Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
226 |
PWM (Da): |
25328.38 |
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PI (pH):
| 8.55 |
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Sequence 267
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AAVGIQPPEKLQWHYYQNSCRDAERYVRNQVEFYWKLDRSLAPKLIRMxYSDCFVTGCDASILLDGPYSEKTAPQNAGLLGFPMAVIDKIKHSMGKTNCSFIADRLYNFNNTGKPDPSMDSSFLAQMRVQCPPNSKNQVYLDPDSGSSYSFSKSFYSRVLNHRAVLGIDQQIAANNDSSQIAEEYNASFEDFRKIFALSMSRMGNIKVSTGNQGEIRKNCRVVNRK |
Retrieve as FASTA
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Remarks |
Pseudogene from NGS. 5' and PS are missing due to NNNN. Stops in frame. Containing motif YSDC instead of FHDC. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCGGCAGTGGGGATCCAGCCACCGGAGAAGCTGCAGTGGCATTACTACCAGAACTCATGCCGCGACGCGGAGAGGTACGTGAGGAACCAGGTCGAGTTCTACTGGAAGCTGGACAGGAGC CTTGCTCCCAAGCTCATCCGAATGCNCTACTCCGATTGCTTTGTCACGGTACGTATCGGCTATTTTTATCCTCTTTTGAGCAATCTTTAAGTCCGCATCGTCTCAACATCGAGTTTCCAT CGCCCTTCCAGGTACATGATATCTTTTCACCCAATGGTTTATCCTCTCGAACTGGGCTTTCTTACATACCAATTGCCACTCTTTTGTGTACATATATAAAAAACAAAGCCTTGGACTCTC AGATATGTTTGGTTATGTGTATAAAACAGGGGTGTGATGCGTCAATTCTGTTGGACGGGCCATATTCAGAGAAAACGGCACCACAAAATGCAGGGCTTCTAGGGTTTCCTATGGCGGTGA TAGACAAGATCAAGCAAGTCCTGGAACAACGTTGTCCAGGAGTCGTCTCTTGTGCTGACATTCTCAACTTTGCCGCTAGAGATGCTGCTCACTTGGTATGGCACCTGGTTTGCACTTCTC TCTCTTTTGGCTTGAAAATGAGTTGTTTTCGCTGCACTGATTATTGACATGCTGTTAGCTTGAGCTTGGAGCGTTAAATTTGGAAAATTAGAATCACTGATGCGATACTATGTTGTAATA GGCAGGAGGGCCATCGTACCCCGTTCTGGCGGGGAGGAAGGATGGGATGTCGTCCTCCGCAGCGTTGGTGGACCTACCGTTGGGGGCTGTCCCTTGGGGATCAGCTCTCGCGTACTTCGA ATCAAGGGGCTTGGATGTGCTGGACCTTACTACTCTACTTGGTACAATCCAACCTCATATGCAAAGTATTTATTTGACTTGGACCTCATTAAATTACCTTAGATCTTAAGTAATCCGGGC AATTTGTTTAATTTAGTGCGGTTGCGAGGAAAAAGAAATCACGATGTTACTTTTCGATTTTAAGTTTTCAAAATCTCCGTCTAATTTTCAGGATACAAAGAATTTTATCAGATATAGGAT AGTCGAGGATATAATCCAAACCGATCCTCCCAATGATTACCTCCATGTGCACAAAATGATATGCTTATGTATTATGTCAACTCTCAAAGTCAGAACCATTTCCTAACTTGCCAAAACAAT TTAAATTTTGCCNGGGGGGCATTCAATGGGCAAGACCAACTGCAGCTTCATCGCGGACAGGCTGTACAATTTCAACAACACTGGCAAGCCAGACCCAAGCATGGACTCATCTTTCTTGGC CCAGATGAGGGTGCAATGCCCACCGAACTCAAAGAATCAAGTGTACCTTGACCCTGACTCAGGCTCCAGCTACAGCTTCAGCAAGTCCTTCTACTCCAGGGTCCTGAACCACCGGGCCGT CCTCGGCATCGACCAGCAGATTGCCGCCAACAACGACAGCTCCCAGATCGCTGAGGAGTACAATGCCAGTTTCGAGGACTTCCGGAAGATTTTCGCCTTGTCAATGAGCCGGATGGGGAA CATCAAGGTCTCAACGGGGAATCAGGGGGAGATTCGCAAGAATTGCCGAGTCGTGAACAGGAAGTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCGGCAGTGGGGATCCAGCCACCGGAGAAGCTGCAGTGGCATTACTACCAGAACTCATGCCGCGACGCGGAGAGGTACGTGAGGAACCAGGTCGAGTTCTACTGGAAGCTGGACAGGAGC CTTGCTCCCAAGCTCATCCGAATGCNCTACTCCGATTGCTTTGTCACGGGGTGTGATGCGTCAATTCTGTTGGACGGGCCATATTCAGAGAAAACGGCACCACAAAATGCAGGGCTTCTA GGGTTTCCTATGGCGGTGATAGACAAGATCAAGCATTCAATGGGCAAGACCAACTGCAGCTTCATCGCGGACAGGCTGTACAATTTCAACAACACTGGCAAGCCAGACCCAAGCATGGAC TCATCTTTCTTGGCCCAGATGAGGGTGCAATGCCCACCGAACTCAAAGAATCAAGTGTACCTTGACCCTGACTCAGGCTCCAGCTACAGCTTCAGCAAGTCCTTCTACTCCAGGGTCCTG AACCACCGGGCCGTCCTCGGCATCGACCAGCAGATTGCCGCCAACAACGACAGCTCCCAGATCGCTGAGGAGTACAATGCCAGTTTCGAGGACTTCCGGAAGATTTTCGCCTTGTCAATG AGCCGGATGGGGAACATCAAGGTCTCAACGGGGAATCAGGGGGAGATTCGCAAGAATTGCCGAGTCGTGAACAGGAAGTAA |
Retrieve as FASTA
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