Entry information : SreLDS
Entry ID 10736
Creation 2012-03-09 (Christophe Dunand)
Last sequence changes 2012-03-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-09 (Christophe Dunand)
Peroxidase information: SreLDS
Name SreLDS
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Basidiomycota Ustilaginomycetes Ustilaginaceae Sporisorium
Organism Sporisorium reilianum    [TaxId: 72558 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SreLDS
start..stop
S start..stop
UmLDS01 1948 0 12..1074 1..1063
SrosLDS01 568 0 93..1029 3..984
GluxLDS02 522 2.06e-168 95..757 76..759
SrosLDS02 511 1.32e-165 94..679 2..590
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10736' 'join(212763..212795,212909..216100)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 212763..212795 31 N° 2 212909..216100 3190  
join(212763..212795,212909..216100)


exon

Literature and cross-references SreLDS
Protein ref. UniGene:   .E6ZP36
DNA ref. GenBank:   FQ311434.1 (212763..216100)
Protein sequence: SreLDS
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1074 (1452)
PWM (Da):   %s   118811.98 (163083.1)  
PI (pH):   %s   5.84 (6.98) Peptide Signal:   %s   cut: 24 range:24-1475
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATMTTETMEQVKTFVKDKVNQTTDAAGLSATETRKKAQAAVKQA
KQKTSAATTTSIESLQMLLDQLNRSRIVNDVKLLGQAPNLLITGLTGGGLDDRKLLLEQLITLLASMPVTSNISRTLSDALIGIIW
GDLPHPAVSFLGPEHRFRRPDGSDNNIMNP
KLGASNQPYSRNVQRTHPQQVNLPDPGTVYDLLLARDSFEPHPTGISSLLFNFANIIIHDIFSTTRQPGAHSAYNEHSSYLDLQVVYGADLEEQTRVRTGTLGLLKPDAIGDWRLAMMPP
ATAALGVLFSRNHNFIAKRLYEVNENKRFDDLEGEALDEELFGIARLVNCGHFLHIILRDYIPVILNTNDSEWYVDPLNVIKSIGGPGSLERGIGNSVAAEFSVLYRWHAAVSQNDEKWM
NEFLEAQFPGKSPDEVSPMEFVAAAAALKHDFLDTDPGEWNLHSWERDAQGKFDDALIAQVVKDTVSDVAAAFRARGHPSWFRPIEILGMITARKDWALCTMNEFRHFLGLKTYNSFSEW
NPDPKISRAAEMLYGDIDNLELYPGLMAEEAKPSIPGSGLCPGYTISRGILSDAAALTRGDRFYTNDFSTSNLTSAGYEYCTTPQPGGHGLMGKLIMANLPGQFPYNSVYALFPFRIPER
TVTMLKEKHVLEQYDTSYPAPPRRWYAIESYAASKEILEDSRYFVALPPMSYDESLMTSALHSIPRFHDEVADFYSVNTGLIMKDRSIPYSPSGRERIVDLIEVVNTVSAQFTAKLFALP
TPGSHGLHLGMSPEELSTTLAKPLAYAMYGSFDFQGHQTWNLEEESEACTRRLKKLIWARIHTVDGILSPVFSIVQGISNVVGGPRNIAANEMAKHFYHTLFASGKSNDELVKDCLHMMV
SLTATHALVLVQTFKWFLEEENAEHLSAMYTLAQKNDPASNAELRNRLMEAYRLSSITPPQAKFALQSVALPDVDDGKVHVQVGDGVYISPSALYRDPQLSSDPERFAPSSKKPVRLGLG
