RedOxiBase: View Perox 10773

Entry information : SpasCcP02

Entry ID	10773
Creation	2012-03-19 (Christophe Dunand)
Last sequence changes	2012-03-19 (Christophe Dunand)
Sequence status	partial
Reviewer	Not yet reviewed
Last annotation changes	2012-04-27 (Catherine Mathe (Scipio))

Peroxidase information: SpasCcP02

Name

SpasCcP02

Class

Cytochrome C peroxidase [Orthogroup: CcP002]*

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Spathaspora

Organism

Spathaspora passalidarum (Candida sp) [TaxId: 340170 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpasCcP02 start..stop	S start..stop
PstiCcP01	452	4e-162	3..309	3..304
DhCcP01	451	1e-159	3..309	121..427
HburCcP01	404	9e-144	46..304	1..259
CalCcP01	402	1e-142	41..298	32..289

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1150129..1151055	927
complement(join(1150129..1151055))

Literature and cross-references SpasCcP02

DNA ref.	JGI genome: scaffold_6 (1151055..1150129)

Protein sequence: SpasCcP02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	309
PWM (Da):	34706.47
PI (pH):	7.5

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

VPPKTKLSIK IPANKKLVVK LSNARSITPS VSPADTEYIN QVSQEIQRIF SCPGYDDGSL APIILRLAWH CCATYDKTNG SGGSNGATMR FVPEITDEGN TGLDIARGAL EPIKQKFPKI TYSDLWTLAG KLAIEAMGGP TITWKAGRVD CRDAKFVPQS GNLPFGDKDA HHVRSTFERM GFNDQEMVAL LGAHALGRCH KRFSGWEGKW TSNPIRFSND FYQVLLNEEW SLGTVPETGR
EQYYNQDKSL IMLNTDLELV RDSKFLMWVK AYASDESLFF HDFANAFSKL LELGIERDEN YQVMPKKNY*

Retrieve as FASTA

Remarks

Partials sequence from genomic.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GTACCTCCGA AGACTAAACT TAGTATCAAG ATCCCTGCAA ACAAAAAGTT GGTGGTGAAA TTGAGCAATG CTCGTTCCAT CACTCCCTCC GTTTCACCCG CTGACACCGA ATACATCAAT CAAGTATCGC AAGAAATTCA AAGAATATTT TCTTGTCCAG GATATGATGA TGGATCATTA GCTCCTATTA TTTTAAGATT GGCTTGGCAT TGTTGTGCCA CATATGATAA GACCAATGGA TCCGGAGGAT CCAACGGTGC TACTATGAGA TTTGTTCCAG AAATTACCGA CGAAGGTAAT ACCGGTTTAG ATATTGCTCG CGGAGCATTA GAACCAATAA AACAGAAATT TCCCAAGATT ACCTATTCTG ATTTGTGGAC ACTAGCAGGA AAATTAGCCA TTGAAGCAAT GGGAGGTCCA ACAATCACTT GGAAAGCAGG TAGAGTTGAT TGCAGAGATG CTAAGTTTGT ACCCCAAAGT GGTAACCTTC CTTTTGGTGA TAAAGATGCC CATCACGTCC GATCAACCTT TGAAAGGATG GGATTTAACG ATCAAGAAAT GGTGGCTCTT TTAGGAGCTC ATGCATTAGG TAGATGTCAC AAACGGTTTA GTGGCTGGGA GGGAAAATGG ACCTCCAACC CTATTCGCTT TTCTAATGAT TTTTATCAAG TGTTGTTAAA TGAAGAATGG AGTTTAGGCA CCGTTCCTGA AACAGGGAGA GAACAATACT ACAATCAAGA CAAATCATTA ATTATGCTAA ACACCGATTT GGAATTAGTA AGGGATTCTA AATTTTTAAT GTGGGTTAAA GCATATGCTA GTGATGAATC ATTGTTCTTC
CATGATTTTG CCAATGCGTT TAGCAAGTTA TTGGAATTAG GTATCGAGAG GGATGAAAAT TATCAGGTGA TGCCTAAGAA AAATTAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA