Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
329 (310) |
PWM (Da): |
35761 (33555.8) |
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PI (pH): |
7.98 (7.97) |
Peptide Signal: |
cut: 20 range:20-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTPFHLLLLF LVFFNIATSS ESKLTLDYYK KTCPGLQQTI RQVITDKQIA SSTTAAATLR LFFHDCMVNG CDGSILVSSN AFNTAERDAD INLSLPGDGF EVVTRAKTAL ELECPDIVSC
ADILALAARD LVTMVGGPYY DVRLGRxxxx xxKASEAEAA MPKPTMPLSQ IIKIFEARGL SVQEMVALTG AHTIGFTHCK EFSHRLYNFS KKSDYDPTIY PKYAEGLRKL CENYTKDPTM
SAFNDVMTPN KFDNMYYKNL QKGLGLLASD QAMAVDGRTK PYVDLYAGNQ TAFFQAFARA IEKVSVYQVK TGRKGEVRHR CDAFNSLQT
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Retrieve as FASTA
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Remarks |
Complete sequence from NGS. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACGCCCT TTCACCTCCT CCTCCTCTTC CTTGTCTTCT TCAACATCGC AACCTCCTCG GAATCGAAGC TCACCCTCGA CTACTACAAG AAGACATGCC CCGGCCTCCA ACAAACCATC
CGACAAGTCA TCACCGACAA GCAGATCGCC TCCTCCACCA CCGCGGCCGC CACCCTCCGC CTCTTCTTCC ATGATTGCAT GGTAATTGTA GTGAATGAAT GTCCCATTAT GTTTTAGGTA
CACAAATTCT AATTTGCGAA ATCCGCGTTG ACGAGTGTAT ATCGGTTCGA CTGCGGTAGT ATCATGTCGG GCTACGTGTT AAGGTTTTCC AAGCCTTCCC GTCCAATTTA GATTCATCTT
GATTGAGGGA CTAGATTGAT GCTTTGCCAA CGTAACGATG CATGGAGAAA AGGATCTCGA CAGCATTATG CACAAAATGC AACTATCAAT ACGTCGCGGG AAATTTGTAC TAAATACAAA
ATAAGGGATC TTGAAAAATA TTAGGATGTC TTTCTGTAGA ATACGAGACT CGATCTGCAA GTTATTGATG YATCGATGAG AAGTATTTTG ATTTGGAGTT AGCCCTAACG GTGTTTATAT
TCGATTGGTA TTGAACTCTG ATGAAACTGA ATATCCCAAC AGGTAAATGG TTGCGACGGC TCCATCCTCG TCTCCTCCAA CGCGTTCAAC ACTGCKGAAC GCGATGCCGA CATCAACCTC
TCCCTCCCCG GCGATGGTTT CGAAGTCGTC ACCCGTGCCA AAACCGCTCT CGAGCTCGAA TGCCCCGACA TTGTGTCGTG TGCGGATATC CTCGCCCTCG CTGCCCGCGA CCTCGTGACC
ATGGTCGGTG GCCCCTACTA CGACGTCCGC TTGGGCCGAA nnnnnnnnnn nnnnnnGAAA GCATCCGAAG CCGAGGCTGC CATGCCGAAG CCGACCATGC CCCTGAGTCA GATCATCAAA
ATCTTCGAGG CGCGAGGGCT CAGCGTGCAA GAGATGGTAG CTCTGACCGG GGCGCACACG ATCGGCTTCA CGCACTGCAA GGAGTTCAGC CACAGGCTGT ACAATTTCAG CAAGAAATCG
GACTACGACC CAACGATCTA CCCCAAGTAC GCGGAAGGGC TGAGGAAGCT CTGCGAGAAC TACACCAAGG ACCCCACGAT GTCGGCGTTC AACGACGTGA TGACGCCGAA CAAGTTCGAC
AACATGTACT ACAAGAACCT CCAGAAAGGA CTGGGGCTGC TGGCCTCAGA CCAGGCGATG GCGGTGGACG GGAGGACGAA GCCGTACGTG GACCTGTATG CGGGGAACCA GACGGCCTTC
TTCCAGGCGT TCGCCCGAGC CATCGAGAAG GTGAGCGTGT ATCAGGTGAA GACGGGGAGG AAGGGAGAGG TGAGGCACAG GTGCGACGCC TTCAACTCCC TCCAGACTTG A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACGCCCT TTCACCTCCT CCTCCTCTTC CTTGTCTTCT TCAACATCGC AACCTCCTCG GAATCGAAGC TCACCCTCGA CTACTACAAG AAGACATGCC CCGGCCTCCA ACAAACCATC
CGACAAGTCA TCACCGACAA GCAGATCGCC TCCTCCACCA CCGCGGCCGC CACCCTCCGC CTCTTCTTCC ATGATTGCAT GGTAAATGGT TGCGACGGCT CCATCCTCGT CTCCTCCAAC
GCGTTCAACA CTGCCGAACG CGATGCCGAC ATCAACCTCT CCCTCCCCGG CGATGGTTTC GAAGTCGTCA CCCGTGCCAA AACCGCTCTC GAGCTCGAAT GCCCCGACAT TGTGTCGTGT
GCGGATATCC TCGCCCTCGC TGCCCGCGAC CTCGTGACCA TGGTCGCATC CGAAGCCGAG GCTGCCATGC CGAAGCCGAC CATGCCCCTG AGTCAGATCA TCAAAATCTT CGAGGCGCGA
GGGCTCAGCG TGCAAGAGAT GGTAGCTCTG ACCGGGGCGC ACACGATCGG CTTCACGCAC TGCAAGGAGT TCAGCCACAG GCTGTACAAT TTCAGCAAGA AATCGGACTA CGACCCAACG
ATCTACCCCA AGTACGCGGA AGGGCTGAGG AAGCTCTGCG AGAACTACAC CAAGGACCCC ACGATGTCGG CGTTCAACGA CGTGATGACG CCGAACAAGT TCGACAACAT GTACTACAAG
AACCTCCAGA AAGGACTGGG GCTGCTGGCC TCAGACCAGG CGATGGCGGT GGACGGGAGG ACGAAGCCGT ACGTGGACCT GTATGCGGGG AACCAGACGG CCTTCTTCCA GGCGTTCGCC
CGAGCCATCG AGAAGGTGAG CGTGTATCAG GTGAAGACGG GGAGGAAGGG AGAGGTGAGG CACAGGTGCG ACGCCTTCAA CTCCCTCCAG ACTTGA
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Retrieve as FASTA
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