RedOxiBase: View Perox 10731

Entry information : JargLDS04

Entry ID	10731
Creation	2012-03-08 (Christophe Dunand)
Last sequence changes	2012-03-08 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2015-12-11 (Catherine Mathe)

Peroxidase information: JargLDS04

Name

JargLDS04

Class

Linoleate diol synthase (PGHS like) [Orthogroup: LDS003]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Jaapiaceae Jaapia

Organism

Jaapia argillacea [TaxId: 202697 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	JargLDS04 start..stop	S start..stop
JargLDS03	785	0	69..984	24..958
JargLDS03	170	7e-43	1079..1342	999..1267
PindLDS01	305	1e-85	155..1014	329..1174
CcinLDS02	284	5e-80	130..729	101..735
PplLDS02	282	2e-79	124..985	73..892

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	419877..420065	189	N° 2	420117..420266	150	N° 3	420325..420356	32	N° 4	420434..420512	79
N° 5	420563..420625	63	N° 6	420688..420909	222	N° 7	420961..421164	204	N° 8	421257..421337	81
N° 9	421397..421480	84	N° 10	421543..421643	101	N° 11	421708..421730	23	N° 12	421760..421870	111
N° 13	421969..422060	92	N° 14	422115..422174	60	N° 15	422231..422254	24	N° 16	422308..422350	43
N° 17	422412..422492	81	N° 18	422541..422781	241	N° 19	422845..422874	30	N° 20	422931..422952	22
N° 21	423005..423105	101	N° 22	423161..423236	76	N° 23	423302..423378	77	N° 24	423410..423566	157
N° 25	423616..423946	331	N° 26	424002..424160	159	N° 27	424215..424618	404	N° 28	424835..424915	81
N° 29	424972..425040	69	N° 30	425162..425234	73	N° 31	425343..425822	480	N° 32	425902..425990	89
join(419877..420065,420117..420266,420325..420356,420434..420512,420563..420625, 420688..420909,420961..421164,421257..421337,421397..421480,421543..421643,42170 8..421730,421760..421870,421969..422060,422115..422174,422231..422254,422308..42 2350,422412..422492,422541..422781,422845..422874,422931..422952,423005..423105, 423161..423236,423302..423378,423410..423566,423616..423946,424002..424160,42421 5..424618,424835..424915,424972..425040,425162..425234,425343..425822,425902..42 5990)

Literature and cross-references JargLDS04

DNA ref.	JGI genome: scaffold_31 (419877..425990)
Cluster/Prediction ref.	JGI gene: 50265

Protein sequence: JargLDS04

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	1342 (1314)
PWM (Da):	151059.93 (148016.5)
PI (pH):	5.19 (5.19)	Peptide Signal:	cut: 29 range:29-1342

