Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
304 (285) |
| PWM (Da): |
33426.92 (31389.8) |
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| PI (pH): |
5.78 (5.39) |
Peptide Signal: |
cut: 20 range:20-304 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTPSRLWQLL LAALAVVSSC *VxxNANAAA TMEPPQKLQW LYYQNSCPDA EKYVRDQVEF YSKQDRTLAL KFIRLLYSDC FVTLLRIKLG CNxSILLDGP IQNAALLGLP MEMIDKVKEV
LEQHCPGDVS CDIINLAAKD AVVLVGGTSY PIPTGRRDEN SSSAKLVDLL PLQAVPWKAE PSYFKSKGLN VLVTSCSFIP DRLYDFNKTG EPDPSMDPTF LLNPDLGSSY SFGNSFYSRV
RHHQAVLGIN QQIASNFDSS LIAWEYDVRF GDFQKMFGMS TIRMGNIKLL PEDQG*IRKN C*VVDGK
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. PS are missing due to NNNN. Stops in frame. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACACCAT CAAGATTGTG GCAGTTGTTG CTAGCGGCGC TCGCGGTGGT GAGCTCATGC TAGGTGCAnn ACAATGCCAA CGCGGCAGCG ACAATGGAAC CGCCGCAGAA GCTGCAGTGG
CTTTACTACC AGAACTCATG CCCTGACGCT GAGAAGTACG TGAGGGACCA GGTCGAGTTC TACTCGAAGC AGGACAGGAC CCTTGCTCTC AAGTTCATCC GACTGCTCTA CTCCGACTGC
TTCGTCACCn nnnnnnnnnn nnnnnTTTTT TCCCCTCTCT TGGACGATCT TGAAATCTGT ATCACTTCAA TATCAAGTTT CCATCACCTT TCTATGCACG TCATATCCTA ACGGTTTAAA
CCTGTCGAAC TGGGCTTTCT AACGCTTGCT CAAAAnnnnA AAAGAAAAAG AACTGGGCTT TCTAACGTAC CACTCTTTTG CGTATAAAAC TCGGGTGCAA TGMGTCAATT CTATTGGACG
GGCCTATTCA GAATGCAGCG CTTCTAGGGC TTCCTATGGA GATGATTGAC AAGGTCAAGG AAGTCCTGGA ACAGCATTGT CCCGGGGACG TCTCTTGCAY GACATAATCA ACCTCGCTGC
TAAAGATGCT GTTGTCTTGG TATGCAACAT GGTTCGCAGT TTTTCCCTTT TGGGCTTGAA AAAAGATCGT TTAGGCTGCT CCACTAATAA TTGACATTGT GCGTTTGGTT CAGCATTTTC
AAGGGGCTTT CAGCCCTGAA AGCCTCTTGG GGAAATGCTA GACCGTTTGG TTCAATTTTT TTGCTAGCTT TCAACTTTCA ACTTACCTTC AAAATGTTAA AGGCCCAAAG CTAGTAGAGA
CTAGCTTTTG GGCTTTTAGC ATTAAGCGGA ATGTTAAAAT TATTTTTTAT CTTCCAAAAC TACTCTCACT AATTTTTCAT ATTTTCGATT TTGTnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnTGGTTT GACGAAGGGT TTAGTTTAAT TTTCAAAAAT AAAAATAAAA GTATATATAA TTATATACCC ATCAAAGCTC ATTGGGAAAG TTTTCTTTAC CAAACGCACA TTCAACTCAA
AGACCATTTG CAAAAAAAAT TTACCAAACA CAATTGCATT TCTCCAAGTA AATTTGGGCT TTCAGCATTT ACATTGAACT CAAAACCTAT TGCAAATGCT GAACCAAACG nnnnnnnnnn
nnACTTGAGT TTTAGAGCGT TTGATATGGA GAAAAATTAG AATTACTAAT GCAATAATGA TGTTGTAACA AGTGGGAGGG ACGTCGTACC CCATTCCAAC GGGGAGGAGG GACGAGAATT
CATCCTCCGC GAAGTTGGTG GACCTCCCAT TTATGCCCTG TTTGGTAACG GGTTAAATAG TAAAAAAATT TATTCTTTTG TTCTGGGGAG TAGTTTTGGA ACAGAATCGT GTTTAGTAAA
