Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
641 |
PWM (Da): |
72632.85 |
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PI (pH):
| 6.8 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MISLKPIFKSVYIRLWKFVNIFVHWHKLPTWLGVFNLLALRYELREKNLHDTYPNAEFQGTTADCPMKNSKFIANRNSDGDFNDLAQPKMGCAGMRFGRNVPRKYTTPPTQQELLTPNPRIISEKILARPEGQFKPAEIVNLLAAAWIQFQVHDWAQHFLVTNGDKDVEIPLDKADRWSERIMKIPRTKKDDALSQQDIETPAYTNECTHWWDASQIYGSTEAETKALRAQCDKSYPGQLHVTREDGVQFLPRSDDGIPKTGFRQNWWLGLELLHTLFALEHNAIATQLHLSNPSWSSDQIFDTARLINCALMAKIHTVEWTPGILQHPALQIGMNANWWGLLGDKLWHVFGRVFDNKSEVISGIPGSGVDHDNVPYCLTEEFVSVYRLHPLIPDNVAFFSIKDGQHKGTLPIKDVAFESARKPFDEDKSGLGLSFADVFYSFGVNYPGAIRAHNMPNFLRDLNIPGDKDFPQGRHLDLGTIDILRDRERGVPRYNAFRRLFHMAPAKSFLDLTGGDAKLAAELEDVYDGDLEAVDLLVGTLSEPLPKGFGFSDTAFRVFILMATRRIKSDRFLAGDGWCPEVYTREGINWVQNNTMKDVLCRHFPELAATLHNVKNAFAPWTKIGQTEAYAGPETNKAKN* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (2 introns). Incorrect prediction from JGI (one extra intron). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATCTCCCTCAAACCCATCTTCAAGTCCGTTTACATTCGTCTTTGGAAATTCGTCAACATCTTTGTCCACTGGCACAAGCTCCCCACATGGCTGGGCGTTTTCAATCTCCTCGCTCTT CGATATGAACTCCGCGAGAAGAACCTTCACGACACCTACCCCAATGCTGAGTTCCAGGGCACTACAGCAGATTGCCCCATGAAGAACTCAAAGTTCATCGCGAATAGGAACTCAGATGGC GATTTCAATGATCTGGCGCAACCAAAGATGGGGTGCGCTGGTATGAGATTTGGTCGAAATGTCCCGAGAAAATATACCACGCCGCCAACTCAGCAGGAGCTGCTTACGCCCAATCCAAGA ATCATATCAGAAAAGATTCTTGCTAGACCTGAAGGCCAGTTCAAACCCGCCGAGATTGTCAATCTTCTCGCCGCAGCGTGGATCCAGTTCCAAGTTCATGATTGGGCTCAGCACTTCCTT GTCACAAATGGTGATAAAGACGTTGAGATTCCTCTAGATAAAGCCGACAGGTGGTCTGAGCGCATCATGAAAATCCCCCGTACCAAGAAAGACGATGCCCTTTCGCAACAAGATATCGAG ACACCTGCTTATACCAACGAGTGCACTCATTGGTGGGATGCCTCTCAGATCTATGGATCCACTGAAGCCGAGACGAAAGCTCTCAGAGCCCAGTGCGATAAATCATATCCCGGTCAACTC CATGTAACGCGCGAAGATGGCGTGCAGTTCCTCCCTCGATCGGATGATGGAATTCCCAAGACTGGATTCAGACAAAACTGGTGGTTGGGGCTTGAACTTCTTCATACCCTATTTGCGCTG GAGCATAACGCCATTGCCACGCAGCTTCATCTTTCGAACCCTAGTTGGTCGAGTGATCAGATCTTTGATACTGCGAGACTCATCAATTGTGCTCTTATGGCGAAGATTCATACTGTTGAG TGGACACCTGGTATTCTGCAGCACCCGGCGCTGCAGATTGGAATGAATGCGAACTGGTGGGGACTTTTGGGTGACAAGGTATGTCTTCTAACCCTGCTTATGATGATTGATTACTGACTG GATTTAATAGCTCTGGCATGTCTTCGGCCGTGTCTTTGACAACAAATCAGAAGTCATTTCTGGTATTCCTGGCTCGGGTGTCGATCACGACAATGTCCCATACTGCCTTACAGAAGAATT CGTCTCCGTCTACCGTCTTCATCCTCTCATTCCCGACAACGTAGCATTCTTCAGCATTAAAGATGGCCAACACAAGGGAACTTTGCCTATCAAAGACGTCGCTTTTGAGTCAGCCCGCAA GCCCTTTGACGAAGACAAATCAGGTCTTGGCCTTTCCTTCGCTGACGTCTTCTATTCGTTTGGCGTCAACTACCCAGGTGCTATTCGAGCTCATAACATGCCGAACTTCCTACGAGACTT GAATATCCCGGGTGATAAGGACTTTCCTCAAGGCCGACACTTGGATTTGGGAACAATTGACATTCTTCGTGATCGTGAGCGCGGCGTTCCTCGCTACAACGCTTTCCGACGCCTGTTTCA