Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
303 (310) |
| PWM (Da): |
28594.25 (35101.0) |
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| PI (pH):
| 7.99 (7.80) |
Peptide Signal:
| cut: 25 range:25-334 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TLSTRPYKNG LTPYFYDYVC PQxxxxxxxx xxxxxxxxxx xxxxLLRLHF HDCFVNGCDG SILLDSTATI ESEKFAAPNN NSARGFEVID QIKAEVDRVC GHPVVSCADI LAVTARDSVV
Axxxxxxxxx xxxxxxxxxx xxxANNDIPA PNMDLPALIN NFKRQGLKVK DLVALSGAHT IGFAQCFTFR NRTFNDSNIN QAFAKNLRSY CPRTGSDSNL ASLDPTPARF DTLYYNNLLT
QKGLLHSDQA LSTGESALEL VKSYSHDYEA FWKDFAKSMV RMGNIKPLTG NQGQIRSNCR RLN
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. 5' is missing due to NNNN. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACTCTTTCGA CTCGTCCTTA CAAGAATGGC CTCACGCCAT ACTTCTACGA CTACGTTTGC CCTCAAnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnTTGCTGCG CTTGCACTTT CACGACTGTT TCGTCAATGT AAGACATATA TGTGCCAGCT AACTTTCACA TTAATCTGTT CTCAAAAATA CTGATTACTA TTCAGCGTAA
CACAACATTT GCCAACATTG ATTTATGTTT GGGTGTCGAA TGATGCAGGG TTGTGATGGG TCGATACTCT TGGATTCAAC CGCAACCATC GAGAGTGAAA AGTTCGCGGC TCCTAATAAC
AATTCGGCCA GAGGTTTCGA AGTGATCGAC CAAATAAAGG CGGAGGTTGA CAGAGTATGT GGACATCCCG TGGTTTCTTG TGCAGACATC TTGGCTGTCA CCGCTCGTGA CTCTGTCGTT
GCGGTACGTC TAGTTTTACT GCATCCCGTG ATGACCATTA ATCAGCAAAT CTAAATGGAG ACCATCATTG ACTTAGTTGA TTTTCATGCG CCGTAAGACA TTGCCAATCC GAATTAGGTG
TTAACTTCTT TCATATTTCA Gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnGCA AACAACGACA TCCCTGCGCC GAACATGGAC
TTACCCGCCT TAATTAACAA TTTCAAGAGA CAAGGCCTGA AGGTCAAGGA CTTGGTCGCG CTGAGCGGCG CTCACACAAT CGGCTTCGCA CAGTGCTTTA CTTTCAGGAA TAGGACATTC
AATGACAGCA ACATCAACCA GGCATTCGCA AAGAATCTCC GGTCCTACTG CCCGCGCACA GGAAGCGACT CTAACCTCGC AAGTTTAGAT CCCACGCCAG CGCGTTTCGA CACATTGTAC
TACAATAACC TGTTGACCCA GAAGGGCCTT CTTCACTCTG ATCAGGCACT GTCAACTGGT GAATCCGCAC TCGAGCTAGT GAAGAGCTAT AGCCACGATT ATGAAGCATT TTGGAAGGAT
TTCGCTAAAT CGATGGTCAG GATGGGAAAT ATCAAGCCAC TGACCGGAAA CCAAGGTCAA ATTCGCTCGA ATTGCCGGAG GTTGAATTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACTCTTTCGA CTCGTCCTTA CAAGAATGGC CTCACGCCAT ACTTCTACGA CTACGTTTGC CCTCAAnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnTTGCTGCG CTTGCACTTT CACGACTGTT TCGTCAATGG TTGTGATGGG TCGATACTCT TGGATTCAAC CGCAACCATC GAGAGTGAAA AGTTCGCGGC TCCTAATAAC
AATTCGGCCA GAGGTTTCGA AGTGATCGAC CAAATAAAGG CGGAGGTTGA CAGAGTATGT GGACATCCCG TGGTTTCTTG TGCAGACATC TTGGCTGTCA CCGCTCGTGA CTCTGTCGTT
GCGnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnG CAAACAACGA CATCCCTGCG CCGAACATGG ACTTACCCGC CTTAATTAAC
AATTTCAAGA GACAAGGCCT GAAGGTCAAG GACTTGGTCG CGCTGAGCGG CGCTCACACA ATCGGCTTCG CACAGTGCTT TACTTTCAGG AATAGGACAT TCAATGACAG CAACATCAAC
CAGGCATTCG CAAAGAATCT CCGGTCCTAC TGCCCGCGCA CAGGAAGCGA CTCTAACCTC GCAAGTTTAG ATCCCACGCC AGCGCGTTTC GACACATTGT ACTACAATAA CCTGTTGACC
CAGAAGGGCC TTCTTCACTC TGATCAGGCA CTGTCAACTG GTGAATCCGC ACTCGAGCTA GTGAAGAGCT ATAGCCACGA TTATGAAGCA TTTTGGAAGG ATTTCGCTAA ATCGATGGTC
AGGATGGGAA ATATCAAGCC ACTGACCGGA AACCAAGGTC AAATTCGCTC GAATTGCCGG AGGTTGAATT GA
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Retrieve as FASTA
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