1. Browse the Database
  2. View Redoxidase
Entry information : SrosCcP02 (Sporo-CCP2)
Entry ID 10724
Creation 2012-03-08 (Christophe Dunand)
Last sequence changes 2012-03-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-27 (Catherine Mathe (Scipio))
Peroxidase information: SrosCcP02 (Sporo-CCP2)
Name (synonym) SrosCcP02 (Sporo-CCP2)
Class Cytochrome C peroxidase    [Orthogroup: CcP002]
Taxonomy Eukaryota Fungi Basidiomycota Sporobolomyces
Organism Sporobolomyces roseus    [TaxId: 40563 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SrosCcP02
start..stop		 S start..stop
RgraCcP01 491 2.06e-177 2..301 5..304
RmucCcP1_C2.5t1 471 7.5e-170 2..301 4..302
MvioCcP01 469 8.94e-169 10..290 2..281
CqueCcP01 421 7.27e-150 12..290 3..288
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 18003..18133 129 N° 2 18230..18301 70 N° 3 18374..18403 28 N° 4 18480..18648 167
N° 5 18746..19003 256 N° 6 19100..19273 172 N° 7 19378..19449 70  
join(18003..18133,18230..18301,18374..18403,18480..18648,18746..19003,19100..192 73,19378..19449)