DAPTQSLLEVALPAMAKQFFKHSNLRMAASGPPPVVNDAGPTANEKLPYFVSNHGAEYPLPIDTAMHVIYEAR*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 13, 1 intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACGATGACCACTGAGACGATGGAGCAGAGGTACGTCTGGACGAAACCCTTCCTCTCCTGTTCTTTCAGCCTCCTCATTGCTGTTGTCTGACCACATATCCTTCTTGCTTTCCAT
CTTCGACCCGCTCTTTCGCTTCTCTCAGGTCAAGACCTTTGTCAAGGACAAGGTGAACCAGACCACCGATGCTGCCGGTCTCTCCGCCACCGAGACGCGCAAAAAGGCACAGGCCGCGGT
GAAGCAGGCAAAGCAAAAGACGTCGGCGGCCACCACCACCTCGATCGAGTCGCTGCAGATGCTGCTGGACCAGCTCAACCGCAGCCGAATCGTCAACGATGTCAAGCTGCTCGGTCAAGC
ACCCAACCTGCTCATCACGGGCCTCACGGGCGGAGGCTTGGACGATCGCAAGCTTTTGCTCGAGCAGCTCATCACGCTGCTCGCCAGCATGCCCGTCACGTCCAACATCAGCCGTACGCT
CTCCGACGCCCTGATCGGCATCATCTGGGGTGATCTTCCGCATCCTGCCGTCTCGTTCCTGGGTCCCGAGCACCGCTTCCGACGCCCCGATGGCTCGGACAACAATATCATGAACCCCAA
GCTCGGTGCCTCGAACCAGCCCTACTCTCGCAACGTGCAGCGCACGCATCCACAGCAGGTCAACCTTCCCGACCCGGGCACGGTCTACGACCTGTTGCTTGCGCGAGACAGCTTCGAGCC
GCACCCTACCGGCATCAGCTCGCTGCTTTTCAACTTTGCCAACATCATCATCCACGACATCTTCTCCACCACGCGTCAGCCCGGCGCCCACTCTGCCTACAACGAGCATTCGTCGTACCT
CGATCTGCAGGTCGTCTACGGCGCCGACCTCGAAGAGCAGACGCGCGTGCGAACGGGCACGCTCGGTCTGCTGAAGCCCGACGCCATCGGCGACTGGCGTCTGGCCATGATGCCGCCCGC
GACGGCTGCGCTCGGCGTGCTCTTCAGCCGCAACCACAACTTCATCGCCAAGCGTCTGTACGAGGTCAACGAGAACAAGCGCTTCGACGACCTCGAGGGCGAGGCGCTCGACGAGGAGCT
CTTTGGCATTGCGCGTCTCGTCAACTGCGGTCACTTCTTGCACATCATCCTGCGCGACTACATCCCCGTCATCCTCAACACGAACGACTCGGAGTGGTACGTCGACCCTCTGAACGTGAT
CAAGAGCATCGGCGGTCCCGGAAGCCTCGAGCGTGGCATTGGCAACTCGGTCGCGGCCGAGTTCTCGGTGCTCTACCGTTGGCACGCAGCCGTGTCGCAGAACGACGAAAAGTGGATGAA
CGAGTTCCTCGAGGCCCAGTTTCCAGGCAAGAGCCCCGACGAGGTCTCTCCCATGGAGTTTGTCGCAGCAGCAGCAGCGCTCAAGCACGACTTCCTCGACACGGATCCAGGCGAGTGGAA
CCTCCACAGCTGGGAGAGAGATGCGCAGGGCAAGTTTGACGACGCGCTGATTGCCCAGGTCGTCAAGGATACCGTCTCGGACGTGGCTGCCGCCTTCCGCGCCCGCGGCCACCCGAGCTG
GTTCCGCCCCATCGAGATCCTCGGCATGATCACGGCCCGCAAGGACTGGGCGCTCTGCACCATGAACGAGTTCCGCCACTTCCTCGGCCTCAAGACGTACAACTCGTTCAGCGAGTGGAA
CCCCGATCCCAAGATCTCCAGGGCAGCCGAGATGCTCTACGGCGACATTGACAACCTCGAGCTCTACCCGGGCCTCATGGCCGAAGAGGCCAAGCCCAGCATCCCCGGCAGCGGTCTCTG
CCCCGGCTACACGATCTCGCGCGGTATCCTCAGCGACGCGGCCGCGCTCACCCGAGGCGACCGCTTCTACACCAACGACTTCTCCACGTCGAACCTGACGAGCGCCGGCTACGAATACTG
CACCACACCGCAGCCCGGCGGACACGGTCTGATGGGCAAGCTCATCATGGCCAACCTGCCCGGACAGTTCCCCTACAACTCGGTCTACGCGCTGTTCCCCTTCCGCATTCCCGAGAGGAC
GGTCACCATGCTCAAGGAGAAGCACGTGCTCGAGCAGTATGACACGTCTTATCCGGCGCCTCCCCGTCGCTGGTATGCGATCGAGTCGTACGCGGCTAGCAAGGAGATCCTCGAGGACAG
