Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
204 |
| PWM (Da): |
23488.12 |
|
| PI (pH):
| 9.49 |
|
Sequence 245
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MYRPNSPTLFSPENTISTTTSNTFSNTFSSTISNTISNYKGELLHLNYLQNKVVLIINISNIDSLASSNHHFAQLEHLYEKYSHLGFEILAFPTNQFDKETGQELGGRRKQYVSQYEIQHNQLSNEILKKIKYPVMSCCKVNGKNQLELFDWLKSQKKGVIRIRTIKMNFEKFVVDKDGHVVERFSCFTKPSKLENLIQTLLKK |
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic (1 introns). Incorrect prediction from JGI (very long prot wo intron) |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGTACAGACCAAATTCTCCAACATTGTTTTCACCCGAAAATACTATATCAACTACTACCTCAAATACATTCTCAAACACTTTTTCAAGTACAATTTCAAATACAATTTCAAGTCCTTGCA
AAAATATGAGACAAAATAGCAAAAAAAATCCAGATCTTCTAAAATCTTGGAATAAATCCAATTCAAACAACACAATCTCCTTTTCAAATTTTTCCTTTAAAAAATCAAAAAATGTTTACA
ATAATTCAGGTTCAAAAGACTCTGCCTTGATAACAACAAAATTCTCCTTATTCGATATGGAAAATAATGCTAATCTTAACAAACAAAAAAATAGCAGTCACTCAAACAACTCGATAACCA
GAAAATTGCAAGAACATTTTCAAAGTCCTAAAAATACTCCCAAAAACACCCCTCAGAATAGCCCTCAACAAATCCAACACCAATATAATACTTCAGAATATAACTACAGTAATATTAATG
GATTCTCAGATCAATACAGCGAGACTTGTACCAGTGATTATAATAGTGAATATAATAGTGACTATTTTTATAGAGATAACGATCAAATCAGCTACCAATATCAATCGCCTTATCAACTAA
ATTCCCAAAGATTTTCTCAACTTAAAGATTTTGACTATAATGAATATGATGAATACGATGAATATGATGAATATGATGAAGCCCTAAATTTGAAATCAATCCCTGAATCTCAAAGTGAAG
AAACTAATAGTGATACTTTTATATTTGTGAATGAGGATCAAATTAGCGAGTCGACACAAGATTTAATGAAAAAAGATCAGCCAGTTGGAAATTTAATGGCCAACTCACTTGATAATGATA
AGGAAGAAGATATTAAAACTGGTAGTTTTATGCAGCCTCATAACTTTTTAACAACTGTTGATTCGTCTGATATGCAATCATTAACTACTGTTATTATAGCACCTTTGCAACCAAAAAATT
TTGAGAGTTTTCTCTTCTCCAAGAATAACACACAGACTAGTCACGTAACTAATAATAATGAACATAACGATGATAATAACGATATTATTAGCGCGAATTATGAATCTAATATTTCTTCTT
CCATGTCTTCTAATGAAATAATTTTTTCAAGAAACAGCATTTCGAAATCAAGTATGAAACAAGGATCGAGCGATACAATGATATCCTCAGTGAACTCCATTTCGATATCCAATAGAAGTT
CCAATTCTAATTCAAGTAATCAACTGAGTAAGTTGAGCGCATTGAATTCCAAAAGTTCAATTAAAAGGTATATTCCAAGATCTTTGACTGCTTTGTCATATTCGAAATCTTTAAAGTCAT
TAAAATCGTATAATGTGAATAATGTTAATAACTCGACATCGACATTTCATAATTCACGAAAATCGTCAATGTCAAACATTTCTTTTATGAATTCAGAGGTGGAGTTGGTAACTAACGGTG
AAGTTAATAACGATTTAAATTCAATAGTGATGAGTCCGAAATCATCAATGAATAATAAAACTGCATCTCGTTTATCGATAAATAGTTCTATTTCTGTGCCATACAATATGAAAAATAGAA
ACAAGTCAATTTATGACTTTGTTGTTCTAGATTATAAAGGGGAACTTTTGCATTTAAACTACCTTCAAAATAAAGTTGTTCTTATTATTAATATTTCAAATATTGATAGTTTGGCATCGA
GTAACCATCATTTTGCACAGCTAGAGCATCTTTATGAAAAATACAGTCATCTTGGATTTGAGATATTAGCATTTCCAACTAATCAATTTGACAAAGAAACTGGACAGGAATTGGGTGGTA
GGCGCAAACAATATGTTAGCCAGTATGAAATCCAGCACAACCAACTCAGCAACGAGATCTTGAAAAAGATCAAGTATCCAGTTATGAGCTGTTGCAAAGTCAATGGCAAGAACCAATTGG
AATTGTTTGACTGGTTAAAGTCTCAAAAGAAGGGAGTAATACGTATCAGAACTATCAAAATGAACTTTGAAAAATTTGTTGTTGATAAAGATGGCCATGTTGTTGAAAGATTCAGCTGTT
TTACCAAACCAAGTAAATTGGAAAATCTCATCCAAACATTACTAAAAAAATAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGTACAGACCAAATTCTCCAACATTGTTTTCACCCGAAAATACTATATCAACTACTACCTCAAATACATTCTCAAACACTTTTTCAAGTACAATTTCAAATACAATTTCAAATTATAAAG
GGGAACTTTTGCATTTAAACTACCTTCAAAATAAAGTTGTTCTTATTATTAATATTTCAAATATTGATAGTTTGGCATCGAGTAACCATCATTTTGCACAGCTAGAGCATCTTTATGAAA
AATACAGTCATCTTGGATTTGAGATATTAGCATTTCCAACTAATCAATTTGACAAAGAAACTGGACAGGAATTGGGTGGTAGGCGCAAACAATATGTTAGCCAGTATGAAATCCAGCACA
ACCAACTCAGCAACGAGATCTTGAAAAAGATCAAGTATCCAGTTATGAGCTGTTGCAAAGTCAATGGCAAGAACCAATTGGAATTGTTTGACTGGTTAAAGTCTCAAAAGAAGGGAGTAA
TACGTATCAGAACTATCAAAATGAACTTTGAAAAATTTGTTGTTGATAAAGATGGCCATGTTGTTGAAAGATTCAGCTGTTTTACCAAACCAAGTAAATTGGAAAATCTCATCCAAACAT
TACTAAAAAAATAA |
Retrieve as FASTA
|
|
