Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
546 (524) |
PWM (Da): |
56597.47 (54530.4) |
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PI (pH): |
8.25 (7.94) |
Peptide Signal: |
cut: 23 range:23-546 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSPSLSAVSLTALVAAAQGVRGAYYPSAKYAALEHLLVDSTGHNA NTFYKAVTPCGNYVSENSTKTGRVTSAQWMRVAFHDFATADVAAGTGGLDASIVFEYTRPENSGQAFPDSFNYWK YYVGAQTSFSDIIALGTVAAISSCGGPQLVYSAGRIDATAAGQFGVPEPDEGLTDTLARFAGAGISQTDAIKLTACGHTVGSVHHAGFPLVVGTDAVNANNTQGGINMDTTGTTYDNRIA QEYVAGTTKNPLVTSFNVSQRSDLRLFSSDNNATMSTLAESSSLFASECKRLTTQMLNTVPSGVSLTEITPIAVKPVNVTLTVNSAGTVTFSGAIRRRKVTITYTTADGKSTVTVPATTS SSLVGSSTYLGGAATYYYAFSASVKGSSGIKSFVVKTQESSKAAVRTSGPFTFQDTVAFLPGSTSGKANTSALTISGTLSAAVRTDRKVKSVEAVITVPQPRDDGVPKPALATYTVPLSY VRTLGRSSFALYQASGSTSLPSSLNYTLAAPLAAGASFDIVATLNDGSTVKDEYRTIQEASFTIV |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (4 introns). Incorrect prediction from JGI (last exon is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCTCCGTCACTCAGCGCAGTTTCCCTCACGGCCCTTGTTGCGGCTGCCCAAGGAGTTAGGGGCGCGTACTACCCCTCCGCGAAGTACGCAGCGCTCGAGCATCTGCTGGTCGACTCC ACCGGCCACAATGCGAATACATTCTACAAAGCCGTGACGCCCTGCGGCAATTACGTCTCGGAGAACAGCACCAAGACGGGCAGGGTCACCTCTGCGCAATGGATGCGAGTTGCCTTCCAT GACTTCGCCACCGCCGATGTCGCCGCCGGTACGGGAGGCTTGGACGCAAGTATTGTCTTCGAGTACACTCGCCCAGAGAACTCGGGGCAGGCCTTCCCCGACAGCTTCAACTACTGGAAG TACTACGTCGGCGCTCAGACGAGCTCTGTAAGTCCCGCTCTCTTTGGCTGTTCCTTGCCATGACTGACATTGACGCGCCGGGCTAGTTTCCGACATAATCGCGTTGGGCACGGTCGCCGC TATCTCGTCTTGCGGTGGGCCGCAGCTGGTGTACAGCGCCGGTCGTATTGATGCGACTGCCGCCGGCCAATTCGGCGTCCCCGAACCTGACGAGGGCCTCACCGACACCCTTGCACGGTT CGCCGGAGCGGGTATATCGCAGACCGATGCGATCAAGCTCACTGCCTGTGGTCACACGGTTGGTAGCGTTCACCACGCTGGTTTCCCGCTCGTCGTCGGGACGGACGCTGTCAACGCCAA CAACACCCAAGGCGGCATCAACATGGACACCACCGGTACCACCTATGATAACAGGATATGTAAGTTTCAACTTCTTTGCGGCAATCGCTCTCGCTGACCTTCTCCGTTTCTTAGTGCGCA GGAGTACGTGGCTGGCACGACCAAGAACCCGCTGGTCACGTCTTTCAATGTCTCCCAGCGCTCAGACTTGCGCCTGTTCTCTTCCGACAATAACGCGACGATGTCCACACGTGGGTCTAT TGCTATCCCTGCTAGTGCAAATCCGTCCTGACCATTGGACGCACAGATTGGCCGAGTCGAGCAGCCTCTTCGCCTCTGAGTGCAAGCGCCTCACTACGCAGATGCTGAACACCGTTCCCA GCGGTGTATCCCTAACCGAGATCACGCCCATCGCCGTGAAGCCGGTCAATGTTACTCTCACCGTCAACTCTGCGGGAACCGTGACCTTCTCCGGTGCTATCCGCGTAAAAGTAGCGAGTG ATGCGATCATCGTGCTATCCATTCACACGTTCGATTTATCCTAGCTTCTCGGAACCCAGTTCTCCGCCAACTCAGGACGGAAGGTCACTATCACCTATACCACCGCGGATGGCAAGTCGA