Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
236 |
| PWM (Da): |
25956.18 |
|
| PI (pH):
| 9.29 |
|
Sequence 286
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
KFTRPNFSVRRYDIIDEAKKIFKATCLSTVPYANMVMLATQDSVLLVGGLLAGGPSYNVPMRRRDGLVSYPNEVNLPRATFSISEATQAFMTKGFFTFTVTGTLLDAHSVGAAHCSLFQDRLSNFQGTWSSGSNDGLELGHEAEGHLQELNKQRPYRVFGPEHVVHGG*LVCKQIMQKKGVLRID*ELTIPAPASFLGSCQMRDESFACAMVRLGNIQVPTGNAKEIRRNCRIFNKPK |
Retrieve as FASTA
|
|
| Remarks |
Pseudogene from NGS. 3' and PS are missing due to NNNN. Stops in frame. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AAATTCACCAGGCCAAACTTCTCTGTACGACGATACGACATCATCGACGAAGCGAAGAAGATTTTCAAAGCTACGTGCCTTTCGACTGTCCCTTATGCTAACATGGTCATGCTCGCAACT
CAAGACTCTGTATTGCTCGTCGGTAAACCTATCAAATTGGGTTTAAGACCCNNNNNNNNNNNNNNNNNAAATAAATAGGTCATATATGGGTCATTTCAATTTTGTAGAGCCTTCCTTAAA
TGTGTTTAAAATTTTAAAGGTTAAAATAAATGGATCTAAATGGGTTGAGTTTATGACCAATTTCCGACCAAAGGCTCACATACACACTCTCTCCTCTTTGGCCTTACAAAATTATTTTTT
AGAAAAATCAGATTATAATTATAATTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCTTTCTTCTTCCTTCTTCCATCTTCCTTCGATTATATTGACTGACCAGGTGATGGACAA
GTTACCGGACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTATTTTCTTGGAAAACATTTTCCAAGAAACAAATGTAACCTCAATTATTTAAAAAAATTATAAAAAATGTCCATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAAATTTACATTATAATAAATGGGTCATAAAGG
GGTTAAATGAGTCAATATGAGTCGGACCATTTATGATCCAATCCAAACCCGACTTAAGTTACCGATTTAACAGGTTTACTTGCCGGAGGCCCTAGCTATAATGTCCCTATGAGAAGGCGA
GACGGTCTGGTTTCATACCCGAACGAAGTGAATTTGCCGAGAGCCACATTCTCGATATCTGAGGCGACACAAGCTTTCATGACAAAAGGGTTTTTTACGTTCACCGTAACGGGGACTCTT
TTGGACGCCCACTCCGTTGGAGCCGCTCACTGCAGCTTGTTCCAAGACCGCCTTTCGAATTTCCAAGGCACCTGGAGCTCTGGATCCAACGATGGACTAGAGCTTGGTCACGAAGCTGAA
GGGCATTTGCAGGAACTCAACAAGCAACGACCCTACCGCGTTTTTGGACCAGAGCACGTCGTTCATGGCGGATAACTCGTCTGCAAACAAATTATGCAAAAGAAAGGGGTGTTACGAATC
GACTAGGAGCTCACAATTCCTGCGCCAGCATCGTTTCTCGGTTCATGTCAGATGCGAGATGAGAGCTTTGCGTGTGCGATGGTGAGGCTCGGAAATATTCAAGTTCCCACTGGGAATGCT
AAAGAAATCAGGAGGAATTGCAGGATTTTCAATAAACCCAAG |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AAATTCACCAGGCCAAACTTCTCTGTACGACGATACGACATCATCGACGAAGCGAAGAAGATTTTCAAAGCTACGTGCCTTTCGACTGTCCCTTATGCTAACATGGTCATGCTCGCAACT
CAAGACTCTGTATTGCTCGTCGGTGGTTTACTTGCCGGAGGCCCTAGCTATAATGTCCCTATGAGAAGGCGAGACGGTCTGGTTTCATACCCGAACGAAGTGAATTTGCCGAGAGCCACA
TTCTCGATATCTGAGGCGACACAAGCTTTCATGACAAAAGGGTTTTTTACGTTCACCGTAACGGGGACTCTTTTGGACGCCCACTCCGTTGGAGCCGCTCACTGCAGCTTGTTCCAAGAC
CGCCTTTCGAATTTCCAAGGCACCTGGAGCTCTGGATCCAACGATGGACTAGAGCTTGGTCACGAAGCTGAAGGGCATTTGCAGGAACTCAACAAGCAACGACCCTACCGCGTTTTTGGA
CCAGAGCACGTCGTTCATGGCGGATAACTCGTCTGCAAACAAATTATGCAAAAGAAAGGGGTGTTACGAATCGACTAGGAGCTCACAATTCCTGCGCCAGCATCGTTTCTCGGTTCATGT
CAGATGCGAGATGAGAGCTTTGCGTGTGCGATGGTGAGGCTCGGAAATATTCAAGTTCCCACTGGGAATGCTAAAGAAATCAGGAGGAATTGCAGGATTTTCAATAAACCCAAG |
Retrieve as FASTA
|
|