CCGCTACTTTGTCGCGCTGCCGCCCATGTCGTACGACGAGAGCCTCATGACCTCTGCGCTCCACTCGATTCCGCGCTTCCACGACGAGGTGGCCGACTTCTACAGCGTCAACACCGGCTT
GATCATGAAGGACCGAAGCATCCCTTACTCGCCTTCGGGTCGCGAGAGGATCGTGGATCTCATCGAGGTGGTCAACACGGTCTCGGCTCAGTTCACGGCCAAGCTCTTTGCGCTGCCCAC
ACCCGGCAGTCACGGCCTTCACCTCGGTATGTCGCCCGAAGAGCTGTCCACGACGCTCGCCAAGCCGCTCGCCTACGCCATGTACGGCTCGTTTGACTTCCAGGGTCACCAGACGTGGAA
CCTCGAGGAGGAGTCCGAGGCATGCACGCGTCGTCTCAAGAAACTCATCTGGGCTCGCATCCATACGGTCGACGGCATCTTGTCGCCCGTCTTTTCGATTGTGCAGGGCATCTCGAACGT
CGTTGGCGGACCGCGCAACATTGCTGCCAACGAGATGGCCAAGCACTTCTACCACACGCTGTTTGCCTCGGGCAAGAGCAACGACGAGCTCGTTAAGGACTGCCTGCACATGATGGTGTC
TCTCACGGCGACCCACGCGCTGGTGCTGGTGCAGACGTTCAAGTGGTTCCTGGAAGAGGAGAATGCTGAGCACCTCTCTGCCATGTACACGCTGGCGCAGAAGAACGACCCTGCCTCGAA
CGCCGAGCTGCGCAACCGCCTCATGGAGGCCTACCGTCTCAGCAGCATCACGCCGCCGCAAGCCAAGTTTGCGCTCCAGTCGGTGGCCCTGCCCGACGTCGACGACGGCAAAGTGCACGT
GCAGGTGGGCGACGGCGTCTACATCTCGCCCTCGGCTCTGTACCGCGATCCACAGCTCTCGAGCGATCCCGAGCGCTTCGCTCCCAGCAGCAAGAAGCCTGTCCGCCTCGGTCTCGGCGA
TGCCCCTACTCAGTCGCTCCTCGAGGTGGCTCTTCCGGCCATGGCCAAGCAGTTTTTCAAGCATTCGAACCTTCGCATGGCTGCTTCTGGCCCTCCTCCTGTGGTCAACGACGCTGGTCC
CACGGCCAACGAGAAGCTGCCCTACTTTGTCAGCAACCACGGAGCCGAGTATCCGCTTCCGATCGACACGGCGATGCACGTCATCTACGAGGCTCGTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACGATGACCACTGAGACGATGGAGCAGGTCAAGACCTTTGTCAAGGACAAGGTGAACCAGACCACCGATGCTGCCGGTCTCTCCGCCACCGAGACGCGCAAAAAGGCACAGGCC
GCGGTGAAGCAGGCAAAGCAAAAGACGTCGGCGGCCACCACCACCTCGATCGAGTCGCTGCAGATGCTGCTGGACCAGCTCAACCGCAGCCGAATCGTCAACGATGTCAAGCTGCTCGGT
CAAGCACCCAACCTGCTCATCACGGGCCTCACGGGCGGAGGCTTGGACGATCGCAAGCTTTTGCTCGAGCAGCTCATCACGCTGCTCGCCAGCATGCCCGTCACGTCCAACATCAGCCGT
ACGCTCTCCGACGCCCTGATCGGCATCATCTGGGGTGATCTTCCGCATCCTGCCGTCTCGTTCCTGGGTCCCGAGCACCGCTTCCGACGCCCCGATGGCTCGGACAACAATATCATGAAC
CCCAAGCTCGGTGCCTCGAACCAGCCCTACTCTCGCAACGTGCAGCGCACGCATCCACAGCAGGTCAACCTTCCCGACCCGGGCACGGTCTACGACCTGTTGCTTGCGCGAGACAGCTTC
GAGCCGCACCCTACCGGCATCAGCTCGCTGCTTTTCAACTTTGCCAACATCATCATCCACGACATCTTCTCCACCACGCGTCAGCCCGGCGCCCACTCTGCCTACAACGAGCATTCGTCG
TACCTCGATCTGCAGGTCGTCTACGGCGCCGACCTCGAAGAGCAGACGCGCGTGCGAACGGGCACGCTCGGTCTGCTGAAGCCCGACGCCATCGGCGACTGGCGTCTGGCCATGATGCCG
CCCGCGACGGCTGCGCTCGGCGTGCTCTTCAGCCGCAACCACAACTTCATCGCCAAGCGTCTGTACGAGGTCAACGAGAACAAGCGCTTCGACGACCTCGAGGGCGAGGCGCTCGACGAG
