Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
641 |
| PWM (Da): |
72632.85 |
|
| PI (pH):
| 6.8 |
|
Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MISLKPIFKSVYIRLWKFVNIFVHWHKLPTWLGVFNLLALRYELREKNLHDTYPNAEFQGTTADCPMKNSKFIANRNSDGDFNDLAQPKMGCAGMRFGRNVPRKYTTPPTQQELLTPNPRIISEKILARPEGQFKPAEIVNLLAAAWIQFQVHDWAQHFLVTNGDKDVEIPLDKADRWSERIMKIPRTKKDDALSQQDIETPAYTNECTHWWDASQIYGSTEAETKALRAQCDKSYPGQLHVTREDGVQFLPRSDDGIPKTGFRQNWWLGLELLHTLFALEHNAIATQLHLSNPSWSSDQIFDTARLINCALMAKIHTVEWTPGILQHPALQIGMNANWWGLLGDKLWHVFGRVFDNKSEVISGIPGSGVDHDNVPYCLTEEFVSVYRLHPLIPDNVAFFSIKDGQHKGTLPIKDVAFESARKPFDEDKSGLGLSFADVFYSFGVNYPGAIRAHNMPNFLRDLNIPGDKDFPQGRHLDLGTIDILRDRERGVPRYNAFRRLFHMAPAKSFLDLTGGDAKLAAELEDVYDGDLEAVDLLVGTLSEPLPKGFGFSDTAFRVFILMATRRIKSDRFLAGDGWCPEVYTREGINWVQNNTMKDVLCRHFPELAATLHNVKNAFAPWTKIGQTEAYAGPETNKAKN* |
Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (2 introns). Incorrect prediction from JGI (one extra intron). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATCTCCCTCAAACCCATCTTCAAGTCCGTTTACATTCGTCTTTGGAAATTCGTCAACATCTTTGTCCACTGGCACAAGCTCCCCACATGGCTGGGCGTTTTCAATCTCCTCGCTCTT
CGATATGAACTCCGCGAGAAGAACCTTCACGACACCTACCCCAATGCTGAGTTCCAGGGCACTACAGCAGATTGCCCCATGAAGAACTCAAAGTTCATCGCGAATAGGAACTCAGATGGC
GATTTCAATGATCTGGCGCAACCAAAGATGGGGTGCGCTGGTATGAGATTTGGTCGAAATGTCCCGAGAAAATATACCACGCCGCCAACTCAGCAGGAGCTGCTTACGCCCAATCCAAGA
ATCATATCAGAAAAGATTCTTGCTAGACCTGAAGGCCAGTTCAAACCCGCCGAGATTGTCAATCTTCTCGCCGCAGCGTGGATCCAGTTCCAAGTTCATGATTGGGCTCAGCACTTCCTT
GTCACAAATGGTGATAAAGACGTTGAGATTCCTCTAGATAAAGCCGACAGGTGGTCTGAGCGCATCATGAAAATCCCCCGTACCAAGAAAGACGATGCCCTTTCGCAACAAGATATCGAG
ACACCTGCTTATACCAACGAGTGCACTCATTGGTGGGATGCCTCTCAGATCTATGGATCCACTGAAGCCGAGACGAAAGCTCTCAGAGCCCAGTGCGATAAATCATATCCCGGTCAACTC
CATGTAACGCGCGAAGATGGCGTGCAGTTCCTCCCTCGATCGGATGATGGAATTCCCAAGACTGGATTCAGACAAAACTGGTGGTTGGGGCTTGAACTTCTTCATACCCTATTTGCGCTG
GAGCATAACGCCATTGCCACGCAGCTTCATCTTTCGAACCCTAGTTGGTCGAGTGATCAGATCTTTGATACTGCGAGACTCATCAATTGTGCTCTTATGGCGAAGATTCATACTGTTGAG
TGGACACCTGGTATTCTGCAGCACCCGGCGCTGCAGATTGGAATGAATGCGAACTGGTGGGGACTTTTGGGTGACAAGGTATGTCTTCTAACCCTGCTTATGATGATTGATTACTGACTG
GATTTAATAGCTCTGGCATGTCTTCGGCCGTGTCTTTGACAACAAATCAGAAGTCATTTCTGGTATTCCTGGCTCGGGTGTCGATCACGACAATGTCCCATACTGCCTTACAGAAGAATT
CGTCTCCGTCTACCGTCTTCATCCTCTCATTCCCGACAACGTAGCATTCTTCAGCATTAAAGATGGCCAACACAAGGGAACTTTGCCTATCAAAGACGTCGCTTTTGAGTCAGCCCGCAA
GCCCTTTGACGAAGACAAATCAGGTCTTGGCCTTTCCTTCGCTGACGTCTTCTATTCGTTTGGCGTCAACTACCCAGGTGCTATTCGAGCTCATAACATGCCGAACTTCCTACGAGACTT
GAATATCCCGGGTGATAAGGACTTTCCTCAAGGCCGACACTTGGATTTGGGAACAATTGACATTCTTCGTGATCGTGAGCGCGGCGTTCCTCGCTACAACGCTTTCCGACGCCTGTTTCA