Sequence 1384
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAALSATASLSLFSHISVMFLQVFDSMASKVPQAESLSSRTQFKWFGLEALNPPQVNPTEVAHLTILNLMKGREVDDRELMVQCFDLAFLRSSLIVPLKDQAAGSIEGHVRRTPPSLTAELPNTVEKLNPLQTPPDVGKVFDDLLSAKNEGFNPHPNKISGMAFAFATVISLTLSRTCPSKWEYNDTAHCFDLSPLYGLNEKEEELVRDKNGQGMLSPDCFCEDRRIFLMPAVSVLLVLWNRNHNFIARRLLIDKDSKWIDPSTVNPSADRKLHPDLADQDDKIFKTAHMINCGIFRNVVLEDFLKGLLGLPNDVLSSDGQKAKSMQQYRSRTEFSLLYNWSALASEEDMKWTEKTIQEIFNGKSPDTPTLADFQHVSGCCGHETNLANKYTPNLQDHHLRRFDCGGDDYIARLNTLNCWYTWVLKNGPLCVNNGDNGHEAGKGMESFTSFKEWNLSPDIITAATSLYGDIENLELYPGLQAEDPVCGSGFNFGHTMIYGILVEIITLVWDDPNLPKFTAKEMTDWGYNECLAQLDNGASGAVLPKVLLANLPQNYPYNNIYTLFPFTLPSATKDVLGPDLADYNTKRPEKTVVLKSEKDISAVFNDPESFPTMYGPKLRELTNRYGFLLGFDNTRLHDAEQVTISYALIPDRREMQRHAVYFAETVEGFIKETERSWISGSAINIVKDVINPTCSCWVCEAMYGLPQHSRDRKNHEAEVFKKFGDLYTNSQSHYLTFSFLFHIHESDEGWAVRKKALDAVKELATHIRDQVDVIKDDAEEGIIGRLNYAYNMLQSGECEVKPLSSTKFLKRLSLASGSLQRALGGFEKFQKFDDFKDFWGTKLQGAEQREPQDKRLSVQLDKNAEEEFKKLRLVSNVLILCIISSVGFARAWAHAVEFYLHKDCSKERNRIAELSQLDTAKGTDKGTDKSSDSEIMGYIREAQRLGQSPGLFRVVKKKPTTQQLEGLQVKEGDLIYADFRKAHIQKTCSEDRAVPPEDFPTQMDHPARVTENYTVPDEDAPTQTDRPVKVTEDYAVPGEDFPTQTDHPSKVVKDHAVPCEDVPTQMGDPTKVVEDPTNVFKAIFRLNITLADEHESSASHNPILSPYSNMFVDSNGKFTSIPQTLLIREKYTTRQVDSPRQSFGKVTTVESDYVLTIWGRLSALLALPSVPKLTLPSIPRPWVPLALHAQELRPSTPIEENPANITVATLEVFDPYHVEEIRLGLDNKPIPVKRTYERGRPYQLTIIDVDKRDMRVSIFVDGILRGVTTDFDLDKLIDCELDSRACVALNFSTGVIVILLGNHTVEVRWAGKEYANGTDDADWGGEDIRRFQMQVEDYAGS*

Retrieve as FASTA

Remarks

Complete sequence from genomic (31 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCAGCTCTTTCAGCAACAGCTTCTCTGTCCTTATTCAGTCATATCAGTGTGATGTTCCTCCAGGTCTTCGATTCAATGGCATCGAAGGTACCTCAGGCCGAGTCCCTATCCAGTCGC
ACCCAGTTCAAGTGGTTTGGTTTGGAGGCATTGAATCCACCTCAGGTCAATCCCACAGAGGTGGCCCATGTGCGATTTTTGTGCACTCTGTTGGAACACAACTCACAAAGCCCATCTTAG