GAGCTCTTTGGCATTGCGCGTCTCGTCAACTGCGGTCACTTCTTGCACATCATCCTGCGCGACTACATCCCCGTCATCCTCAACACGAACGACTCGGAGTGGTACGTCGACCCTCTGAAC
GTGATCAAGAGCATCGGCGGTCCCGGAAGCCTCGAGCGTGGCATTGGCAACTCGGTCGCGGCCGAGTTCTCGGTGCTCTACCGTTGGCACGCAGCCGTGTCGCAGAACGACGAAAAGTGG
ATGAACGAGTTCCTCGAGGCCCAGTTTCCAGGCAAGAGCCCCGACGAGGTCTCTCCCATGGAGTTTGTCGCAGCAGCAGCAGCGCTCAAGCACGACTTCCTCGACACGGATCCAGGCGAG
TGGAACCTCCACAGCTGGGAGAGAGATGCGCAGGGCAAGTTTGACGACGCGCTGATTGCCCAGGTCGTCAAGGATACCGTCTCGGACGTGGCTGCCGCCTTCCGCGCCCGCGGCCACCCG
AGCTGGTTCCGCCCCATCGAGATCCTCGGCATGATCACGGCCCGCAAGGACTGGGCGCTCTGCACCATGAACGAGTTCCGCCACTTCCTCGGCCTCAAGACGTACAACTCGTTCAGCGAG
TGGAACCCCGATCCCAAGATCTCCAGGGCAGCCGAGATGCTCTACGGCGACATTGACAACCTCGAGCTCTACCCGGGCCTCATGGCCGAAGAGGCCAAGCCCAGCATCCCCGGCAGCGGT
CTCTGCCCCGGCTACACGATCTCGCGCGGTATCCTCAGCGACGCGGCCGCGCTCACCCGAGGCGACCGCTTCTACACCAACGACTTCTCCACGTCGAACCTGACGAGCGCCGGCTACGAA
TACTGCACCACACCGCAGCCCGGCGGACACGGTCTGATGGGCAAGCTCATCATGGCCAACCTGCCCGGACAGTTCCCCTACAACTCGGTCTACGCGCTGTTCCCCTTCCGCATTCCCGAG
AGGACGGTCACCATGCTCAAGGAGAAGCACGTGCTCGAGCAGTATGACACGTCTTATCCGGCGCCTCCCCGTCGCTGGTATGCGATCGAGTCGTACGCGGCTAGCAAGGAGATCCTCGAG
GACAGCCGCTACTTTGTCGCGCTGCCGCCCATGTCGTACGACGAGAGCCTCATGACCTCTGCGCTCCACTCGATTCCGCGCTTCCACGACGAGGTGGCCGACTTCTACAGCGTCAACACC
GGCTTGATCATGAAGGACCGAAGCATCCCTTACTCGCCTTCGGGTCGCGAGAGGATCGTGGATCTCATCGAGGTGGTCAACACGGTCTCGGCTCAGTTCACGGCCAAGCTCTTTGCGCTG
CCCACACCCGGCAGTCACGGCCTTCACCTCGGTATGTCGCCCGAAGAGCTGTCCACGACGCTCGCCAAGCCGCTCGCCTACGCCATGTACGGCTCGTTTGACTTCCAGGGTCACCAGACG
TGGAACCTCGAGGAGGAGTCCGAGGCATGCACGCGTCGTCTCAAGAAACTCATCTGGGCTCGCATCCATACGGTCGACGGCATCTTGTCGCCCGTCTTTTCGATTGTGCAGGGCATCTCG
AACGTCGTTGGCGGACCGCGCAACATTGCTGCCAACGAGATGGCCAAGCACTTCTACCACACGCTGTTTGCCTCGGGCAAGAGCAACGACGAGCTCGTTAAGGACTGCCTGCACATGATG
GTGTCTCTCACGGCGACCCACGCGCTGGTGCTGGTGCAGACGTTCAAGTGGTTCCTGGAAGAGGAGAATGCTGAGCACCTCTCTGCCATGTACACGCTGGCGCAGAAGAACGACCCTGCC
TCGAACGCCGAGCTGCGCAACCGCCTCATGGAGGCCTACCGTCTCAGCAGCATCACGCCGCCGCAAGCCAAGTTTGCGCTCCAGTCGGTGGCCCTGCCCGACGTCGACGACGGCAAAGTG
CACGTGCAGGTGGGCGACGGCGTCTACATCTCGCCCTCGGCTCTGTACCGCGATCCACAGCTCTCGAGCGATCCCGAGCGCTTCGCTCCCAGCAGCAAGAAGCCTGTCCGCCTCGGTCTC
GGCGATGCCCCTACTCAGTCGCTCCTCGAGGTGGCTCTTCCGGCCATGGCCAAGCAGTTTTTCAAGCATTCGAACCTTCGCATGGCTGCTTCTGGCCCTCCTCCTGTGGTCAACGACGCT
GGTCCCACGGCCAACGAGAAGCTGCCCTACTTTGTCAGCAACCACGGAGCCGAGTATCCGCTTCCGATCGACACGGCGATGCACGTCATCTACGAGGCTCGTTGA

Retrieve as FASTA