Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
245 (294) |
| PWM (Da): |
26882.4 (31097.1) |
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| PI (pH):
| 8.68 (6.34) |
Peptide Signal:
| cut: 26 range:26-319 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
SLTASTLSTR PYKNDLTPYF YDYVxGAVQQ ERRMGASLLR LHFHDCFVNG CDGSILLDST ATIESEKFAA PNNNSARGFE VIDQIKAEVD RVCLGGPSAS RTTANNDIPA PNMDLPALIN
NFKKQGLKVK DLxRTFNDSN INQAFAKNLR SYCPRTGSDS NLASLDPTPA RFDTLYYNNL LTQKGLLHSD QALSTGESAL ELVKSYSYNY EAFWKDFAKS MVRMGNIKPL TGNQGQIRSN
CRRVD
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. 5' and PS are missing due to NNNN. No EST. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCCCTCACGG CCTCAACTCT TTCGACTCGT CCCTACAAGA ACGACCTCAC GCCATACTTC TACGACTACG TTTGnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnGA GGGGGCGGTG
CAGCAAGAGC GACGCATGGG CGCTTCCTTG CTGCGCTTGC ACTTTCACGA CTGTTTCGTC AATGTAAGAC ATnnnTGCCA GCTAACTTTC ACATTAATTT GTTCTCAAAA ATAGTGATTA
CTATTCAGCG TAACACAACA TTTGCCAACA TTGATTTATG TTTGGGTGTC GAATGATGCA GGGTTGTGAT GGGTCGATAC TCTTGGATTC AACCGCAACC ATCGAGAGTG AAAAGTTCGC
GGCTCCTAAT AACAATTCGG CTAGAGGTTT CGAAGTGATC GACCAAATAA AGGCGGAGGT TGACAGAGTA TGTGTACGTC TAGTTTTACT GCATCCCGTG ATGACCATTA ATCAGCAAAT
CTAAATGGAG ACCATCATTT GCTTAGTTGA TTTTCATGCG CCGTAAGACA TTGCCAATCC GAATTAGGTG TTAACTTCTT TCATATTTCA GTTAGGAGGG CCTTCnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnGCGAGCAG GACGACGGCA AACAACGACA TCCCTGCGCC GAACATGGAC TTACCTGCCT TAATTAACAA TTTCAAGAAA CAAGGCCTTA AGGTCAAGGA
CTTGGTnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nAGGACATTC AATGACAGCA ACATCAACCA GGCATTCGCA AAGAATCTCC GGTCCTACTG
CCCGCGCACA GGAAGCGACT CTAACCTCGC AAGTTTAGAT CCCACGCCAG CGCGTTTCGA CACATTGTAC TACAATAACC TGTTGACCCA GAAGGGCCTT CTTCACTCTG ATCAGGCACT
GTCAACTGGT GAATCCGCAC TCGAGCTAGT GAAGAGCTAT AGCTACAATT ATGAAGCATT TTGGAAGGAT TTCGCTAAAT CGATGGTCAG GATGGGAAAT ATCAAGCCAC TGACCGGAAA
CCAAGGTCAA ATTCGCTCGA ATTGCCGGAG GGTGGATTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCCCTCACGG CCTCAACTCT TTCGACTCGT CCCTACAAGA ACGACCTCAC GCCATACTTC TACGACTACG TTTGnGGGGC GGTGCAGCAA GAGCGACGCA TGGGCGCTTC CTTGCTGCGC
TTGCACTTTC ACGACTGTTT CGTCAATGGT TGTGATGGGT CGATACTCTT GGATTCAACC GCAACCATCG AGAGTGAAAA GTTCGCGGCT CCTAATAACA ATTCGGCTAG AGGTTTCGAA
GTGATCGACC AAATAAAGGC GGAGGTTGAC AGAGTATGTT TAGGAGGGCC TTCnGCGAGC AGGACGACGG CAAACAACGA CATCCCTGCG CCGAACATGG ACTTACCTGC CTTAATTAAC
AATTTCAAGA AACAAGGCCT TAAGGTCAAG GACTTGnnnA GGACATTCAA TGACAGCAAC ATCAACCAGG CATTCGCAAA GAATCTCCGG TCCTACTGCC CGCGCACAGG AAGCGACTCT
AACCTCGCAA GTTTAGATCC CACGCCAGCG CGTTTCGACA CATTGTACTA CAATAACCTG TTGACCCAGA AGGGCCTTCT TCACTCTGAT CAGGCACTGT CAACTGGTGA ATCCGCACTC
GAGCTAGTGA AGAGCTATAG CTACAATTAT GAAGCATTTT GGAAGGATTT CGCTAAATCG ATGGTCAGGA TGGGAAATAT CAAGCCACTG ACCGGAAACC AAGGTCAAAT TCGCTCGAAT
TGCCGGAGGG TGGATTGA
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Retrieve as FASTA
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