluster/Prediction ref. JGI gene:   159433
Protein sequence: GmarDyPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   501 (302)
PWM (Da):   %s   55288.57 (32227.8)  
PI (pH):   %s   6.81 (4.59) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATQQPLPPVTLPPPTPPNPAPTPVSLKLENIQGDILSGLPKKTETLYFFQITDAVKFRKDLKKFIPLVKSVAQVLKDREEIEKHKRDHHASVLHGFRPILIPLVGVNISFSHFGFKKLG
IDDTKLIDTAFLDGQRFDAGANLGDKGSGSGQDFVPDWEEPFKKEIHGVIILAGDSHPSVDKKLQEIKRIFDVGGRTSSISEITSVQGDARPGDQSAHEHFGYLDGVSNPAIIGFDTNPP
PGPAPVRAGAIILGQDGDESKTERAPWMVDGSFLVFRYLFQKVPEFDDFVFRNRLKGPGMSDKEGADLLGARLIGRWKSGAPVDLSPFQDDPELGADPQRNNNFHFSAELNFQKLCPFAA
HIRKTLPRADLESRRISIERNRIMRRGIQFGPEVTRAEKLAKKTFHGRGLIFACYQSSITSGFQFLQSSWVNNTTFPPFETTPEVPGVDPILGQGTDRKLTGTDPNNPAAELNLDDEWVI
PRGGEYFFSPSIQGLTNTIAA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTCAGCAACCCCTGCCTCCCGTCACTCTCCCCCCTCCTACTCCTCCCAACCCAGCTCCTACACCTGTTTCCCTTAAACTCGAGAATATCCAGGGTGACATCTTGTGGGTGTAT
CGTCATTTTGCCATTAATTATCCAGTGTTGATGAATTCGTAATCGTAGGAGAGCGGCCTTCCCAAGAAGACAGAGACTTTGTATTTCTTCCAAATCACAGATGCTGTCAAGTTCCGCAAG
GACCTCAAGAAATTCATACCCCTGGTCAAGAGCGTCGCCCAAGTGCTTAAAGACAGAGAGGAGATAGAGAAGCATAAACGTGACCATCATGCCAGTGTACTTCATGGCTTTAGACCTATC
CTCATCCCATTGGTCGGCGTCAACATTTCTTTCTCCCACTTCGGTTTCAAGAAGGTAAATAGGTTTCATCTTGATACAGATCCGTCATATGTACTCACTCGAGGTCGTGCAGCTCTCGGA
ATCGATGACACCAAGTTAATTGACACTGCCTTCCTCGACGGGCAGCGTTTTGACGCTGGCGCCAACCTCGGGGACAAAGGTAGTGGCTCTGGACAAGACTTCGTCCCAGATTGGGAAGAA
CCTTTCAAGAAGGAGATCCATGGTGTCATTATCCTCGCTGGTGATAGCCACCCCAGCGTCGACAAGAAACTTCAAGAGATCAAGCGCATCTTCGACGTTGGCGGTCGTACATCGTCCATT
TCAGAGATCACCTCCGTTCAGGGCGACGCTCGCCCAGGAGACCAATCAGCCCATGAGCAGTAAGTGGTCAACATTTCTTTTGAGTGTCCAACCACCTTCTGATATCCCAAATCGCGGAAC
AGCTCTTTGGATACCTCGATGGCGTGTCTAACCCTGCCATCATCGGATTCGACACCAATCCTCCACCAGGACCTGCTCCAGTTCGTGCAGGTGCAATCATCCTCGGCCAGGACGGCGACG
AAAGCAAGACCGAGCGTGCGCCATGGATGGTTGACGGAAGCTTCCTCGTTTTCAGATACCTCTTCCAGAAAGTGCCAGAGTTCGACGACTTTGTGTTCAGGAATCGACTCAAGGGCCCAG
GAATGTCTGACAAGGAAGGTGCTGACCTCCTTGGAGCACGTCTCATCGGTCGCTGGAAGAGTGGTGCGTGATTTCCGTATCCTTTGACTCGGGTTATAGACTTAATTTTCTTCGAAGGTG
TGCTCCTGTTGATCTTTCTCCATTCCAGGATGACCCAGAACTCGGAGCTGATCCCCAAAGGTAATAAATTAGTCAAATCTTTGAAAATACCTTAGCTGACTTTACCTCGTTGTAGGAGAA