CTTACTATTTTGAACCTCATGAAAGGAAGGGAGGTTGACGACAGGGAGCTGATGGTACAATGTTTTGATTTAGCGTTCCTTCGCTCCTCTCTGATTGTGCCTCTGAAAGATCAAGCTGCG
GGAAGCATTGAAGGACATGTCAGGCGCACCGTGTGACGCTTTGCGGAAATCGACATTCAATAAGATTTTGATTGAACTCCGTACATAGCCTCCTTCCTTGACTGCAGAACTCCCTAACAC
GTGCGCTGGTTAGTATATCACCCCAAGCTTCTCCCACTCCATCCTGCCAGCCCCTTGCATCACCTTTATGTGCGCAGTGTCGAGAAACTCAACCCACTGCAAACTCCTCCAGACGTAGGA
AAAGTATTTGATGATCTCCTCAGCGCCAAGAACGAGGTACGTGTGGCCTTTCAATTCTAAGCCTTGAAATAGTTTACACTTCATAGGGATTCAACCCTCACCCAAACAAAATCTCAGGCA
TGGCTTTTGCTTTTGCAACAGTTATCTCAGTGGGTCCCATCCTAGTACCTTTATCTTCGCAGCTTTCTGATGGTAAGAGGTTAATCTGCAGCTTACACTTTCCCGGACTTGCCCTTCTAA
ATGGGAGTACAATGATACTGCACACTGTTTTGATCTCTCACCCCTGTATGGGTTGAACGAGAAAGAGGAAGAGCTGGTCAGGGACAAGAATGGTCAGGGAATGCTGTCTCCAGATTGTTT
CTGCGAAGATCGCAGAATATTCTTGATGCCTGCAGTATCAGTGTTGTTGGTCCTTTGGAACAGGAATCATAATGTGCATTTGTATTGCAAGTCACTTATGGTCCTGACTTTTTGTGGTGG
ACAGTTTATTGCTCGTCGCCTCCTGATTGACAAAGATTCGAAATGGATAGACCCCTCCACAGTCAATCCCTCTGCTGATCGCAAACTTCACCCTGATTTAGCTGACCAAGATGACAAAAT
CTTCAAAACTGCTCACATGATCAACTGTGGCATCTTCAGAAATGTTGTCCTTGAAGATTTTCTGAAAGGACTTCTTGGACTGCCCAATGTGTGACCCAACGTGCATCTAAATCTCTTCGC
CAAGGTGAGTTCTCTATCTCTCTCAACTATCATTTCACATTGGGACACCATAGGAATTAGGATGTGTTATCAAGCGATGGTCAGAAGGCCAAAAGTATGCAACAATATCGATCGAGGACA
GAGTTTTCTCTTCTCTATAATGTGAGCCCCATCTGATTCCCCTTGCTTCCAACATGATTCATAATCAATTTCCTCCTTAGTGGTCTGCCCTAGCATCTGAGGAAGATATGAAGTGGACTG
AGAAGACTATACAAGAGATCTTCAACGGGAAGTCTCCAGACACAGTTTGTGGATTCTGTTTCATCTGTTTTCATTATCCTCGACCCTCATGCAAAACTGCCCATAGCCTACACTAGCTGA
CTTTCAACATGTCTCTGGTTGTTGTGGGCATGAGACCAATTTGGCCAACAAATATACCCCAAATCTGCAAGATCACCATTTGAGACGGTACACTTTCAAGATGATTTCCATTTTTCTTCA
CTGTGAGGCCTCACATAAAACTATCTATCAGCTTTGACTGTGGTGGTGATGATTGTCAGTTCAATGACAATGAAATTGCCAAGATATTGCAAGACTCAACACGCTCAACTGCTGGTACAC
CTGGGTCTTGAAAAATGGCCCCCTGTGTGTGAATAATGGAGACAATGGTCATGAAGCTGGCAAGGGAATGGAATGTATGTTCACTCAATGACTTCCAAAGGTCTTTGGGCCTCAAAGGTT
TGTCTTTTATCCTCTTACATTCTAGACTATTTTATCACCACAGGAACAACAGCCTTTACCTCCTTTAAGGAATGGAACTTGTCACCAGATATTATCACTGCAGCAACCAGTTTGTATGGT
