Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
327 (307) |
PWM (Da): |
34570.47 (32639.4) |
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PI (pH):
| 8.01 (8.39) |
Peptide Signal:
| cut: 21 range:21-327 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDTHLVVVLA LLAAAAAAEA KMSADYYSKT CPRADRIIAD VLAQKQISNP TTAAGVLRLF FHDCFVGGCD ASVLVASTAA ARSERDADVN LSLPGDAFDA LARAKAALEV ECPGVVSCAD
LLAVAARDLV TMTGGPYYPL RLGRKDGLSS SPSAPDAEIP HANLTVSRLV AVFAAKGFTV QDLVALSGAH TLGFSHCKEF AARIYGGGGG GADPTMNPAL AKRLQEACRD YRRGPTIAAF
NDVMTPGRFD NMYFVNLRRG LGLLATDQEL YGDARTRPHV ERYAANETAF FADFARAARR LSHHGVKNGA NGEVRRRCDA YNGGPRG
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 6, no intron). No ESTs. Incorrect prediction from Phytozome (splicing error; 1รจ extra short exons in 3') |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGACACTC ACCTCGTCGT CGTCCTGGCA TTGCTCGCCG CCGCCGCCGC GGCGGAGGCC AAGATGTCGG CGGACTACTA CAGCAAGACG TGCCCGCGCG CGGACCGGAT CATCGCCGAC
GTGCTGGCGC AGAAGCAGAT CTCCAACCCT ACGACGGCGG CGGGCGTCCT CCGCCTCTTC TTCCACGACT GCTTCGTCGG CGGCTGCGAC GCGTCCGTGC TGGTCGCGTC CACCGCCGCG
GCGCGCTCCG AGCGCGACGC CGACGTGAAC CTGTCGCTCC CGGGTGACGC CTTCGACGCC CTGGCGCGCG CCAAGGCGGC GCTGGAGGTG GAGTGCCCGG GCGTCGTCTC CTGCGCCGAC
CTCCTCGCCG TCGCGGCGCG CGACCTCGTC ACCATGACGG GGGGGCCCTA CTACCCGCTC CGCCTCGGCC GCAAGGACGG GCTCTCCTCC TCGCCGTCGG CGCCCGACGC CGAGATCCCG
CACGCCAACC TCACCGTCTC CCGCCTCGTC GCCGTGTTCG CCGCCAAGGG CTTCACCGTC CAGGACCTCG TCGCGCTCTC CGGCGCACAC ACCCTCGGCT TCTCCCATTG CAAGGAGTTC
GCCGCCCGCA TCTACGGCGG CGGCGGTGGC GGCGCCGACC CGACCATGAA CCCGGCGCTC GCGAAGCGGC TGCAGGAGGC GTGCAGGGAC TACCGGAGGG GCCCGACCAT CGCGGCGTTC
AACGACGTGA TGACGCCGGG GAGGTTCGAC AACATGTACT TCGTCAACCT CCGGCGAGGC CTCGGCCTCC TCGCCACCGA CCAGGAGCTC TACGGCGACG CGCGGACGCG GCCGCACGTG
GAGCGGTACG CCGCCAACGA GACGGCGTTC TTCGCCGACT TCGCGCGCGC CGCCCGGAGG CTCAGCCACC ACGGCGTCAA GAACGGCGCC AACGGCGAGG TGCGCCGCCG GTGCGACGCC
TACAACGGCG GCCCGCGCGG CTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGACACTC ACCTCGTCGT CGTCCTGGCA TTGCTCGCCG CCGCCGCCGC GGCGGAGGCC AAGATGTCGG CGGACTACTA CAGCAAGACG TGCCCGCGCG CGGACCGGAT CATCGCCGAC
GTGCTGGCGC AGAAGCAGAT CTCCAACCCT ACGACGGCGG CGGGCGTCCT CCGCCTCTTC TTCCACGACT GCTTCGTCGG CGGCTGCGAC GCGTCCGTGC TGGTCGCGTC CACCGCCGCG
GCGCGCTCCG AGCGCGACGC CGACGTGAAC CTGTCGCTCC CGGGTGACGC CTTCGACGCC CTGGCGCGCG CCAAGGCGGC GCTGGAGGTG GAGTGCCCGG GCGTCGTCTC CTGCGCCGAC
CTCCTCGCCG TCGCGGCGCG CGACCTCGTC ACCATGACGG GGGGGCCCTA CTACCCGCTC CGCCTCGGCC GCAAGGACGG GCTCTCCTCC TCGCCGTCGG CGCCCGACGC CGAGATCCCG
CACGCCAACC TCACCGTCTC CCGCCTCGTC GCCGTGTTCG CCGCCAAGGG CTTCACCGTC CAGGACCTCG TCGCGCTCTC CGGCGCACAC ACCCTCGGCT TCTCCCATTG CAAGGAGTTC
GCCGCCCGCA TCTACGGCGG CGGCGGTGGC GGCGCCGACC CGACCATGAA CCCGGCGCTC GCGAAGCGGC TGCAGGAGGC GTGCAGGGAC TACCGGAGGG GCCCGACCAT CGCGGCGTTC
AACGACGTGA TGACGCCGGG GAGGTTCGAC AACATGTACT TCGTCAACCT CCGGCGAGGC CTCGGCCTCC TCGCCACCGA CCAGGAGCTC TACGGCGACG CGCGGACGCG GCCGCACGTG
GAGCGGTACG CCGCCAACGA GACGGCGTTC TTCGCCGACT TCGCGCGCGC CGCCCGGAGG CTCAGCCACC ACGGCGTCAA GAACGGCGCC AACGGCGAGG TGCGCCGCCG GTGCGACGCC
TACAACGGCG GCCCGCGCGG CTGA
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Retrieve as FASTA
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