TAACAACTTCCACTTCTCGGCTGAGCTTAACTTCCAGAAACTTTGCCCATTCGCAGCGCACATCCGCAAGACTCTTCCCCGTGCCGATCTCGAGAGTCGTAGGATCTCCATTGAGAGGAA
TCGTATCATGCGTCGAGGAATTCAGTTTGGACCTGAAGTCACCAGGGCCGAGAAACTGGCAAAGAAGACATTCCATGGTCGTGGATTGATCTTCGCCTGCTACCAGAGCAGCATCACCAG
TGGCTTCCAATTCCTTCAGAGCAGTGAGCAGTAATTTGTCAAAATGGTGTGATAGTCCTCTGACGCGGCTTGCTCCTCCAGGCGCTGGGTCAACAATACCACGTTCCCACCTTTTGAAAC
CACACCAGAAGTTCCTGGGTAGGCAGTTATCTTTCCTAGTTTGCCGAAACTGCTGAACGTAGGGTAATACAGAGAGTCGACCCGATTCTCGGTCAAGGTACAGACCGTAAATTGACAGGC
ACTGACCCCAACAACCCTGCTGCTGAGCTTAATCTTGATGACGAATGGGTAATCCCTCGTGGCGGAGAATACTTCTTCAGCCCGTCTATCCAGGGGTTGACCAACACAATCGCCGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACTCAGCAACCCCTGCCTCCCGTCACTCTCCCCCCTCCTACTCCTCCCAACCCAGCTCCTACACCTGTTTCCCTTAAACTCGAGAATATCCAGGGTGACATCTTGAGCGGCCTT
CCCAAGAAGACAGAGACTTTGTATTTCTTCCAAATCACAGATGCTGTCAAGTTCCGCAAGGACCTCAAGAAATTCATACCCCTGGTCAAGAGCGTCGCCCAAGTGCTTAAAGACAGAGAG
GAGATAGAGAAGCATAAACGTGACCATCATGCCAGTGTACTTCATGGCTTTAGACCTATCCTCATCCCATTGGTCGGCGTCAACATTTCTTTCTCCCACTTCGGTTTCAAGAAGCTCGGA
ATCGATGACACCAAGTTAATTGACACTGCCTTCCTCGACGGGCAGCGTTTTGACGCTGGCGCCAACCTCGGGGACAAAGGTAGTGGCTCTGGACAAGACTTCGTCCCAGATTGGGAAGAA
CCTTTCAAGAAGGAGATCCATGGTGTCATTATCCTCGCTGGTGATAGCCACCCCAGCGTCGACAAGAAACTTCAAGAGATCAAGCGCATCTTCGACGTTGGCGGTCGTACATCGTCCATT
TCAGAGATCACCTCCGTTCAGGGCGACGCTCGCCCAGGAGACCAATCAGCCCATGAGCACTTTGGATACCTCGATGGCGTGTCTAACCCTGCCATCATCGGATTCGACACCAATCCTCCA
CCAGGACCTGCTCCAGTTCGTGCAGGTGCAATCATCCTCGGCCAGGACGGCGACGAAAGCAAGACCGAGCGTGCGCCATGGATGGTTGACGGAAGCTTCCTCGTTTTCAGATACCTCTTC
CAGAAAGTGCCAGAGTTCGACGACTTTGTGTTCAGGAATCGACTCAAGGGCCCAGGAATGTCTGACAAGGAAGGTGCTGACCTCCTTGGAGCACGTCTCATCGGTCGCTGGAAGAGTGGT
GCTCCTGTTGATCTTTCTCCATTCCAGGATGACCCAGAACTCGGAGCTGATCCCCAAAGGAATAACAACTTCCACTTCTCGGCTGAGCTTAACTTCCAGAAACTTTGCCCATTCGCAGCG
CACATCCGCAAGACTCTTCCCCGTGCCGATCTCGAGAGTCGTAGGATCTCCATTGAGAGGAATCGTATCATGCGTCGAGGAATTCAGTTTGGACCTGAAGTCACCAGGGCCGAGAAACTG
GCAAAGAAGACATTCCATGGTCGTGGATTGATCTTCGCCTGCTACCAGAGCAGCATCACCAGTGGCTTCCAATTCCTTCAGAGCAGCTGGGTCAACAATACCACGTTCCCACCTTTTGAA
ACCACACCAGAAGTTCCTGGAGTCGACCCGATTCTCGGTCAAGGTACAGACCGTAAATTGACAGGCACTGACCCCAACAACCCTGCTGCTGAGCTTAATCTTGATGACGAATGGGTAATC
CCTCGTGGCGGAGAATACTTCTTCAGCCCGTCTATCCAGGGGTTGACCAACACAATCGCCGCATAA

Retrieve as FASTA