CATGGCACCTGCAAAGAGCTTCCTTGATCTCACTGGCGGTGATGCCAAGTTGGCTGCTGAGTTGGAAGATGTTTACGATGGAGATCTTGAGGCTGTGGATCTTCTGGTTGGTACACTCAG CGAGCCTCTGCCCAAGGGCTTTGGCTTCAGCGACACTGCCTTCCGCGTCTTTATCCTCATGGCCACCCGTCGCATCAAGTCTGATCGCTTCCTTGCCGGCGATGGTTGGTGCCCTGAGGT GTACACCCGCGAGGGCATCAATTGGGTTCAGAATAACACGATGAAGGATGTTTTGTGTCGACACTTCCCGGAACTTGCTGCAACGCTGCACAATGTCAAGAATGTGAGTATTCTTTCTAG TCACTATGATTACTCTGAAACTAACCGCAATAACAGGCTTTCGCCCCTTGGACGAAGATTGGTCAGACTGAGGCTTATGCGGGCCCAGAGACTAACAAAGCAAAGAACTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATCTCCCTCAAACCCATCTTCAAGTCCGTTTACATTCGTCTTTGGAAATTCGTCAACATCTTTGTCCACTGGCACAAGCTCCCCACATGGCTGGGCGTTTTCAATCTCCTCGCTCTT CGATATGAACTCCGCGAGAAGAACCTTCACGACACCTACCCCAATGCTGAGTTCCAGGGCACTACAGCAGATTGCCCCATGAAGAACTCAAAGTTCATCGCGAATAGGAACTCAGATGGC GATTTCAATGATCTGGCGCAACCAAAGATGGGGTGCGCTGGTATGAGATTTGGTCGAAATGTCCCGAGAAAATATACCACGCCGCCAACTCAGCAGGAGCTGCTTACGCCCAATCCAAGA ATCATATCAGAAAAGATTCTTGCTAGACCTGAAGGCCAGTTCAAACCCGCCGAGATTGTCAATCTTCTCGCCGCAGCGTGGATCCAGTTCCAAGTTCATGATTGGGCTCAGCACTTCCTT GTCACAAATGGTGATAAAGACGTTGAGATTCCTCTAGATAAAGCCGACAGGTGGTCTGAGCGCATCATGAAAATCCCCCGTACCAAGAAAGACGATGCCCTTTCGCAACAAGATATCGAG ACACCTGCTTATACCAACGAGTGCACTCATTGGTGGGATGCCTCTCAGATCTATGGATCCACTGAAGCCGAGACGAAAGCTCTCAGAGCCCAGTGCGATAAATCATATCCCGGTCAACTC CATGTAACGCGCGAAGATGGCGTGCAGTTCCTCCCTCGATCGGATGATGGAATTCCCAAGACTGGATTCAGACAAAACTGGTGGTTGGGGCTTGAACTTCTTCATACCCTATTTGCGCTG GAGCATAACGCCATTGCCACGCAGCTTCATCTTTCGAACCCTAGTTGGTCGAGTGATCAGATCTTTGATACTGCGAGACTCATCAATTGTGCTCTTATGGCGAAGATTCATACTGTTGAG TGGACACCTGGTATTCTGCAGCACCCGGCGCTGCAGATTGGAATGAATGCGAACTGGTGGGGACTTTTGGGTGACAAGCTCTGGCATGTCTTCGGCCGTGTCTTTGACAACAAATCAGAA GTCATTTCTGGTATTCCTGGCTCGGGTGTCGATCACGACAATGTCCCATACTGCCTTACAGAAGAATTCGTCTCCGTCTACCGTCTTCATCCTCTCATTCCCGACAACGTAGCATTCTTC AGCATTAAAGATGGCCAACACAAGGGAACTTTGCCTATCAAAGACGTCGCTTTTGAGTCAGCCCGCAAGCCCTTTGACGAAGACAAATCAGGTCTTGGCCTTTCCTTCGCTGACGTCTTC TATTCGTTTGGCGTCAACTACCCAGGTGCTATTCGAGCTCATAACATGCCGAACTTCCTACGAGACTTGAATATCCCGGGTGATAAGGACTTTCCTCAAGGCCGACACTTGGATTTGGGA ACAATTGACATTCTTCGTGATCGTGAGCGCGGCGTTCCTCGCTACAACGCTTTCCGACGCCTGTTTCACATGGCACCTGCAAAGAGCTTCCTTGATCTCACTGGCGGTGATGCCAAGTTG GCTGCTGAGTTGGAAGATGTTTACGATGGAGATCTTGAGGCTGTGGATCTTCTGGTTGGTACACTCAGCGAGCCTCTGCCCAAGGGCTTTGGCTTCAGCGACACTGCCTTCCGCGTCTTT ATCCTCATGGCCACCCGTCGCATCAAGTCTGATCGCTTCCTTGCCGGCGATGGTTGGTGCCCTGAGGTGTACACCCGCGAGGGCATCAATTGGGTTCAGAATAACACGATGAAGGATGTT TTGTGTCGACACTTCCCGGAACTTGCTGCAACGCTGCACAATGTCAAGAATGCTTTCGCCCCTTGGACGAAGATTGGTCAGACTGAGGCTTATGCGGGCCCAGAGACTAACAAAGCAAAG AACTGA |
Retrieve as FASTA
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