Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
187 |
PWM (Da): |
20711.48 |
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PI (pH):
| 7.99 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSSCSVWHNI KASATIKPP* KLQWLYYQNL CPDAKKYMWD HVEFYWKEDR TLAPNLI*LF YFDCFVGCDA LILFNGPDSK KTASQNAPLL ALPMETIDKA KEVLEHHCPG VVSCANIINL
AARDAVVLVC NMVCRMSHPF WTGRRDENSS SAKSVDLPLQ AVLGKAVLAY FKSxRGLNVL DLTTLLGTI
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Retrieve as FASTA
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Remarks |
Pseudogene from NGS. 3' and PS are missing due to NNNN. Stops in frame. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCAT GCTCAGTGTG GCACAACATC AAGGCATCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGGGAC
CATGTTGAGT TTTATTGGAA GGAAGACAGG ACTCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCAC CGTACGTGTC ATATGTTTTT TTTCCCTTTC TCAGACGATC
TTGAACTTCG CATCGCnTGC ATCGCTTCAA TATCAGGTTT CCATCGCCTT TCTAAGCACA TGATACCCTT TCACCTAACG GTTTGAACCT CTCAAACCGG GCTTTCTAAT GTACCAGTTT
TTGTAAAACA GGGGTGTGAT GCGTTGATTC TATTCAATGG GCCAGATTCA AAGAAAACAG CATCGCAAAA TGCACCGCTT CTAGCGCTTC CTATGGAGAC GATTGACAAG GCCAAGGAAG
TCCTGGAACA CCATTGTCCC GGGGTAGTAT CTTGCGCCAA CATAATCAAC CTTGCTGCTA GAGATGCTGT TGTCTTGGTA TGCAACATGG TTTGCAGTTT TTTTCCTTTT TGAGCTTGAA
AAGAGATCGT TTAGGCTGCT GCATTGATGA TTGACATGCT GTTAGCTTGA GTTTTGGAGC GTTCGATATG GAAAAAAATT AGAATTATTG ATGCAATAAT GATACTGCGA CATGCGGGAG
GGATGTCGCA CCCCTTTTGG ACGGGGAGAA GGGACGAGAA TTCATCCTCC GCAAAGTCGG TAGACCTCCC GTTGCAGGCT GTCCTGGGGA AAGCGGTGCT CGCTTACTTC AAATCAAnnA
GGGGTTTGAA TGTGCTAGAC CTCACTACTC TACTTGGCAC GATC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCAT GCTCAGTGTG GCACAACATC AAGGCATCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGGGAC
CATGTTGAGT TTTATTGGAA GGAAGACAGG ACTCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCGG GTGTGATGCG TTGATTCTAT TCAATGGGCC AGATTCAAAG
AAAACAGCAT CGCAAAATGC ACCGCTTCTA GCGCTTCCTA TGGAGACGAT TGACAAGGCC AAGGAAGTCC TGGAACACCA TTGTCCCGGG GTAGTATCTT GCGCCAACAT AATCAACCTT
GCTGCTAGAG ATGCTGTTGT CTTGGTATGC AACATGGTTT GCAGGATGTC GCACCCCTTT TGGACGGGGA GAAGGGACGA GAATTCATCC TCCGCAAAGT CGGTAGACCT CCCGTTGCAG
GCTGTCCTGG GGAAAGCGGT GCTCGCTTAC TTCAAATCAA nnAGGGGTTT GAATGTGCTA GACCTCACTA CTCTACTTGG CACGATC
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Retrieve as FASTA
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