GACATTGAGAATCTGGAGCTTTATGTATGTCTCTTCATGGGAATGTTTTTTGCAACCGCTGACTCTGACTGACCTCAGCCTGGTCTCCAAGCTGAAGATCCTGTCTGCGGAAGTGGTTTC
AACTTTGGACATACAATGGTGAGGTCCTGTGGAATTCAACAGAGGACACCACTAATAAATCCTTTGGGCCAAAGATCTATGGTATCTTGGTAGAGATTGTATGTTGTTGACTCTTCCAAA
TGGTGCTTATATCACTCATGTATTCATCAAGATAACCTTGGTTTGGGATGATCCAAACCTTCCTAAGTTTACAGGTGGGTTGCATTCTCTGTTGAATTCAATCTCTGCTTAGTAGGTTTT
ACTAAACTGAATTAGCAAAGGAAATGACAGACTGGGGTTATAATGAATGCTTAGCCCAGCTGGACAATGGTGCATCTGGAGCTGTCTTACCCAAAGGTGACTGAGATGTTATTTATTTGA
TCTTGCACTCACACATATACTCAGTTTTGCTTGCCAACCTTCCCCAAAACTACCCATACAACAATATATATACCCTCTTCCCATTCACATTGCCAAGTGCCACCAAGGATGTTCTAGGCC
CTGACCTGGCAGACTACAACACCAAGCGACCTGAGAAAACTGTAGTCTTAAAGAGCGAGAAAGATATCAGTGCAGTCTTCAATGACCCGGAAAGCTTTCCGACAATGTATGGACCAAAAC
TCAGGGAATTGACCAACAGATATGGGTGAGATGAAACTATCTATGTGCCTAGACACCCTTCTAACTCTCATTCACAAATCACTACTAGTTTCCTCCTTGGGTTTGACAATACCAGGCTGT
ATGTGGCTTCTGTCTTCCTGTCCCATCCCCCAGTGCTTATGTGCTCTCTTTTAGACATGATGCGGAACAGGTCACGGTGATACTACTCCTTGCTTCTCACATCTCGCGATTCATGAACAC
CCTCATAGATATCATATGCTCTGATCCCGGATAGGAGAGAGATGCAGAGACACGCAGTGTACTTTGCTGAAACAGTGGAGGGTTTTATCAAGGAAACTGAAAGGTCCTGGTATGCCTCCA
ATCCGTCACATTTTTGTCCTTCCATTTGTCCATCTCTGGATCAGGATCAGTGGCAGTGCTATCAATATTGTCAAAGATGTTATCAACCCGACTTGTAGCTGCTGGGTCTGTGAAGCAATG
GTAAGCTGAGAGGTTGTCCACACCCTTATTTCCATCCTTATTCTGGCTTTGATTCCCATCCATAGTATGGCCTTCCTCAGCACAGTCGTGATAGGAAGAACCATGAGGCTGAGGTATTCA
AAAAGTTTGGGGACCTGTATACGTTAGCATGTCTTTGCAATCCACACCTCCAGGAACTCACAATCACATTACCTCACGTTTAGTTTCCTTTTCCATATCCACGAGTCTGATGAGGGCTGG
GCTGTTCGCAAGAAGGCCTTGGACGCAGTGAAGGAACTCGCGACACATATCAGAGACCAGGTCGATGTGATCAAGGATGATGCTGAGGAGGTGAGTGCTTTCCCTTCCACTTGTTTGTGT
CGTCCAAACATTATTCCAGGGGATCATAGGTCGGCTCAATTACGCCTACAACATGCTACAGTCAGGGGAATGCGAAGTGAAGCCTCTATCGTCAACCAAGTTTCTCAAGAGATTGTCTCT
GGCAAGCGGAAGTTTACAACGTGCCCTTGGTGGTTTCGAAAAATTCCAGAAATTTGACGATTTCAAAGACTTTTGGGGAACAAAGTTGCAGGGAGCGGAACAAAGGGAGCCGCAGGACAA
AAGGCTCAGTGTCCAACTGGACAAAAATGCGGAAGAGGAGTTCAAGAAGCTCAGATTAGTGTCCAATGTTCTCATACTGTGCATTATATCTTCTGTGGGCTTTGCTCGAGGTAAGTAACC
CACTCTCGGTTGATTCCCTGCCTCACTTTTCATGAAATTATGCAGCCTGGGCCCATGCAGTCGAATTCTACTTGCACAAGGATTGCAGCAAGGAGAGAAATAGGATTGCAGAACTGTCAC