exon

Literature and cross-references SrosCcP02 (Sporo-CCP2)
DNA ref. JGI genome:   scaffold_5 (18003..19449)
Cluster/Prediction ref. JGI gene:   4970 [Incorrect prediction]
Protein sequence: SrosCcP02 (Sporo-CCP2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   301 (335)
PWM (Da):   %s   33504.52 (35476.5)  
PI (pH):   %s   5.3 (5.11) Peptide Signal:   %s   cut: 25 range:25-359
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPAPSPNSSSSSNKGDYEAVKRAIAKIIPQKGYDDGSAGPVLVRLAWHASGTYDAETKTGGSNGAGMRYECEGGDPANAGLEHARLFLEPIKEQFPWITYADLWTLAGATAIEEMGGPKIKWKPGRTDFVDDSCPPRGRLPDGAQAEEHLRFIFYRMGFNDQE
IVALSGAHSLGRCHADRSGFEGPWSVTPTKFSTQYFKMLHKFKWEKKEWQGPIQYKNEDLGEELMMLPTDLALISDPAFKKWVEIYAGDRDKFYQDFANVFEKLIELGVDRSEPYEAAPQ
MSKEAGEKKEQEAKAKI*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns). Incorrect prediction from JGI (PS and last exon are missing).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGCACCGAGTCCGAATTCGTCTAGTTCGTCCAACAAGGGAGACTACGAAGCAGTCAAGCGCGCCATCGCAAAGATCATCCCCCAGAAAGGTTACGACGATGGGAGTGCAGGTCCA
GTCCTCGTCAGAGGCAAGCGCCACCTCTCTCCCATCTTTTGCTCCCCCACTCGGCGGCGACTGACTCGCTCCCTCCTCGCTCCTCTCCGCTCTCTCTGTACGACTGCAGGTTGGCTTGGC
ACGCTAGCGGTACGTACGATGCAGAAACCAAGACGGGCGGTTCGAACGGTGCAGGAATGAGAGGTGAGAGCCCAAACTACTCGCCCGAGTTCTTCCGCATGAAAAATCAAAACTCGAGCT
CATCTCTCTGTTCAGGTATGAATGCGAAGGAGGAGATCCCGCCAAAAGTGAGTGAACCCTCTTGTACACCCTCTCTCTCAACTACCGATCTCCGCGGCTCACGCGCTCGAATTCCGCAAA
CAGTGCCGGTTTGGAACACGCGAGATTGTTCCTCGAACCGATCAAAGAACAGTTCCCTTGGATCACGTACGCCGATCTGTGGACTCTGGCCGGTGCGACTGCGATCGAAGAGATGGGAGG
TCCCAAGATCAAGTGGAAACCTGGAAGAACTGATTTCGTCGACGATTCGAAAAAGTAAGAAAACTTTTGCCTTCTCTCTCTCTCTCTCTCTCTTTCTCTGTCGCTCCCAGTAAACCTGAT
CAGACCCCTGACCTGTTCTCTGTGTGTCTAGTGTCCTCCTCGAGGTAGGTTACCAGACGGAGCTCAAGCCGAAGAACACCTCCGATTCATTTTCTACCGAATGGGGTTCAACGACCAAGA
GATTGTCGCCCTCTCGGGGGCCCATTCTCTCGGTCGCTGTCACGCCGACCGTTCCGGGTTCGAAGGACCTTGGTCGGTCACGCCGACAAAGTTCAGTACTCAGTACTTTAAAATGTTGCA
CAAGTTCAAATGGGAGAAGAAGGAATGGCAAGGTCCGATTCAATACAAGAGGTTAACTTTAGAAAACACCCTCTCTACTCTCTCTCTCATATTCTTTTCGCCTTCTGACCCTCTCGTGAT
TCTTTGGGTCGGAATTATCAAATATAGAACGAAGATCTAGGAGAAGAATTAATGATGCTACCAACGGATTTGGCCTTGATCTCTGATCCCGCGTTCAAGAAATGGGTCGAGATCTACGCT
GGAGACCGAGACAAGTTCTACCAAGATTTCGCAAACGTGTTTGAGAAATTGATCGAGTTGGGAGTCGATCGGAGTGAACCTCTGTTGAGTTTCTTTCTTTTTTTTCTCTCACTCTCTCTC
TCTCGTGGGAATCATCCATGTGAGGTGTGTATACTGACTCGTCTCCCTTCGAATTTGTCGGGCGTAGTACGAGGCTGCACCTCAAATGTCAAAGGAAGCGGGAGAGAAGAAGGAACAAGA
AGCGAAAGCAAAGATCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGCACCGAGTCCGAATTCGTCTAGTTCGTCCAACAAGGGAGACTACGAAGCAGTCAAGCGCGCCATCGCAAAGATCATCCCCCAGAAAGGTTACGACGATGGGAGTGCAGGTCCA
GTCCTCGTCAGGTTGGCTTGGCACGCTAGCGGTACGTACGATGCAGAAACCAAGACGGGCGGTTCGAACGGTGCAGGAATGAGGTATGAATGCGAAGGAGGAGATCCCGCCAATGCCGGT
TTGGAACACGCGAGATTGTTCCTCGAACCGATCAAAGAACAGTTCCCTTGGATCACGTACGCCGATCTGTGGACTCTGGCCGGTGCGACTGCGATCGAAGAGATGGGAGGTCCCAAGATC
AAGTGGAAACCTGGAAGAACTGATTTCGTCGACGATTCGAAATGTCCTCCTCGAGGTAGGTTACCAGACGGAGCTCAAGCCGAAGAACACCTCCGATTCATTTTCTACCGAATGGGGTTC
AACGACCAAGAGATTGTCGCCCTCTCGGGGGCCCATTCTCTCGGTCGCTGTCACGCCGACCGTTCCGGGTTCGAAGGACCTTGGTCGGTCACGCCGACAAAGTTCAGTACTCAGTACTTT
AAAATGTTGCACAAGTTCAAATGGGAGAAGAAGGAATGGCAAGGTCCGATTCAATACAAGAACGAAGATCTAGGAGAAGAATTAATGATGCTACCAACGGATTTGGCCTTGATCTCTGAT
CCCGCGTTCAAGAAATGGGTCGAGATCTACGCTGGAGACCGAGACAAGTTCTACCAAGATTTCGCAAACGTGTTTGAGAAATTGATCGAGTTGGGAGTCGATCGGAGTGAACCTTACGAG
GCTGCACCTCAAATGTCAAAGGAAGCGGGAGAGAAGAAGGAACAAGAAGCGAAAGCAAAGATCTAG

Retrieve as FASTA