Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
280 |
PWM (Da): |
29920.9 |
|
PI (pH):
| 8.07 |
|
Sequence 322
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
LSTIKSSVSSAVKNEARMGASLLRLHFHDCFVNGCDASILLDDITNFTGEKNAGPNANSMRGFEVIDAIKSELESKCPSIVSCADILAVVARDSIVALGGPSWTVNLGRRDSTTASQSAANISIPPPTLNLSGLISTFSNKGFTAKEMVALLGSHTIGQARCLTFREHLYNENNIDATFATSLKANCPSSGGDSKLFPFDTTSPTSFDNAFFKNLQTHKVFLHSDQQLFSGGSTDVHVNAYSSNLSTFRTDFANAMVKMGNLSPLIGSSGQIRKNCRKVN* |
Retrieve as FASTA
|
|
Remarks |
Partial sequence from NGS. 5' and PS are missing due to NNNN. |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTCTCCACCATTAAATCCAGCGTGAGCTCTGCGGTCAAAAACGAGGCCCGCATGGGCGCGTCCTTGCTCCGCCTTCACTTCCACGATTGCTTCGTCAATGCAAGTCCCTCTGCTCTGAGT CTCTCCTCTCTTTCCGATTGATTACTACCATTGTTTCTCTCCTTCATTCAAGCTGAATGCAAGCGAGCATGCATGATGCATCTTTGTGCCTACGCATGTGAAGCGTTCCATCCAACCACA TAGTCAAAAGAATCATTAGATTCGCTTCTACGCAAGTTACTTACTCTCTTTTTCACTAACCAAACAGTAGGTAGGAGGTTGACATATTGAATTAGTTGAGATTTTTGGTGCTTTGTTGTG TCATGCATTTTTGTGAGTTTATTATACCAATAATCAATTCTGTTTATTAGAGCACAATAATTTTTTTGGTAATTCGAAAAAACTTCATGATTATTTTTAGCATACATTGCCGGTGTAAAA ATATTTTTCACAAACAATCTTATCCACCCTTAATTTGGCGGTTAGTGAGAGATTTGGTAATTAGAATCCTCAAATTACGAATGGCCAAGAATGATTATGTAAAATTTTCTTTACATTGAT GGTCTATGCTCTAATTTTCACCGGAAAAAACTATGCAGGAGAGCGTACTTTATGCTAACTATGCTGTTGATCAGATAAATGGGTATATAAATAACATTGGAGCTGGCAAAAAGAGAGAGA TGGCCATTGCTTTTTATATCGGCGGTTGACTTTACTCGGTTATCACATTTGGCTAACCAATCAGTCCTTCTCAATAGATTTTGATCATATTTTGATCACCTCGCTGTGGTAGCCATACAT TTCTACATAAAAAGTGATATGGATGGTAAAGTATCATTTTTAATGAAATTTGATAACTCAATACTATTCTAAAATCGCACTAGATCTTTGAACAAGCAAATCGTGCCTTTTGCATGGCCT CATTAGTTTGCTTTCACACAAATTCAAAGTGTCAATCTAAATTAACTAATCGATTTAGATTAGTATGTTCATANNNNNNNNNNNNNNNNNNNNNCTATTTCAGTAAAGATTATAGCACTT AACTTGTTTTTTTTTTTTTTTGGGTAAGGTATAGCACTTAACTTGTTTGCAACCATTAAATCTAATTAACTCCAATCGGATCAATTTTCTATCTAGAAGGACTGATTAACAACATGTGGC AAAAAACATGAAATCGGGATGCGACGCGTCAATCTTATTGGACGACATTACGAACTTTACCGGGGAGAAGAACGCCGGCCCGAATGCCAATTCCATGCGGGGATTTGAGGTAATTGACGC AATCAAGTCCGAATTGGAGAGCAAGTGCCCCAGTATTGTGTCCTGCGCTGATATTTTAGCCGTCGTTGCACGAGACTCCATCGTTGCCGTAAGTGCACATTTTCTTCTCAATTGTACTTA TCAATTGTGATGAAAAAAATCACATGTTATGTTCCCCATGCTATATTAATACTAACACGTATCGATTTGTTATTTATTTAATTTTTAGTTAGGTGGCCCTAGTTGGACAGTCAACCTTGG AAGAAGAGACTCAACCACTGCAAGTCAAAGTGCTGCTAATATTAGCATTCCTCCCCCAACTTTGAACCTTAGCGGCCTAATCTCTACCTTCTCTAACAAAGGCTTCACAGCTAAAGAAAT GGTGGCACTTTTAGGTCATTGTTTCTTTCTTCTTCTTTTTTTCTTTTTTTTTTGCAATATTTAATAAAGAATAACAATAATGCTCGATCAATATACTAAAATCAATTTACAAAAATTGTT CGACCATTGTTAACAGGGTCGCACACTATAGGTCAAGCCCGATGCCTGACTTTCCGGGAGCATCTTTACAATGAGAACAACATCGATGCCACGTTCGCGACATCGCTGAAAGCAAATTGC CCAAGCTCCGGAGGCGACAGCAAACTCTTTCCTTTTGACACCACAAGCCCGACGTCCTTTGACAACGCCTTCTTCAAGAACTTGCAAACCCACAAGGTTTTTCTTCATTCGGACCAGCAA TTGTTCAGTGGTGGCTCCACGGACGTTCACGTGAATGCTTATAGTAGCAATTTGTCCACTTTTAGGACAGATTTTGCTAACGCCATGGTGAAGATGGGTAACCTTAGCCCACTCATTGGC TCAAGCGGTCAGATTAGAAAGAATTGCAGGAAAGTCAACTGA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTCTCCACCATTAAATCCAGCGTGAGCTCTGCGGTCAAAAACGAGGCCCGCATGGGCGCGTCCTTGCTCCGCCTTCACTTCCACGATTGCTTCGTCAATGGATGCGACGCGTCAATCTTA TTGGACGACATTACGAACTTTACCGGGGAGAAGAACGCCGGCCCGAATGCCAATTCCATGCGGGGATTTGAGGTAATTGACGCAATCAAGTCCGAATTGGAGAGCAAGTGCCCCAGTATT GTGTCCTGCGCTGATATTTTAGCCGTCGTTGCACGAGACTCCATCGTTGCCTTAGGTGGCCCTAGTTGGACAGTCAACCTTGGAAGAAGAGACTCAACCACTGCAAGTCAAAGTGCTGCT AATATTAGCATTCCTCCCCCAACTTTGAACCTTAGCGGCCTAATCTCTACCTTCTCTAACAAAGGCTTCACAGCTAAAGAAATGGTGGCACTTTTAGGGTCGCACACTATAGGTCAAGCC CGATGCCTGACTTTCCGGGAGCATCTTTACAATGAGAACAACATCGATGCCACGTTCGCGACATCGCTGAAAGCAAATTGCCCAAGCTCCGGAGGCGACAGCAAACTCTTTCCTTTTGAC ACCACAAGCCCGACGTCCTTTGACAACGCCTTCTTCAAGAACTTGCAAACCCACAAGGTTTTTCTTCATTCGGACCAGCAATTGTTCAGTGGTGGCTCCACGGACGTTCACGTGAATGCT TATAGTAGCAATTTGTCCACTTTTAGGACAGATTTTGCTAACGCCATGGTGAAGATGGGTAACCTTAGCCCACTCATTGGCTCAAGCGGTCAGATTAGAAAGAATTGCAGGAAAGTCAAC TGA |
Retrieve as FASTA
|
|