Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
169 (248) |
| PWM (Da): |
18049.11 (26352.0) |
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| PI (pH): |
9.66 (7.14) |
Peptide Signal: |
cut: 23 range:23-270 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
SSKARMGVPL LRLCFHDCFI NAHGLILLEY TANFAKKKNV SPNANSIQVF EVIDMIKSQL ESTCPRVVSY ANTLVVTA*D SIVALSGPNW TVSLGRRDST GASQSAAFTV KEMAALLGSH
TIGQA*CLTF RSATFMTDFS NAMVKMGNLN PLTGSSSQIR KNYGKVNSCS F
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Retrieve as FASTA
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| Remarks |
Pseudogene from NGS. 5' and PS are missing due to NNNN. Stop in frame. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCGAGCAAGG CGCGCATGGG TGTGCCGCTG CTCCGCCTTT GCTTCCACGA TTGCTTCATC AATGCAAGCC TCTCTnnnnn nnnnnnnnnn nnnnTTTCCG ATTGATTTTT ACCTTTGTTT
TTCTCTTTAA TTCAAGCTGC GTGCAAGCGT GCATGCATGA TGCATCTTCG TGCTTGTGCG TGTGAAGCAT TCCAACCAAC CACGTTGTCA AAAGAATTAT TAGATTCGCG TCTACACAAG
TTAGGTAGGA GGTTCACATA TTGAATTnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnGGT GCCATGCATT TTTGTGAGTT TATTATATTA TTAATCGATT TTGTTTGTTA TAACAAAATA
TTTTTTTTGG TAAATGAAAA AAACTTnnnn nnnnnnnnnn nnnnnnnnCG CTGCCGGTGT AAAAATGGTT TTTTACAAAC GGGCTTATCC ACCCTTAATT TGGCTGTTAG TGAGGGATTT
GGAATCTTCA AATCATGGAT AAGAATGGTT Annnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnTAT ATGTGATTAA
CTACCTGGTT TAAATCCAAT GAACTCGATG AATTGGATCA CGTAAAGTCC TGAACGTTGG AGCTTAAAAA TGATATTTTA TGGTAAATTA TCATTTTTAA TGAAATATGT TAATCAAATG
GTACTCTAAA ATCTTATTAG ATATTTGAAC AAGCGAATCG CGCCTTGTGC ATGGCCTCAC TAGTTTGCTT CCACACAAAT TTAGAGTGTC AATCTAAATA AACCAATCAA TTTAGTGTAC
CTACTTTGTT ATCCTCTTCA TCTTCTTTGT GCATAATTTT AGAGTAGTCT ATATCCTAAT GAGGGGTAAG TACATTAAAA GTACCAAAAG CTGTATACAG CGCTCACTTT AGTGCCAAAA
ATTTTCGCCG GCTCACTTAA ATGCCAAATC nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnAAAT TGATTATGTC TCATTTATAA
TTAAAATTTT AATATGACTT GACAAATTTT TTAAAAACTC CAATCCATGT GGCATTTnnn nnnnnnnTGC TTGGCAATGA AGTGATGGCT TTTTAATAAC AACTAGTTCT AAAGTGATCA
CTTTAAACAA AATTTAGCAT TTAAATTATC ACTATTTACA AATTTTGAAC GACGTCGTTT ATGTGTTATA TGCTGACTAG GCACGTTGGC GAGCCACGTA GGACTGAGAA ATTAATAAAA
CACAATCACG TCGGATTTCT GGTAACCCAA ACCAGAAnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnCTTTTA ACACTAAAGT GAGTATTGTA
CACAACTTTT GACACTTTTA GTATATTTAT CCCTCCTAAT GGAGCTTTCT CCATCAAACA TGTCTCTATT TCAATCTCAA CATTCAAAGC CCGATCGGGC TTTTATGGAT GCATTGTTCC
TTCAGAGAAA ACACGAAGCA AAGTCGTAAG GCACGAGAAA AATTGGAGAA CTTCCTATTT AGTGTCACCC CGTCAAAACT GGTGTCTCTA GGCGTTCATG ATGGGGACAA AAAGGTGGAA
AAGGATAGGG GAAAAATTCA ATGTCCGTAC TCGATTTTCA GGAAAAATTA TAGCCTTTAA CCCGTTTGCA ACCATTGAAT TTAATGGACT CCAATCCCAT CGATTTTCTA TTTAGAAGGA
CTAATGTGTG GCGTAGATGA CACGGGTTGA TTTTATTGGA GTACACCGCA AACTTCGCTA AGAAGAAGAA TGTTAGCCCG AATGCCAATT CTATACAGGT ATTCGAGGTG ATTGATATGA
TCAAGTCCCA ACTAGAGAGC ACGTGCCCCA GGGTCGTATC CTATGCCAAC ACATTGGTTG TTACTGCATG AGATTCCATC GTTGCCTTAA GTGCACATTT TCTTCTCAAT TCTAGTGATC
AATTGTGAGG AGAAAAAAAT CACATGTTAT GTTCTCCATG CTATATTAAT ACTAACACAT ATGTATTTAT TTTTTACTTA ATTTTTAGTT AGGTGGCCCG AATTGGACAG TCTCACTTGG
AAGAAGAGAC TCAACCGGCG CAAGCCAAAG TGCTGCTTTC ACCGTCAAAG AAATGGCGGC ACTCTTAGGT CATnnnnnnn nnTTTTTTCA CCTATTAAAA AAGAATTTAT GATAATGCTC
GATCAATATA CTGAGAACAA TTTACAAAAC ATTGTTTGAT TGTTTGTTAA CAAAATCGCA CACGATAGGT CAAGCCTGAT GCTTGACTTT CCGGGnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnT CGGCAACTTT CATGACAGAT TTTTCTAACG CTATGGTGAA
GATGGGAAAC CTCAACCCGC TCACCGGCTC AAGCAGTCAA ATTAGGAAGA ACTATGGAAA AGTCAACTCA TGTTCGTTC
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCGAGCAAGG CGCGCATGGG TGTGCCGCTG CTCCGCCTTT GCTTCCACGA TTGCTTCATC AATGCACACG GGTTGATTTT ATTGGAGTAC ACCGCAAACT TCGCTAAGAA GAAGAATGTT
AGCCCGAATG CCAATTCTAT ACAGGTATTC GAGGTGATTG ATATGATCAA GTCCCAACTA GAGAGCACGT GCCCCAGGGT CGTATCCTAT GCCAACACAT TGGTTGTTAC TGCATGAGAT
TCCATCGTTG CCTTAAGTGG CCCGAATTGG ACAGTCTCAC TTGGAAGAAG AGACTCAACC GGCGCAAGCC AAAGTGCTGC TTTCACCGTC AAAGAAATGG CGGCACTCTT AGGTTCGCAC
ACGATAGGTC AAGCCTGATG CTTGACTTTC CGGTCGGCAA CTTTCATGAC AGATTTTTCT AACGCTATGG TGAAGATGGG AAACCTCAAC CCGCTCACCG GCTCAAGCAG TCAAATTAGG
AAGAACTATG GAAAAGTCAA CTCATGTTCG TTC
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Retrieve as FASTA
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