Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
301 |
PWM (Da): |
33504.52 |
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PI (pH):
| 5.3 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MPAPSPNSSSSSNKGDYEAVKRAIAKIIPQKGYDDGSAGPVLVRLAWHASGTYDAETKTGGSNGAGMRYECEGGDPANAGLEHARLFLEPIKEQFPWITYADLWTLAGATAIEEMGGPKIKWKPGRTDFVDDSCPPRGRLPDGAQAEEHLRFIFYRMGFNDQEIVALSGAHSLGRCHADRSGFEGPWSVTPTKFSTQYFKMLHKFKWEKKEWQGPIQYKNEDLGEELMMLPTDLALISDPAFKKWVEIYAGDRDKFYQDFANVFEKLIELGVDRSEPYEAAPQMSKEAGEKKEQEAKAKI* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (5 introns). Incorrect prediction from JGI (PS and last exon are missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCCCGCACCGAGTCCGAATTCGTCTAGTTCGTCCAACAAGGGAGACTACGAAGCAGTCAAGCGCGCCATCGCAAAGATCATCCCCCAGAAAGGTTACGACGATGGGAGTGCAGGTCCA GTCCTCGTCAGGCAAGCGCCACCTCTCTCCCATCTTTTGCTCCCCCACTCGGCGGCGACTGACTCGCTCCCTCCTCGCTCCTCTCCGCTCTCTCTGTACGACTGCAGGTTGGCTTGGCAC GCTAGCGGTACGTACGATGCAGAAACCAAGACGGGCGGTTCGAACGGTGCAGGAATGAGGTGAGAGCCCAAACTACTCGCCCGAGTTCTTCCGCATGAAAAATCAAAACTCGAGCTCATC TCTCTGTTCAGGTATGAATGCGAAGGAGGAGATCCCGCCAAGTGAGTGAACCCTCTTGTACACCCTCTCTCTCAACTACCGATCTCCGCGGCTCACGCGCTCGAATTCCGCAAACAGTGC CGGTTTGGAACACGCGAGATTGTTCCTCGAACCGATCAAAGAACAGTTCCCTTGGATCACGTACGCCGATCTGTGGACTCTGGCCGGTGCGACTGCGATCGAAGAGATGGGAGGTCCCAA GATCAAGTGGAAACCTGGAAGAACTGATTTCGTCGACGATTCGAAAGTAAGAAAACTTTTGCCTTCTCTCTCTCTCTCTCTCTCTTTCTCTGTCGCTCCCAGTAAACCTGATCAGACCCC TGACCTGTTCTCTGTGTGTCTAGTGTCCTCCTCGAGGTAGGTTACCAGACGGAGCTCAAGCCGAAGAACACCTCCGATTCATTTTCTACCGAATGGGGTTCAACGACCAAGAGATTGTCG CCCTCTCGGGGGCCCATTCTCTCGGTCGCTGTCACGCCGACCGTTCCGGGTTCGAAGGACCTTGGTCGGTCACGCCGACAAAGTTCAGTACTCAGTACTTTAAAATGTTGCACAAGTTCA AATGGGAGAAGAAGGAATGGCAAGGTCCGATTCAATACAAGGTTAACTTTAGAAAACACCCTCTCTACTCTCTCTCTCATATTCTTTTCGCCTTCTGACCCTCTCGTGATTCTTTGGGTC GGAATTATCAAATATAGAACGAAGATCTAGGAGAAGAATTAATGATGCTACCAACGGATTTGGCCTTGATCTCTGATCCCGCGTTCAAGAAATGGGTCGAGATCTACGCTGGAGACCGAG ACAAGTTCTACCAAGATTTCGCAAACGTGTTTGAGAAATTGATCGAGTTGGGAGTCGATCGGAGTGAACCTGTTGAGTTTCTTTCTTTTTTTTCTCTCACTCTCTCTCTCTCGTGGGAAT CATCCATGTGAGGTGTGTATACTGACTCGTCTCCCTTCGAATTTGTCGGGCGTAGTACGAGGCTGCACCTCAAATGTCAAAGGAAGCGGGAGAGAAGAAGGAACAAGAAGCGAAAGCAAA GATCTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCCCGCACCGAGTCCGAATTCGTCTAGTTCGTCCAACAAGGGAGACTACGAAGCAGTCAAGCGCGCCATCGCAAAGATCATCCCCCAGAAAGGTTACGACGATGGGAGTGCAGGTCCA GTCCTCGTCAGGTTGGCTTGGCACGCTAGCGGTACGTACGATGCAGAAACCAAGACGGGCGGTTCGAACGGTGCAGGAATGAGGTATGAATGCGAAGGAGGAGATCCCGCCAATGCCGGT TTGGAACACGCGAGATTGTTCCTCGAACCGATCAAAGAACAGTTCCCTTGGATCACGTACGCCGATCTGTGGACTCTGGCCGGTGCGACTGCGATCGAAGAGATGGGAGGTCCCAAGATC AAGTGGAAACCTGGAAGAACTGATTTCGTCGACGATTCGAAATGTCCTCCTCGAGGTAGGTTACCAGACGGAGCTCAAGCCGAAGAACACCTCCGATTCATTTTCTACCGAATGGGGTTC AACGACCAAGAGATTGTCGCCCTCTCGGGGGCCCATTCTCTCGGTCGCTGTCACGCCGACCGTTCCGGGTTCGAAGGACCTTGGTCGGTCACGCCGACAAAGTTCAGTACTCAGTACTTT AAAATGTTGCACAAGTTCAAATGGGAGAAGAAGGAATGGCAAGGTCCGATTCAATACAAGAACGAAGATCTAGGAGAAGAATTAATGATGCTACCAACGGATTTGGCCTTGATCTCTGAT CCCGCGTTCAAGAAATGGGTCGAGATCTACGCTGGAGACCGAGACAAGTTCTACCAAGATTTCGCAAACGTGTTTGAGAAATTGATCGAGTTGGGAGTCGATCGGAGTGAACCTTACGAG GCTGCACCTCAAATGTCAAAGGAAGCGGGAGAGAAGAAGGAACAAGAAGCGAAAGCAAAGATCTAG |
Retrieve as FASTA
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