CGGTTACCGTGCCCGCTACGACGTCGTCTTCCCTCGTCGGCTCCTCGACCTACCTTGGCGGCGCGGCGACCTACTACTACGCTTTCTCTGCGTCGGTCAAAGGCTCAAGCGGCATAAAGT CCTTCGTCGTCAAAACTCAGGAGAGCTCGAAGGCTGCGGTGCGGACCTCCGGCCCATTCACCTTCCAGGACACTGTTGCCTTCCTCCCTGGCTCCACCAGTGGCAAGGCCAACACCTCCG CGCTCACCATCTCCGGTACGCTCAGCGCTGCCGTCCGCACAGACCGCAAGGTGAAGAGCGTGGAAGCCGTCATCACCGTCCCGCAGCCGCGCGACGACGGCGTGCCGAAACCGGCGCTGG CGACGTACACCGTCCCGCTGTCGTACGTCCGCACGCTCGGCAGGTCGAGTTTCGCACTCTACCAGGCCTCGGGTTCGACTTCGCTCCCGTCCTCGCTCAACTACACACTCGCTGCCCCGC TCGCGGCTGGTGCATCGTTCGACATCGTGGCGACGCTCAATGACGGCAGCACCGTTAAGGACGAGTACCGCACCATCCAGGAGGCGTCCTTTACCATCGTATAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCTCCGTCACTCAGCGCAGTTTCCCTCACGGCCCTTGTTGCGGCTGCCCAAGGAGTTAGGGGCGCGTACTACCCCTCCGCGAAGTACGCAGCGCTCGAGCATCTGCTGGTCGACTCC ACCGGCCACAATGCGAATACATTCTACAAAGCCGTGACGCCCTGCGGCAATTACGTCTCGGAGAACAGCACCAAGACGGGCAGGGTCACCTCTGCGCAATGGATGCGAGTTGCCTTCCAT GACTTCGCCACCGCCGATGTCGCCGCCGGTACGGGAGGCTTGGACGCAAGTATTGTCTTCGAGTACACTCGCCCAGAGAACTCGGGGCAGGCCTTCCCCGACAGCTTCAACTACTGGAAG TACTACGTCGGCGCTCAGACGAGCTTTTCCGACATAATCGCGTTGGGCACGGTCGCCGCTATCTCGTCTTGCGGTGGGCCGCAGCTGGTGTACAGCGCCGGTCGTATTGATGCGACTGCC GCCGGCCAATTCGGCGTCCCCGAACCTGACGAGGGCCTCACCGACACCCTTGCACGGTTCGCCGGAGCGGGTATATCGCAGACCGATGCGATCAAGCTCACTGCCTGTGGTCACACGGTT GGTAGCGTTCACCACGCTGGTTTCCCGCTCGTCGTCGGGACGGACGCTGTCAACGCCAACAACACCCAAGGCGGCATCAACATGGACACCACCGGTACCACCTATGATAACAGGATTGCG CAGGAGTACGTGGCTGGCACGACCAAGAACCCGCTGGTCACGTCTTTCAATGTCTCCCAGCGCTCAGACTTGCGCCTGTTCTCTTCCGACAATAACGCGACGATGTCCACATTGGCCGAG TCGAGCAGCCTCTTCGCCTCTGAGTGCAAGCGCCTCACTACGCAGATGCTGAACACCGTTCCCAGCGGTGTATCCCTAACCGAGATCACGCCCATCGCCGTGAAGCCGGTCAATGTTACT CTCACCGTCAACTCTGCGGGAACCGTGACCTTCTCCGGTGCTATCCGCGTAAGACGGAAGGTCACTATCACCTATACCACCGCGGATGGCAAGTCGACGGTTACCGTGCCCGCTACGACG TCGTCTTCCCTCGTCGGCTCCTCGACCTACCTTGGCGGCGCGGCGACCTACTACTACGCTTTCTCTGCGTCGGTCAAAGGCTCAAGCGGCATAAAGTCCTTCGTCGTCAAAACTCAGGAG AGCTCGAAGGCTGCGGTGCGGACCTCCGGCCCATTCACCTTCCAGGACACTGTTGCCTTCCTCCCTGGCTCCACCAGTGGCAAGGCCAACACCTCCGCGCTCACCATCTCCGGTACGCTC AGCGCTGCCGTCCGCACAGACCGCAAGGTGAAGAGCGTGGAAGCCGTCATCACCGTCCCGCAGCCGCGCGACGACGGCGTGCCGAAACCGGCGCTGGCGACGTACACCGTCCCGCTGTCG TACGTCCGCACGCTCGGCAGGTCGAGTTTCGCACTCTACCAGGCCTCGGGTTCGACTTCGCTCCCGTCCTCGCTCAACTACACACTCGCTGCCCCGCTCGCGGCTGGTGCATCGTTCGAC ATCGTGGCGACGCTCAATGACGGCAGCACCGTTAAGGACGAGTACCGCACCATCCAGGAGGCGTCCTTTACCATCGTATAA |
Retrieve as FASTA
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