Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
333 (304) |
PWM (Da): |
36787.15 (33696.5) |
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PI (pH): |
5.4 (5.10) |
Peptide Signal: |
cut: 30 range:30-333 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MATGSFRHYG LGFVLLSLLL QLLSVTCIGS SELQSNYYAE SCPNAEEIIK QGVAKLYDEH GNTAISWIRN LFHDCMVQSC DASLLLESKH GNGIVSEQAS SRSFGMRNFK YVTKIKEALE
KECPATVSCA DIIALSARDG TVLLGGPRIE MRSGRRDGRE SHASVVEEFI PNHNDSMALV LSRFESVGID AEGTVALLGA HSVGRVHCVN LYDRLYPTVD PTLDSDYAEY LKGRCPMPDP
NPEKVRYSRN DRETPMVLDN MYYKHLLAHK GLLLVDQQLA SDPTTAPFVE KMAADNGYFQ DQFARAMLAL SENNPLTGDE GEIRKDCRYI NAV
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Retrieve as FASTA
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| Remarks |
Complete sequence from NGS (5' is missing due to NNNN) and 1 EST. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCACCG GAAGCTTCCG TCATTACGGC TTAGGCTTTG TCCTTCTGTC ATTGCTCCTC CAGCTTCTGT CGGTTACGTG CATAGGTTCC AGTGAACTTC AGTCGAATTA CTATGCCGAG
AGCTGTCCGA ACGCAGAAGA AATCATCAAA CAAGAAGTCG CCAAGCTCTA CGATGAACAT GGCAATACCG CCATCTCCTG GATTCGCAAT CTCTTTCATG ACTGCATGGT CCAAATTAGT
GTTGAAGCAT GCTGAATTAT CTTTCATCTT CTGGGTATCG AACGGAACTG ATGTACGGCT CTCTGTCGCT GnCCTCTACG AATCGCTAGT CCTGCGATGC CTCGCTCCTG CTAGAATCAA
AGCACGGAAA CGGGATCGTG TCGGAGCAGG CATCTTCAAG GAGCTTCGGG ATGAGGAATT TCAAGTACGT GACCAAGATC AAGGAGGCTC TAGAGAAGGA ATGCCCCGCG ACGGTCTCTT
GCGCCGACAT CATCGCCCTC TCCGCGAGAG ATGGCACCGT TCTCGTAAGT GTTTCGATAA TTCACTTTTA CGCCATCTTT TTTTCTGCAC GGCTTGCGTA AAACACGGAG CCTGCCAAAG
GGACGGATCT TTTCGAAACT TCCACATGAA AATGATCTCG AAACCGACAC AGACCAGCTT CCCAGTTCCC CGACAGAACT CGAGAATTAT CAATATCTGT GAAAGTAGCT TGATCTCCAT
ACTATACGTC GATTTGTTTG TACAGGTGGA AGAATTCATT CCTAACCATA ATGATTCGAT GGCGTTGGTG CTTTCTCGTT TTGAATCTGT TGGCATCGAT GCTGAAGGAA CAGTCGCTCT
CCTTGGTCTG GTTTATTTAA CTGGACCCGG GTATCCCAGA CGATGTTGCT GTTCCGTAAT AGAAAGATCG CTTCATGCAT CATTTGATAT AATCTCGTAT GATGTATATC GGTTAGGGTT
TATCTTGTTC ATTGTTCTTA ACGCATGATT TCTATCCAAT ATTGAAGTGG ATTGTAGTAA TAGAAAGGAG CTCATTCGGT TGGTCGAGTT CATTGCGTCA ACCTATACGA CAGACTCTAC
CCAACCGTGG ACCCAACCTT AGACTCCGAC TACGCCGAAT ACCTGAAAGG CCGGTGCCCG ATGCCAGACC CAAACCCGGA GAAGGTGCGG TACTCGAGGA ACGACAGAGA GACTCCGATG
GTGCTGGACA ACATGTACTA CAAGCACCTG TTGGCTCACA AGGGACTGTT GCTGGTAGAT CAGCAGTTGG CTTCAGATCC AACAACCGCT CCCTTCGTGG AGAAGATGGC TGCCGACAAC
GGCTACTTCC AGGACCAGTT CGCGAGGGCC ATGCTCAATG CAGTCTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCACCG GAAGCTTCCG TCATTACGGC TTAGGCTTTG TCCTTCTGTC ATTGCTCCTC CAGCTTCTGT CGGTTACGTG CATAGGTTCC AGTGAACTTC AGTCGAATTA CTATGCCGAG
AGCTGTCCGA ACGCAGAAGA AATCATCAAA CAAGAAGTCG CCAAGCTCTA CGATGAACAT GGCAATACCG CCATCTCCTG GATTCGCAAT CTCTTTCATG ACTGCATGGT CCAATCCTGC
GATGCCTCGC TCCTGCTAGA ATCAAAGCAC GGAAACGGGA TCGTGTCGGA GCAGGCATCT TCAAGGAGCT TCGGGATGAG GAATTTCAAG TACGTGACCA AGATCAAGGA GGCTCTAGAG
AAGGAATGCC CCGCGACGGT CTCTTGCGCC GACATCATCG CCCTCTCCGC GAGAGATGGC ACCGTTCTCG TGGAAGAATT CATTCCTAAC CATAATGATT CGATGGCGTT GGTGCTTTCT
CGTTTTGAAT CTGTTGGCAT CGATGCTGAA GGAACAGTCG CTCTCCTTGG AGCTCATTCG GTTGGTCGAG TTCATTGCGT CAACCTATAC GACAGACTCT ACCCAACCGT GGACCCAACC
TTAGACTCCG ACTACGCCGA ATACCTGAAA GGCCGGTGCC CGATGCCAGA CCCAAACCCG GAGAAGGTGC GGTACTCGAG GAACGACAGA GAGACTCCGA TGGTGCTGGA CAACATGTAC
TACAAGCACC TGTTGGCTCA CAAGGGACTG TTGCTGGTAG ATCAGCAGTT GGCTTCAGAT CCAACAACCG CTCCCTTCGT GGAGAAGATG GCTGCCGACA ACGGCTACTT CCAGGACCAG
TTCGCGAGGG CCATGCTCAA TGCAGTCTAA
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Retrieve as FASTA
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