ATTTTTGTTn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn AAAAAGAAAA AGTTGATTCT TCTTTCCAAG AACAATTCTA GAATTAAGTT
CATATTTTCC TTTTTATTTT CTTTTTCTTT GTTCTTCTTC CATTTTCTTC TTCTTCATCT ATTGCCACCG CCGCCAnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnAG CTAACGCCCA TTAGGGTACC TAGGGTGGTG CTCTAGTCAT GGAAGAAAGA ACCTGTGGGC
TTCCCCTGCC ATTCnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nGAATAGGAA AGAAAAAAAA GAAGGAAAAA
GTAAAAAAGT AATAACATTA TTTAAAAATT AAAAGAAAAT GATTTGGAGT AGGAATTTTG AGTACAGTAC CAAACACAAT TTTATTTCGG GAATTGAAAT TTTGGACAGT TACCAAACAA
CTTAAAATAC TTAAAAAnnn nnnnnnnnnn CAGAATAAAA GAGAATCAAT TCTGATAAGA AATTGTTTCT GAGAACAGAA GCATTACCAA ACGCACCCTT AGAGTGGGTC TTAGACCTAT
ATATGACCCA TTTAAATTAT AAATTGGTCA TATATGGATC ACTTATTTTT TGAAGAAACT AGTTAAATGG ATTTAAAAAT TAAAGACTTA AGATAAATTG GTTTTAATTT TTAAATGGGT
CTTAAACGGG TTGGACTTAG AACCCATTTT CAACCAAAAC CTCACAATCT CCATCTTCCC TCTTTAACTT TATGAAATTA TTTTTAAACA AAGATCAAAA TTATAATTAT TTTTTATATT
TTAATTTTCT TTTTTCTTTC CTTCTTCCTC TTTCTTTAGC TGATGGCCAG CATGGCAATT GGCCAAGnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnAAG GCTTGCCTGT GGCTGGTAGC CAGCTGTCGT CATGGTCGAT GACCGGCCAT AGAAGAAGAA
AAACAAAAAA CAAAAAACAA AAGGAAAATT AAAAATTATA TTCTTAAAAA ATATAAAAAT TGTCCATTAA ATTTATATTG GATAAAATTA TTTTAGCAAT RCCATTTAAA AAAATGATAA
GAAATAATTT TTCTTAAGTT TAGTTAAATG GGTCAGATAT GGGTTAGGTC GGGnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnC ACCAATTTAA CGGATCTACT TCCATTGCAG GCCGTCCCGT GGAAAGCGGA GCCCAGTTAC TTCAAATCAA AGGGTTTGAA TGTGCTAGTC Cnnnnnnnnn
nnnnnGGTGT CATTTGACCC TCACAAATTT GACCGGGACC TCATTATATC ACCTTAGATC TTAACCAATC CAGGCAAATC GTTTAGTTTA GYGGATCGCA ACGTCTTTTT TTGCTTTTAA
GTTTTGTAAG TCRCTRCCTA ATTGTCACGA TACAAAGAAT TTTATCAGAT ATAGTATTGT CGAGGATATA ATCTGAGCCC CAATACTCAC TATGATCTCC TCCCAGTGCA CAAAATGGCA
ATGCTCACGT ATTATGTCAA TCTCAGAATC ATAGCCAAAA TCCTAACTTG CCGAAnnnnn nnnnnnnnnn nnACCAGTTG CAGCTTCATC CCGGACAGGT TGTACGATTT CAACAAAACT
GGCGAGCCAG ACCCAAGCAT GGACCCAACC TTCTTGnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnACCTCAAC CCTGACTTAG GCTCGAGCTA CAGCTTCGGC
AATTCCTTCT ACTCAAGGGT ACGGCACCAC CAGGCGGTCC TCGGCATCAA CCAGCAGATC GCTAGCAACT TCGACAGCTC CCTGATCGCT TGGGAGTATG ATGTCAGATT CGGGGACTTC
CAGAAGATGT TCGGCATGTC AACAATCCGG ATGGGGAACA TCAAGCTCCT ACCGGAGGAT CAGGGGTAGA TTCGCAAGAA TTGCTGAGTC GTGGACGGGA AATAA
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Retrieve as FASTA
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