AGTTGGATACTGCGAAGGGTACTGACAAGGGTACTGACAAGTCTTCCGATAGTGAAATCATGGGCTATATCCGAGAAGCCCAAAGTGAGCGCTTTATTTGAATGATGCTGATAACACTGG
TCTCATATATCTCAATAGGGCTGGGTCAGTCCCCAGGACTCTTTCGTGTGGTCAAAAAGAAGCCCACAACACAGCAATTGGAGGGGCTGCAGGTCAAGGAGGGGGATCTGATATATGCAG
ACTTTCGCAAGGCACACATTCAAAAGACTTGTTCTGAAGACCGTGCAGTGCCCCCTGAGGATTTTCCTACACAGATGGACCACCCCGCCAGAGTCACTGAAAACTATACGGTGCCCGATG
AAGATGCTCCTACGCAGACAGACCGCCCTGTCAAAGTCACTGAAGACTATGCAGTGCCTGGCGAGGATTTTCCTACGCAAACGGACCACCCTTCCAAAGTTGTTAAAGATCATGCAGTGC
CCTGTGAAGATGTTCCTACACAGATGGGCGACCCCACTAAAGTTGTTGAAGACCCTACCAATGTCAACTGGAAGTGAAAGATGGATTCAGTTCAAGGCCTCGGGTTTCACAAGTGTCCTG
GAATCAGTTTCGTTGAGGCGGTCAGTCTCCATCCAGCTGGTGTTTTCGATTTTGTGCACTCATAGCACCCTTATCTTGCTGCAGACTATGCCGCCGGTGCTCGTTTCCAGTCCTTCGAGC
TTCGGTTTGGCACTAATGCCCCCTCCCTTCTTTTCTAGGTTTTCAAGGCAATATTTCGCTTGAACATTACCCTTGCTGATGAACATGAATCAAGTGCTAGTCACAACCCGATCCTCAGTG
TGGGTTAACCGCCTAAAAGGTTTTGGCGCTACTCACTCAACTTCTGTCCCTACAGCCATATTCGAATATGTTTGTCGACTCGAATGGGAAATTCACATCAATCCCTCAAACACTTCTGAT
AAGGGTCCGTGGTTTGGTCTCATCACCTCCTCCCAGCCCTTACCGACGTCTATCAAATTGTAGTATGATGCCCAACCGAGCCTACTTATTTTCTGCCGAACCTTCCTTGAAAACCTCCAT
TGCAGGAGAAATACACGACCCGACAAGTGGACAGTCCCAGACAAAGTTTTGGCAAGGTCACAACGGTGGAAAGCGATTGTAAGAGATCTCAAAGTGGGGACTGTAGTCATATTCCTCTTG
CTTACTCTATGTTTGTTCTCCTCATCTAAGTCGCCTTCCATCATGTCTGATTGCCATGTCCAACAGATGTCCTGACTATTTGGGGGAGATTGTCTGCCCTCCTGGCATTGCCCTCAGTGC
CAAAGCTCACCCTCCCTTCAATCCCTCGCCCATGGGTACCATTAGCATTACACGCGCAGGAGCTTCGTCCTTCGACGCCAATCGAAGAAAATCCTGCAAACATCACAGTTGCTACTTTGG
AGGTCTTCGATCCCTACCATGTAGAAGAGATACGTCTCGGTCTGGATAACAAACCCATTCCAGTCAAACGTACCTACGAGAGAGGGAGGCCATACCAGCTCACCATTATCGATGTCGATA
AACGCGACATGCGTGTGTCAATCTTTGTTGATGGGATACTGAGAGGAGTCACGACGGACTTCGACCTCGACAAGTTGATAGATTGTGAGTTGGACTCGCGGGCTTGTGTTGCTTTGAACT
TCAGCACTGGAGTCATTGTTATACTGTTGGGGAATCATACGGTTGAGGTTCGATGGGCGGGCAAAGGTGAGCATAAAAATTTACTCAACGAACTAACCTCTCACTTATGGAAACCCTTCT
TATGGACAACCGGTCATCTCCACAGAATATGCTAATGGGACAGACGATGCTGATTGGGGAGGTGAAGATATCCGTCGATTTCAAATGCAAGTTGAGGATTACGCTGGATCTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA