RedOxiBase: View Perox 10818

Entry information : PplLDS01-2

Entry ID	10818
Creation	2012-04-17 (Catherine Mathe (Scipio))
Last sequence changes	2016-02-11 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2016-02-11 (Achraf Jemmat)

Peroxidase information: PplLDS01-2

Name

PplLDS01-2

Class

Linoleate diol synthase (PGHS like) [Orthogroup: LDS001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Postia

Organism

Postia placenta [TaxId: 104341 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PplLDS01-2 start..stop	S start..stop
PplLDS01-1	2042	0	1..1004	1..1004
JargLDS01	1118	0	7..1004	5..1066
LbiLDS01	969	0	15..1004	14..1069
CcinLDS01	904	0	4..1004	1..1085

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..177	177	N° 2	242..304	63	N° 3	363..447	85	N° 4	506..778	273
N° 5	852..1007	156	N° 6	1066..1175	110	N° 7	1234..1452	219	N° 8	1517..1681	165
N° 9	1744..1826	83	N° 10	1890..1924	35	N° 11	1978..2111	134	N° 12	2173..2206	34
N° 13	2262..2305	44	N° 14	2361..2408	48	N° 15	2459..2597	139	N° 16	2653..2978	326
N° 17	3031..3210	180	N° 18	3261..3346	86	N° 19	3399..3519	121	N° 20	3571..3856	286
N° 21	3917..3921	5	N° 22	3973..4016	44	N° 23	4073..4100	28	N° 24	4150..4229	80
N° 25	4279..4387	109
join(1..177,242..304,363..447,506..778,852..1007,1066..1175,1234..1452,1517..168 1,1744..1826,1890..1924,1978..2111,2173..2206,2262..2305,2361..2408,2459..2597,2 653..2978,3031..3210,3261..3346,3399..3519,3571..3856,3917..3921,3973..4016,4073 ..4100,4150..4229,4279..4387)

Literature and cross-references PplLDS01-2

DNA ref.	JGI genome: scaffold_37 (22368..26751)

Protein sequence: PplLDS01-2

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	1009
PWM (Da):	110441.72
PI (pH):	5.97

Sequence 1601
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVNLNPVLNPLKNTIDFVAESDAPVDQDGGHPLPPLLARKITDVEQEAIRGPGFTPADLPAYINAVKTLNGPGLDDRKFLLEKVLTLMARAPDDSAFAATLQKFAIDILYKDLPHPPSGYLALPSGAPPTASPITKGVKYAYRSADGSDYNVLIPTLGMAGTPYARSVPSTTRIPPQYLPDPGLVFDTLLKREKFVEHPGGISSLFFAFADLVIHSIFNTNTRDWTINDASSYLDLSPLYGSSQAQVDSVRRKDGTGRLYEDVFADPRLLFMPPASCALLVLFCRNHYVAERILAINELGSYRAPSTLGAQERAAQDEELFQRARLVNSALFMQVILGDYVGAILGLTRDGLAWRLDPLAAMRELNHAFAPQGEGNVVAVEFNLMYRWHATSSASDTQWIENLFGKLFPGKSWSDISVNDFRTAIIKYVMGTPQDVKEWSFDNLKRGPDGRYDAELANILQSATEAPASAFGARGTPEVLRVIEILGIMQARSWGTCLNEFRSFMGLKPYSTFAEWNPDPKIKAAEALYHDIDNLELYAGLQAEETKVPMPGAGLCPGYTISRAILADAVCLTRGDRFLTVDLTPFNLTTWGYQDCQYKKDDGSIGGILSKLLFRTLPNQYPADSAYAFFPFMVPKTMKGHVAADAVNKYSWDRPALAAPVTSLLGPSVSAPVSEYDQRLKAILGGVVPDRAVRQVLFSDASIQQWAQSFQEITQQLLKTKSVDHVDSKAKYVNIVRNVVNVLPVVWISNFIVGLPLKTETNPHGVYREHDLLTKWSDVGNYVFLDQSPEGQFALRGKCTETAKDVTGFVKGHCAELSGHLSGFADSVVDYVTGGNEHERSFIKSLLAGRHGSHDALAAGVIAEVVATAPLYSRILAEVVDYYLDDGKRARLVSVLTGESANRDEKLLALIREALPGDVQKLDAARSVDFGLLDHRFLATAFTVLRTIFSLKDLKRAPGSSGSLNRFADDTNGELRPVYLTSQGSVTPWPVSMLVQVGFTH

Retrieve as FASTA

Remarks

Complete sequence from genomic (24 introns)

