Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
298 (254) |
| PWM (Da): |
29881.83 (27436.7) |
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| PI (pH):
| 6.75 (5.27) |
Peptide Signal:
| cut: 22 range:22-275 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
LKWHYYRNSC RDAETYVRHQ VEYYWKPDKS LTPKLLRLLA TCVKQGCDAS ILLDGRNSEK TAPQNSGLEG YGTVVIDKIK QVLEQRCPGV VSCADILNLx xxxxAGAPSY PVLTGRRDGM
SSSKASVDLP SPSISWEEAL AYFESRNLDV LDLATLLGxx xxxxxxxxxx xxxxxxxxxx GKPDPDMDPS YLAQMRKQCP PNSKSQGDPQ VFLDPASGSS YTFSNSYYSR LLNHQATLGI
DQQLARGDDT SQIAQEYDAG LEDFRKEFAL SMARMGNIKV LTGNQGEIRK NCRAVNSK
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. 5' and PS are missing due to NNNN. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTGAAGTGGC ACTACTACCG GAACTCGTGC CGCGATGCTG AGACGTATGT GAGGCACCAG GTCGAGTACT ACTGGAAGCC GGACAAGAGC CTCACTCCCA AGCTCCTCCG ACTGCnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnTTT GGCTACCTGT GTAAAACAGG GCTGTGATGC GTCTATTCTG TTGGACGGGC GAAATTCAGA
GAAAACAGCG CCACAAAATT CAGGGCTTGA AGGGTATGGT ACGGTGGTGA TAGACAAGAT CAAGCAAGTC CTGGAACAAC GTTGTCCTGG AGTTGTGTCT TGTGCTGACA TTCTCAACCT
TGnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnTCACT GCCCTACCGA TCATTGAAAT GCTGCTAGCT TGAACTTGTA
GTATTAGATG TGAAAAACCA GAATCGCTGA CACGATAATG TTTTTCTCAC AGGCGGGAGC GCCATCTTAC CCCGTCCTGA CGGGGAGGAG AGACGGGATG TCGTCGTCCA AGGCGTCGGT
GGACCTCCCG TCGCCATCCA TCTCGTGGGA AGAGGCGCTC GCTTACTTCG AATCGAGGAA CTTGGATGTG CTAGACCTTG CCACTCTACT TGGTAAGATG GATCATTGTA TAGAAAAGTA
AATAATTGAT TTGGACCTCA TCAAGTCATC GCTTTTTGAA ACATTnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnCTGGCA AGCCAGACCC AGATATGGAC CCATCCTACC TGGCCCAAAT GAGGAAGCAA TGCCCACCAA ACTCAAAGAG CCAAGGTGAC
CCTCAGGTGT TCCTTGACCC CGCCTCAGGC TCCAGCTACA CATTCAGCAA CTCCTACTAC TCCAGGCTCC TGAACCACCA GGCCACCCTT GGCATCGACC AGCAGCTCGC CCGCGGTGAC
GACACTTCCC AGATCGCTCA GGAGTATGAT GCTGGGCTGG AGGACTTCCG GAAGGAGTTC GCTCTGTCAA TGGCCCGGAT GGGGAACATC AAGGTCTTGA CGGGGAATCA GGGGGAGATC
CGCAAGAATT GCAGAGCCGT GAACAGCAAA TAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTGAAGTGGC ACTACTACCG GAACTCGTGC CGCGATGCTG AGACGTATGT GAGGCACCAG GTCGAGTACT ACTGGAAGCC GGACAAGAGC CTCACTCCCA AGCTCCTCCG ACTTTTGGCT
ACCTGTGTAA AACAGGGCTG TGATGCGTCT ATTCTGTTGG ACGGGCGAAA TTCAGAGAAA ACAGCGCCAC AAAATTCAGG GCTTGAAGGG TATGGTACGG TGGTGATAGA CAAGATCAAG
CAAGTCCTGG AACAACGTTG TCCTGGAGTT GTGTCTTGTG CTGACATTCT CAACCTTGnn nnnnnnnnnn nnGCGGGAGC GCCATCTTAC CCCGTCCTGA CGGGGAGGAG AGACGGGATG
TCGTCGTCCA AGGCGTCGGT GGACCTCCCG TCGCCATCCA TCTCGTGGGA AGAGGCGCTC GCTTACTTCG AATCGAGGAA CTTGGATGTG CTAGACCTTG CCACTCTACT TGGTGGCAAG
CCAGACCCAG ATATGGACCC ATCCTACCTG GCCCAAATGA GGAAGCAATG CCCACCAAAC TCAAAGAGCC AAGGTGACCC TCAGGTGTTC CTTGACCCCG CCTCAGGCTC CAGCTACACA
TTCAGCAACT CCTACTACTC CAGGCTCCTG AACCACCAGG CCACCCTTGG CATCGACCAG CAGCTCGCCC GCGGTGACGA CACTTCCCAG ATCGCTCAGG AGTATGATGC TGGGCTGGAG
GACTTCCGGA AGGAGTTCGC TCTGTCAATG GCCCGGATGG GGAACATCAA GGTCTTGACG GGGAATCAGG GGGAGATCCG CAAGAATTGC AGAGCCGTGA ACAGCAAATA A
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Retrieve as FASTA
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