Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
280 |
| PWM (Da): |
29920.9 |
|
| PI (pH):
| 8.07 |
|
Sequence 322
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
LSTIKSSVSSAVKNEARMGASLLRLHFHDCFVNGCDASILLDDITNFTGEKNAGPNANSMRGFEVIDAIKSELESKCPSIVSCADILAVVARDSIVALGGPSWTVNLGRRDSTTASQSAANISIPPPTLNLSGLISTFSNKGFTAKEMVALLGSHTIGQARCLTFREHLYNENNIDATFATSLKANCPSSGGDSKLFPFDTTSPTSFDNAFFKNLQTHKVFLHSDQQLFSGGSTDVHVNAYSSNLSTFRTDFANAMVKMGNLSPLIGSSGQIRKNCRKVN* |
Retrieve as FASTA
|
|
| Remarks |
Partial sequence from NGS. 5' and PS are missing due to NNNN. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTCTCCACCATTAAATCCAGCGTGAGCTCTGCGGTCAAAAACGAGGCCCGCATGGGCGCGTCCTTGCTCCGCCTTCACTTCCACGATTGCTTCGTCAATGCAAGTCCCTCTGCTCTGAGT
CTCTCCTCTCTTTCCGATTGATTACTACCATTGTTTCTCTCCTTCATTCAAGCTGAATGCAAGCGAGCATGCATGATGCATCTTTGTGCCTACGCATGTGAAGCGTTCCATCCAACCACA
TAGTCAAAAGAATCATTAGATTCGCTTCTACGCAAGTTACTTACTCTCTTTTTCACTAACCAAACAGTAGGTAGGAGGTTGACATATTGAATTAGTTGAGATTTTTGGTGCTTTGTTGTG
TCATGCATTTTTGTGAGTTTATTATACCAATAATCAATTCTGTTTATTAGAGCACAATAATTTTTTTGGTAATTCGAAAAAACTTCATGATTATTTTTAGCATACATTGCCGGTGTAAAA
ATATTTTTCACAAACAATCTTATCCACCCTTAATTTGGCGGTTAGTGAGAGATTTGGTAATTAGAATCCTCAAATTACGAATGGCCAAGAATGATTATGTAAAATTTTCTTTACATTGAT
GGTCTATGCTCTAATTTTCACCGGAAAAAACTATGCAGGAGAGCGTACTTTATGCTAACTATGCTGTTGATCAGATAAATGGGTATATAAATAACATTGGAGCTGGCAAAAAGAGAGAGA
TGGCCATTGCTTTTTATATCGGCGGTTGACTTTACTCGGTTATCACATTTGGCTAACCAATCAGTCCTTCTCAATAGATTTTGATCATATTTTGATCACCTCGCTGTGGTAGCCATACAT
TTCTACATAAAAAGTGATATGGATGGTAAAGTATCATTTTTAATGAAATTTGATAACTCAATACTATTCTAAAATCGCACTAGATCTTTGAACAAGCAAATCGTGCCTTTTGCATGGCCT
CATTAGTTTGCTTTCACACAAATTCAAAGTGTCAATCTAAATTAACTAATCGATTTAGATTAGTATGTTCATANNNNNNNNNNNNNNNNNNNNNCTATTTCAGTAAAGATTATAGCACTT
AACTTGTTTTTTTTTTTTTTTGGGTAAGGTATAGCACTTAACTTGTTTGCAACCATTAAATCTAATTAACTCCAATCGGATCAATTTTCTATCTAGAAGGACTGATTAACAACATGTGGC
AAAAAACATGAAATCGGGATGCGACGCGTCAATCTTATTGGACGACATTACGAACTTTACCGGGGAGAAGAACGCCGGCCCGAATGCCAATTCCATGCGGGGATTTGAGGTAATTGACGC
AATCAAGTCCGAATTGGAGAGCAAGTGCCCCAGTATTGTGTCCTGCGCTGATATTTTAGCCGTCGTTGCACGAGACTCCATCGTTGCCGTAAGTGCACATTTTCTTCTCAATTGTACTTA
TCAATTGTGATGAAAAAAATCACATGTTATGTTCCCCATGCTATATTAATACTAACACGTATCGATTTGTTATTTATTTAATTTTTAGTTAGGTGGCCCTAGTTGGACAGTCAACCTTGG
AAGAAGAGACTCAACCACTGCAAGTCAAAGTGCTGCTAATATTAGCATTCCTCCCCCAACTTTGAACCTTAGCGGCCTAATCTCTACCTTCTCTAACAAAGGCTTCACAGCTAAAGAAAT
GGTGGCACTTTTAGGTCATTGTTTCTTTCTTCTTCTTTTTTTCTTTTTTTTTTGCAATATTTAATAAAGAATAACAATAATGCTCGATCAATATACTAAAATCAATTTACAAAAATTGTT
CGACCATTGTTAACAGGGTCGCACACTATAGGTCAAGCCCGATGCCTGACTTTCCGGGAGCATCTTTACAATGAGAACAACATCGATGCCACGTTCGCGACATCGCTGAAAGCAAATTGC
CCAAGCTCCGGAGGCGACAGCAAACTCTTTCCTTTTGACACCACAAGCCCGACGTCCTTTGACAACGCCTTCTTCAAGAACTTGCAAACCCACAAGGTTTTTCTTCATTCGGACCAGCAA
TTGTTCAGTGGTGGCTCCACGGACGTTCACGTGAATGCTTATAGTAGCAATTTGTCCACTTTTAGGACAGATTTTGCTAACGCCATGGTGAAGATGGGTAACCTTAGCCCACTCATTGGC
TCAAGCGGTCAGATTAGAAAGAATTGCAGGAAAGTCAACTGA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTCTCCACCATTAAATCCAGCGTGAGCTCTGCGGTCAAAAACGAGGCCCGCATGGGCGCGTCCTTGCTCCGCCTTCACTTCCACGATTGCTTCGTCAATGGATGCGACGCGTCAATCTTA
TTGGACGACATTACGAACTTTACCGGGGAGAAGAACGCCGGCCCGAATGCCAATTCCATGCGGGGATTTGAGGTAATTGACGCAATCAAGTCCGAATTGGAGAGCAAGTGCCCCAGTATT
GTGTCCTGCGCTGATATTTTAGCCGTCGTTGCACGAGACTCCATCGTTGCCTTAGGTGGCCCTAGTTGGACAGTCAACCTTGGAAGAAGAGACTCAACCACTGCAAGTCAAAGTGCTGCT
AATATTAGCATTCCTCCCCCAACTTTGAACCTTAGCGGCCTAATCTCTACCTTCTCTAACAAAGGCTTCACAGCTAAAGAAATGGTGGCACTTTTAGGGTCGCACACTATAGGTCAAGCC
CGATGCCTGACTTTCCGGGAGCATCTTTACAATGAGAACAACATCGATGCCACGTTCGCGACATCGCTGAAAGCAAATTGCCCAAGCTCCGGAGGCGACAGCAAACTCTTTCCTTTTGAC
ACCACAAGCCCGACGTCCTTTGACAACGCCTTCTTCAAGAACTTGCAAACCCACAAGGTTTTTCTTCATTCGGACCAGCAATTGTTCAGTGGTGGCTCCACGGACGTTCACGTGAATGCT
TATAGTAGCAATTTGTCCACTTTTAGGACAGATTTTGCTAACGCCATGGTGAAGATGGGTAACCTTAGCCCACTCATTGGCTCAAGCGGTCAGATTAGAAAGAATTGCAGGAAAGTCAAC
TGA |
Retrieve as FASTA
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