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTCAACCTGAACCCCGTTCTCAACCCGCTCAAGAATACCATCGACTTTGTTGCCGAGAGCGACGCCCCCGTCGACCAGGATGGCGGGCACCCCCTCCCTCCTCTACTCGCCCGCAAA
ATCACGGACGTCGAGCAGGAAGCTATCCGTGGGCCCGGCTTCACTCCCGCCGACCTGGTAAGCCACCGGTATATCGTCGGACTTATGCGCTGAATGTAGCTCACAACCTTTTGCGCCTTA
GCCTGCATATATCAACGCCGTAAAGACTCTCAATGGCCCTGGTCTTGACGACCGCAAGTTCCTGGTGAGCATCCCGGGCCTATTGAGTGTTGCTGGCAACGTCCGACGACGCGTACCTGC
AGCTCGAGAAGGTGCTCACGCTCATGGCGCGCGCCCCGGACGACTCGGCCTTCGCGGCAACGCTTCAAAAGTTCGCGATTGACATCCGTGAGCGCATATATGCGGTGAAAGTAGCGCCCA
CTGTTCTGACCGATATGCATACTAGTGTACAAGGACCTGCCTCATCCCCCGAGCGGGTACCTGGCCCTCCCCAGTGGCGCGCCCCCGACTGCATCGCCGATCACTAAGGGCGTGAAGTAC
GCCTACCGCAGCGCCGACGGCTCCGACTACAATGTCCTCATCCCTACCTTGGGCATGGCCGGCACGCCATACGCGCGCTCTGTGCCCTCCACCACGCGCATCCCCCCGCAGTATCTCCCC
GACCCGGGCCTCGTCTTCGACACGCTCCTCAAACGCGAGAAGTTTGTCGAACATCCAGGTACGTGCGCCGCCTGCGCTTCCCTCTCTTTCTTGCGTATATATATTCAGGCTCATGATGTC
ATGCCCTGCAGGCGGCATATCGAGCCTGTTCTTCGCCTTTGCCGACCTCGTCATCCACAGCATCTTCAACACCAACACGCGCGACTGGACCATCAACGACGCCTCCAGCTACCTCGACCT
CAGCCCCCTCTACGGCAGCTCCCAGGCGCAGGTCGACAGTGTTCGCCGTAAGCCCTCTCGCGCACTTCAGTGCACACCTGCTGACTGTACGCGTGACGTTCGCAGGCAAGGACGGCACTG
GTAGGCTCTACGAGGACGTCTTTGCCGACCCGCGACTGCTCTTCATGCCCCCCGCGTCGTGCGCGCTGCTCGTCCTCTTCTGCCGCAACCACAATGTAAGCCCCCAATCCGTTTGCCCCT
CGCGGCACGGGACTCACCGCGCTTGGCACGCAGTACGTCGCCGAGAGGATCCTCGCCATCAACGAGCTCGGGAGTTATCGCGCGCCCAGCACGCTCGGCGCGCAGGAGCGCGCGGCGCAG
GACGAGGAGCTCTTCCAGCGCGCCCGCCTCGTCAACAGCGCGCTCTTCATGCAGGTCATCCTGGGCGACTACGTCGGCGCGATCCTTGGCCTCACGCGCGACGGCCTCGCGTGGCGCCTC
GACCCGCTCGCGGTGCGTCTGTGTATGCGTGGGCGCGTGTGTGCATGTGCTGACGCGCGATCGGCGCCCCCCGCAGGCGATGCGCGAGCTCAACCACGCGTTCGCGCCGCAGGGCGAGGG
CAACGTCGTCGCGGTTGAGTTCAACCTGATGTACCGCTGGCATGCGACGAGCTCCGCGTCCGACACGCAGTGGATCGAGAACCTCTTTGGAAAGCTCTTCCCGGGGAAGTCGTGGAGTGA
CGTAAGCACCTTCATCGCGCGCGTGCGCGCGTGCGGGTGTCTGACCTCGGTCTTATGGGACAGATCTCCGTTAATGACTTCCGCACCGCCATCATCAAGTATGTGATGGGCACGCCGCAG
GACGTGAAGGAGTGGTCGTTTGACAAGTAAGGAAATCCGCGCTTCGTGCCGGTGTATTGTTGGATTGAAGGAAATCCCTTTATGAACAGCCTGAAGCGTGGTCCGGACGGCCGTTACGAC
GACGGTGGGTGTGCACTCTCCCACGGGCGAGCGCGTTCGCTGACGACGTGTTTGCAGCGGAGCTCGCGAACATCCTGCAGAGCGCGACCGAGGCCCCCGCGAGTGCGTTCGGGGCGCGCG
GCACGCCCGAGGTACTGCGCGTGATCGAGATCCTCGGCATCATGCAGGCTAGGAGCTGGGGGACGTGCTCGGTGCGTGCCATATCGATTCCGTCGCACCCTGCGGAAGTCTGATGCATAT
