Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
284 (262) |
PWM (Da): |
31203.24 (28803.0) |
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PI (pH):
| 10.46 (10.54) |
Peptide Signal:
| cut: 23 range:23-284 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAPV*FNLVH AFILLTLETT AFAIMLRAEL TxxxGYDASI LLDSMPSFAS EKFAIPNNNS VRGFEVINWI KATVNEARGG PVVSCADILA IAA*DSVIAI SKGWPKYYR* TRDSNAARRT
xVEGSAQKKR LNRGKQGRGS SISSFAF*QY L*HNQVLHKS KPRH**LGRP VRCTHTRICS VHNIQRTFAH SLQLFCPPFP INESDPRLAA LDQTPAVFDT LYYKNLLQQK GLLHSDQALL
NNRLAAKLVK SYSEEGERFQ REFTKSMVKM GNIKPLTGER GQGRCDCRRA N
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Retrieve as FASTA
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Remarks |
Pseudogene from NGS. 5' and PS are missing due to NNNN. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCCAG TTTGATTCAA TCTTGTCCAT GCATTTATCT TGTTAACTCT CGAGACCACA GCTTTCGCCA TTATGCTCCG TGCCGAGCTC ACACnnnnnn nnnnnnnnnn nnnnnGTCCT
CAAATGGGTA CTAAGATGTC TATGCGTACT TTTTGCACAC CTTTTTATTT GCTCTTATTA TGTGCATGCT TAATGAGTTC TGGGATAATT GATAATGCAG GGATACGACG CTTCAATTCT
TTTGGACTCT ATGCCTTCCT TTGCTAGCGA AAAGTTTGCC ATTCCTAATA ACAATTCAGT CAGAGGATTC GAAGTAATCA ACTGGATCAA GGCAACAGTT AATGAAGCTC GTGGAGGCCC
TGTGGTCTCT TGTGCAGACA TCTTGGCCAT CGCTGCCTGA GACTCTGTCA TAGCGGTACG TATTAATTAC TCGCATTATC GTCCAATTTC TAAAGGATGG CCTAAATACT ACAGATGAAC
AAGAGACAAC AAATATGTGG GAATAATTTG TTATTATTCC AATGCAGCTA GGAGGACTnn nGTGGAAGGT TCGGCTCAGA AGAAGAGACT CAACCGTGGC AAGCAAGGAC GAGGCTCAAG
CATCTCTTCC TTCGCCTTTT AGCAATATCT CTAACATAAC CAAGTCCTTC ATAAATCAAA GCCTCGACAT TAATGACTTG GTCGTCCTGT CCGGTGCACA CACACTAGGA TATGCTCGGT
GCACAATATT CAGAGGACGG ATCTACAGTG ACACAAACAT TGACCGACCT TTGCACACAG CCTTCAGTTG TTTTGCCCAC CCTTTCCAAT CAACGAATCC GACCCTAGGC TCGCTGCTTT
GGATCAAACT CCTGCTGTCT TTGATACTTT GTACTATAAA AACTTGTTAC AGCAAAAAGG GCTTCTCCAT TCTGATCAGG CGCTTCTCAA CAATCGCCTA GCTGCCAAGC TGGTCAAGTC
TTACAGCGAA GAAGGCGAGA GGTTTCAGAG AGAATTCACG AAATCCATGG TTAAGATGGG AAACATAAAG CCTTTGACTG GTGAACGTGG CCAAGGTCGA TGCGACTGTA GACGAGCGAA
C
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCCAG TTTGATTCAA TCTTGTCCAT GCATTTATCT TGTTAACTCT CGAGACCACA GCTTTCGCCA TTATGCTCCG TGCCGAGCTC ACACnnnnnn nnGGATACGA CGCTTCAATT
CTTTTGGACT CTATGCCTTC CTTTGCTAGC GAAAAGTTTG CCATTCCTAA TAACAATTCA GTCAGAGGAT TCGAAGTAAT CAACTGGATC AAGGCAACAG TTAATGAAGC TCGTGGAGGC
CCTGTGGTCT CTTGTGCAGA CATCTTGGCC ATCGCTGCCT GAGACTCTGT CATAGCGATT TCTAAAGGAT GGCCTAAATA CTACAGATGA ACAAGAGACT CCAATGCAGC TAGGAGGACT
nnnGTGGAAG GTTCGGCTCA GAAGAAGAGA CTCAACCGTG GCAAGCAAGG ACGAGGCTCA AGCATCTCTT CCTTCGCCTT TTAGCAATAT CTCTAACATA ACCAAGTCCT TCATAAATCA
AAGCCTCGAC ATTAATGACT TGGTCGTCCT GTCCGGTGCA CACACACTAG GATATGCTCG GTGCACAATA TTCAGAGGAC GTTTGCACAC AGCCTTCAGT TGTTTTGCCC ACCCTTTCCA
ATCAACGAAT CCGACCCTAG GCTCGCTGCT TTGGATCAAA CTCCTGCTGT CTTTGATACT TTGTACTATA AAAACTTGTT ACAGCAAAAA GGGCTTCTCC ATTCTGATCA GGCGCTTCTC
AACAATCGCC TAGCTGCCAA GCTGGTCAAG TCTTACAGCG AAGAAGGCGA GAGGTTTCAG AGAGAATTCA CGAAATCCAT GGTTAAGATG GGAAACATAA AGCCTTTGAC TGGTGAACGT
GGCCAAGGTC GATGCGACTG TAGACGAGCG AAC
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Retrieve as FASTA
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