Entry information : JargLDS04
Entry ID 10731
Creation 2012-03-08 (Christophe Dunand)
Last sequence changes 2012-03-08 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2015-12-11 (Catherine Mathe)
Peroxidase information: JargLDS04
Name JargLDS04
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS003]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Jaapiaceae Jaapia
Organism Jaapia argillacea    [TaxId: 202697 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value JargLDS04
start..stop
S start..stop
JargLDS03 785 0 69..984 24..958
JargLDS03 170 7.52e-43 1079..1342 999..1267
PindLDS01 305 1.09e-85 155..1014 329..1174
CcinLDS02 284 5.57e-80 130..729 101..735
PplLDS02 282 2.39e-79 124..985 73..892
Gene structure Fichier Exons


exon

Literature and cross-references JargLDS04
DNA ref. JGI genome:   scaffold_31 (419877..425990)
Cluster/Prediction ref. JGI gene:   50265
Protein sequence: JargLDS04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1342 (1314)
PWM (Da):   %s   151059.93 (148016.5)  
PI (pH):   %s   5.19 (5.19) Peptide Signal:   %s   cut: 29 range:29-1342
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAALSATASLSLFSHISVMFLQVFDSMASKVPQAESLSSRTQFKWFGLEALNPPQVNPTEVAHLTILNLMKGREVDDRELMVQCFDLAFLRSSLIVPLKDQAAGSIEGHVRRTPPSLTAE
LPNTVEKLNPLQTPPDVGKVFDDLLSAKNEGFNPHPNKISGMAFAFATVISLTLSRTCPSKWEYNDTAHCFDLSPLYGLNEKEEELVRDKNGQGMLSPDCFCEDRRIFLMPAVSVLLVLW
NRNHNFIARRLLIDKDSKWIDPSTVNPSADRKLHPDLADQDDKIFKTAHMINCGIFRNVVLEDFLKGLLGLPNDVLSSDGQKAKSMQQYRSRTEFSLLYNWSALASEEDMKWTEKTIQEI
FNGKSPDTPTLADFQHVSGCCGHETNLANKYTPNLQDHHLRRFDCGGDDYIARLNTLNCWYTWVLKNGPLCVNNGDNGHEAGKGMESFTSFKEWNLSPDIITAATSLYGDIENLELYPGL
QAEDPVCGSGFNFGHTMIYGILVEIITLVWDDPNLPKFTAKEMTDWGYNECLAQLDNGASGAVLPKVLLANLPQNYPYNNIYTLFPFTLPSATKDVLGPDLADYNTKRPEKTVVLKSEKD
ISAVFNDPESFPTMYGPKLRELTNRYGFLLGFDNTRLHDAEQVTISYALIPDRREMQRHAVYFAETVEGFIKETERSWISGSAINIVKDVINPTCSCWVCEAMYGLPQHSRDRKNHEAEV
FKKFGDLYTNSQSHYLTFSFLFHIHESDEGWAVRKKALDAVKELATHIRDQVDVIKDDAEEGIIGRLNYAYNMLQSGECEVKPLSSTKFLKRLSLASGSLQRALGGFEKFQKFDDFKDFW
GTKLQGAEQREPQDKRLSVQLDKNAEEEFKKLRLVSNVLILCIISSVGFARAWAHAVEFYLHKDCSKERNRIAELSQLDTAKGTDKGTDKSSDSEIMGYIREAQRLGQSPGLFRVVKKKP
TTQQLEGLQVKEGDLIYADFRKAHIQKTCSEDRAVPPEDFPTQMDHPARVTENYTVPDEDAPTQTDRPVKVTEDYAVPGEDFPTQTDHPSKVVKDHAVPCEDVPTQMGDPTKVVEDPTNV
FKAIFRLNITLADEHESSASHNPILSPYSNMFVDSNGKFTSIPQTLLIREKYTTRQVDSPRQSFGKVTTVESDYVLTIWGRLSALLALPSVPKLTLPSIPRPWVPLALHAQELRPSTPIE
ENPANITVATLEVFDPYHVEEIRLGLDNKPIPVKRTYERGRPYQLTIIDVDKRDMRVSIFVDGILRGVTTDFDLDKLIDCELDSRACVALNFSTGVIVILLGNHTVEVRWAGKEYANGTD
DADWGGEDIRRFQMQVEDYAGS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (31 introns).
DNA
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CDS
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