GCTATCCGCCAGTTGAACGAGTTCAGGAGCTTCATGGGCCTGAAGCGTGAGTGCCAGCAGCTGGCAAGGGTAATCGGGACAATCAGCTGACGCGTTTACAGCTTATAGCACCTTCGCGGA
GTGGAACCCCGATCCAAAGATCTACGTACGCGACCTTTTCATCACGCTCCGCTGGGTCAGATCGCTGACGCCCGCTGTAGAAGGCAGCGGAAGCCTTGTACCACGACATCGACAACCTGG
AGCTTTACGTAGGGACACTCCTTTGGGAAACGTACTTTTGACTGAGCCTTGTGTGTAGGCTGGACTGCAAGCAGAGGAGACCAAGGTGCCGATGCCAGGTGCAGGCCTGTGCCCGGGTTA
CACAATCTCGCGCGCGATCCTGGCGGATGCTGTATGCCTCACTCGTGGCGACCGCTTCCTCACTGTGGACCTCACGCGTAAGTCCGTTCCAGAAACCACCCTGCTGAACCTGGCACTCAC
GCGCCGTTCCAGCGTTCAACCTCACGACCTGGGGCTACCAGGACTGCCAGTATAAGAAGGATGACGGCTCGATCGGCGGCATCCTGTCCAAGCTGCTCTTCCGCACGCTGCCGAACCAGT
ACCCCGCCGACTCTGCGTACGCGTTCTTCCCGTTCATGGTGCCCAAGACGATGAAGGGCCACGTCGCGGCGGACGCGGTGAACAAGTACTCCTGGGACAGGCCTGCGCTGGCTGCCCCGG
TCACCTCGCTGCTGGGCCCCAGCGTGTCCGCTCCCGTCTCGGAGTATGATCAGCGTCTCAAGGCAATCTTGGGCGGCGTTGTGCCTGACCGAGCGGCGGTATGCAGCCCCTCCTGCGTTG
ATGTGGTGGTGCCTGATGGTAGCGGCATAGGTTCGGCAAGTTCTCTTCAGCGACGCGTCCATCCAGCAATGGGCACAGTCCTTCCAGGAGATCACGCAGCAGCTGCTGAAGACAAAGTCG
GTGGATCACGTTGACAGCAAGGCGAAATACGTCAACATCGTCCGCAATGTCGTCAACGTGCTTCCCGTCGTCTGGATCTCCAACTTCATCGTGCGTTCCTACGTCTCATGTATTGTCGCC
GCTGTCTCACGTAGAACTAGGTCGGGCTCCCTCTGAAGACGGAGACAAACCCCCACGGCGTATACCGTGAACATGACCTCCTGACAAAGTGGTCAGACGTTGGAAAGTTTGTATCGTTGT
ATGCGTCTGTTGATGATAACCTGATTGCGTGACATCAGCTATGTTTTCCTGGATCAATCTCCCGAAGGCCAGTTTGCGCTTCGCGGAAAGTGTACCGAGACCGCCAAGGACGTCACCGGT
TTCGTTAAAGGTCATTGTGCCGAGCTTTCCGGCCACAGCGTACGTTCCGCGCGCTCTGAACTCGTGTTCAACACTAACGAATATGTGCAGCTGTCTGGATTCGCAGATTCTGTCGTCGAC
TACGTCACAGGAGGGAATGAGCACGAGAGATCATTTATTAAGTCGCTGCTTGCTGGGCGACACGGCTCGCATGATGCCCTCGCTGCGGGTGTGATCGCCGAAGTGGTCGCTACCGCACCA
CTCTACTCCCGAATCCTGGCTGAAGTCGTTGATTACTACCTCGATGATGGCAAACGCGCTCGTCTCGTCTCAGTCCTAACTGGCGAGTCAGCGAACCGCGACGAGAAACTACTCGCGCTC
ATCCGAGAGGCTCTCCGTAAGTGCTCTTTGAGCTTGTTATACCATCGCCCTTACTGAATTATGTTGGACATTGTAGCTACCGTATGTGTAAACGTTTGTCAGACACGATGCTGCATTACT
CATTCGTTACAGGGGGATGTGCAGAAGCTCGACGCTGCTAGATCAGTGGATTTCGGGTATGCTACACTCTACATTAGCTTATATTACCATTGCTCACTCAATTTTCCACTAGTCTGCTTG
ATCACAGGTTCCTCGCAAAGGTAAGGCAGCCGCAACTAATCACTCAGCTTATATTGACCTCGTCACCAGACGGCTTTCACGGTATTGCGAACAATCTTCTCCCTTAAGGATCTCAAGCGG
GCACCTGGTTCCTCGGGTAGTCTGAACCGGTAAGTTATTTGTGATCGAAATTGGGTGTGTATGTTCATGCCGTCGCAGATTCGCGGACGACACGAACGGCGAGTTGCGTCCCGTCTACCT
GACCTCCCAGGGATCGGTGACACCATGGCCAGTGTCAATGCTAGTTCAAGTAGGTTTCACCCATTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA