Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
204 |
| PWM (Da): |
23488.12 |
|
| PI (pH):
| 9.49 |
|
Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MYRPNSPTLFSPENTISTTTSNTFSNTFSSTISNTISNYKGELLHLNYLQNKVVLIINISNIDSLASSNHHFAQLEHLYEKYSHLGFEILAFPTNQFDKETGQELGGRRKQYVSQYEIQHNQLSNEILKKIKYPVMSCCKVNGKNQLELFDWLKSQKKGVIRIRTIKMNFEKFVVDKDGHVVERFSCFTKPSKLENLIQTLLKK |
Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (1 introns). Incorrect prediction from JGI (very long prot wo intron) |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTACAGACCAAATTCTCCAACATTGTTTTCACCCGAAAATACTATATCAACTACTACCTCAAATACATTCTCAAACACTTTTTCAAGTACAATTTCAAATACAATTTCAAGTCCTTGC
AAAAATATGAGACAAAATAGCAAAAAAAATCCAGATCTTCTAAAATCTTGGAATAAATCCAATTCAAACAACACAATCTCCTTTTCAAATTTTTCCTTTAAAAAATCAAAAAATGTTTAC
AATAATTCAGGTTCAAAAGACTCTGCCTTGATAACAACAAAATTCTCCTTATTCGATATGGAAAATAATGCTAATCTTAACAAACAAAAAAATAGCAGTCACTCAAACAACTCGATAACC
AGAAAATTGCAAGAACATTTTCAAAGTCCTAAAAATACTCCCAAAAACACCCCTCAGAATAGCCCTCAACAAATCCAACACCAATATAATACTTCAGAATATAACTACAGTAATATTAAT
GGATTCTCAGATCAATACAGCGAGACTTGTACCAGTGATTATAATAGTGAATATAATAGTGACTATTTTTATAGAGATAACGATCAAATCAGCTACCAATATCAATCGCCTTATCAACTA
AATTCCCAAAGATTTTCTCAACTTAAAGATTTTGACTATAATGAATATGATGAATACGATGAATATGATGAATATGATGAAGCCCTAAATTTGAAATCAATCCCTGAATCTCAAAGTGAA
GAAACTAATAGTGATACTTTTATATTTGTGAATGAGGATCAAATTAGCGAGTCGACACAAGATTTAATGAAAAAAGATCAGCCAGTTGGAAATTTAATGGCCAACTCACTTGATAATGAT
AAGGAAGAAGATATTAAAACTGGTAGTTTTATGCAGCCTCATAACTTTTTAACAACTGTTGATTCGTCTGATATGCAATCATTAACTACTGTTATTATAGCACCTTTGCAACCAAAAAAT
TTTGAGAGTTTTCTCTTCTCCAAGAATAACACACAGACTAGTCACGTAACTAATAATAATGAACATAACGATGATAATAACGATATTATTAGCGCGAATTATGAATCTAATATTTCTTCT
TCCATGTCTTCTAATGAAATAATTTTTTCAAGAAACAGCATTTCGAAATCAAGTATGAAACAAGGATCGAGCGATACAATGATATCCTCAGTGAACTCCATTTCGATATCCAATAGAAGT
TCCAATTCTAATTCAAGTAATCAACTGAGTAAGTTGAGCGCATTGAATTCCAAAAGTTCAATTAAAAGGTATATTCCAAGATCTTTGACTGCTTTGTCATATTCGAAATCTTTAAAGTCA
TTAAAATCGTATAATGTGAATAATGTTAATAACTCGACATCGACATTTCATAATTCACGAAAATCGTCAATGTCAAACATTTCTTTTATGAATTCAGAGGTGGAGTTGGTAACTAACGGT
GAAGTTAATAACGATTTAAATTCAATAGTGATGAGTCCGAAATCATCAATGAATAATAAAACTGCATCTCGTTTATCGATAAATAGTTCTATTTCTGTGCCATACAATATGAAAAATAGA
AACAAGTCAATTTATGACTTTGTTGTTCTAGATTATAAAGGGGAACTTTTGCATTTAAACTACCTTCAAAATAAAGTTGTTCTTATTATTAATATTTCAAATATTGATAGTTTGGCATCG
AGTAACCATCATTTTGCACAGCTAGAGCATCTTTATGAAAAATACAGTCATCTTGGATTTGAGATATTAGCATTTCCAACTAATCAATTTGACAAAGAAACTGGACAGGAATTGGGTGGT
AGGCGCAAACAATATGTTAGCCAGTATGAAATCCAGCACAACCAACTCAGCAACGAGATCTTGAAAAAGATCAAGTATCCAGTTATGAGCTGTTGCAAAGTCAATGGCAAGAACCAATTG
GAATTGTTTGACTGGTTAAAGTCTCAAAAGAAGGGAGTAATACGTATCAGAACTATCAAAATGAACTTTGAAAAATTTGTTGTTGATAAAGATGGCCATGTTGTTGAAAGATTCAGCTGT
TTTACCAAACCAAGTAAATTGGAAAATCTCATCCAAACATTACTAAAAAAATAA |
Retrieve as FASTA
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|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTACAGACCAAATTCTCCAACATTGTTTTCACCCGAAAATACTATATCAACTACTACCTCAAATACATTCTCAAACACTTTTTCAAGTACAATTTCAAATACAATTTCAAATTATAAA
GGGGAACTTTTGCATTTAAACTACCTTCAAAATAAAGTTGTTCTTATTATTAATATTTCAAATATTGATAGTTTGGCATCGAGTAACCATCATTTTGCACAGCTAGAGCATCTTTATGAA
AAATACAGTCATCTTGGATTTGAGATATTAGCATTTCCAACTAATCAATTTGACAAAGAAACTGGACAGGAATTGGGTGGTAGGCGCAAACAATATGTTAGCCAGTATGAAATCCAGCAC
AACCAACTCAGCAACGAGATCTTGAAAAAGATCAAGTATCCAGTTATGAGCTGTTGCAAAGTCAATGGCAAGAACCAATTGGAATTGTTTGACTGGTTAAAGTCTCAAAAGAAGGGAGTA
ATACGTATCAGAACTATCAAAATGAACTTTGAAAAATTTGTTGTTGATAAAGATGGCCATGTTGTTGAAAGATTCAGCTGTTTTACCAAACCAAGTAAATTGGAAAATCTCATCCAAACA
TTACTAAAAAAATAA |
Retrieve as FASTA
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