CATGGCACCTGCAAAGAGCTTCCTTGATCTCACTGGCGGTGATGCCAAGTTGGCTGCTGAGTTGGAAGATGTTTACGATGGAGATCTTGAGGCTGTGGATCTTCTGGTTGGTACACTCAG
CGAGCCTCTGCCCAAGGGCTTTGGCTTCAGCGACACTGCCTTCCGCGTCTTTATCCTCATGGCCACCCGTCGCATCAAGTCTGATCGCTTCCTTGCCGGCGATGGTTGGTGCCCTGAGGT
GTACACCCGCGAGGGCATCAATTGGGTTCAGAATAACACGATGAAGGATGTTTTGTGTCGACACTTCCCGGAACTTGCTGCAACGCTGCACAATGTCAAGAATGTGAGTATTCTTTCTAG
TCACTATGATTACTCTGAAACTAACCGCAATAACAGGCTTTCGCCCCTTGGACGAAGATTGGTCAGACTGAGGCTTATGCGGGCCCAGAGACTAACAAAGCAAAGAACTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATCTCCCTCAAACCCATCTTCAAGTCCGTTTACATTCGTCTTTGGAAATTCGTCAACATCTTTGTCCACTGGCACAAGCTCCCCACATGGCTGGGCGTTTTCAATCTCCTCGCTCTT
CGATATGAACTCCGCGAGAAGAACCTTCACGACACCTACCCCAATGCTGAGTTCCAGGGCACTACAGCAGATTGCCCCATGAAGAACTCAAAGTTCATCGCGAATAGGAACTCAGATGGC
GATTTCAATGATCTGGCGCAACCAAAGATGGGGTGCGCTGGTATGAGATTTGGTCGAAATGTCCCGAGAAAATATACCACGCCGCCAACTCAGCAGGAGCTGCTTACGCCCAATCCAAGA
ATCATATCAGAAAAGATTCTTGCTAGACCTGAAGGCCAGTTCAAACCCGCCGAGATTGTCAATCTTCTCGCCGCAGCGTGGATCCAGTTCCAAGTTCATGATTGGGCTCAGCACTTCCTT
GTCACAAATGGTGATAAAGACGTTGAGATTCCTCTAGATAAAGCCGACAGGTGGTCTGAGCGCATCATGAAAATCCCCCGTACCAAGAAAGACGATGCCCTTTCGCAACAAGATATCGAG
ACACCTGCTTATACCAACGAGTGCACTCATTGGTGGGATGCCTCTCAGATCTATGGATCCACTGAAGCCGAGACGAAAGCTCTCAGAGCCCAGTGCGATAAATCATATCCCGGTCAACTC
CATGTAACGCGCGAAGATGGCGTGCAGTTCCTCCCTCGATCGGATGATGGAATTCCCAAGACTGGATTCAGACAAAACTGGTGGTTGGGGCTTGAACTTCTTCATACCCTATTTGCGCTG
GAGCATAACGCCATTGCCACGCAGCTTCATCTTTCGAACCCTAGTTGGTCGAGTGATCAGATCTTTGATACTGCGAGACTCATCAATTGTGCTCTTATGGCGAAGATTCATACTGTTGAG
TGGACACCTGGTATTCTGCAGCACCCGGCGCTGCAGATTGGAATGAATGCGAACTGGTGGGGACTTTTGGGTGACAAGCTCTGGCATGTCTTCGGCCGTGTCTTTGACAACAAATCAGAA
GTCATTTCTGGTATTCCTGGCTCGGGTGTCGATCACGACAATGTCCCATACTGCCTTACAGAAGAATTCGTCTCCGTCTACCGTCTTCATCCTCTCATTCCCGACAACGTAGCATTCTTC
AGCATTAAAGATGGCCAACACAAGGGAACTTTGCCTATCAAAGACGTCGCTTTTGAGTCAGCCCGCAAGCCCTTTGACGAAGACAAATCAGGTCTTGGCCTTTCCTTCGCTGACGTCTTC
TATTCGTTTGGCGTCAACTACCCAGGTGCTATTCGAGCTCATAACATGCCGAACTTCCTACGAGACTTGAATATCCCGGGTGATAAGGACTTTCCTCAAGGCCGACACTTGGATTTGGGA
ACAATTGACATTCTTCGTGATCGTGAGCGCGGCGTTCCTCGCTACAACGCTTTCCGACGCCTGTTTCACATGGCACCTGCAAAGAGCTTCCTTGATCTCACTGGCGGTGATGCCAAGTTG
GCTGCTGAGTTGGAAGATGTTTACGATGGAGATCTTGAGGCTGTGGATCTTCTGGTTGGTACACTCAGCGAGCCTCTGCCCAAGGGCTTTGGCTTCAGCGACACTGCCTTCCGCGTCTTT
ATCCTCATGGCCACCCGTCGCATCAAGTCTGATCGCTTCCTTGCCGGCGATGGTTGGTGCCCTGAGGTGTACACCCGCGAGGGCATCAATTGGGTTCAGAATAACACGATGAAGGATGTT
TTGTGTCGACACTTCCCGGAACTTGCTGCAACGCTGCACAATGTCAAGAATGCTTTCGCCCCTTGGACGAAGATTGGTCAGACTGAGGCTTATGCGGGCCCAGAGACTAACAAAGCAAAG
AACTGA |
Retrieve as FASTA
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