Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
268 (241) |
PWM (Da): |
29127.91 (26113.3) |
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PI (pH): |
8.47 (8.71) |
Peptide Signal: |
cut: 28 range:28-268 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MACPKLFLSC LLLQLMFLFL VPEVAHGQGL KVGFYQKTCP NAEAIVKKVM DQVMSVAPSL SGPLLRMHFH DCFVRVSETG ALSYDVETGR RDGNVSSLNE ALNNLVPPNA NITTLKADFA
MKGLSVKDLV VLSGGHTLGT SHCSSFSDRL YNFTGKGDTD PKLDSNYIAR LKLKCKPNDQ TTLVEMDPGS VRTFDIKYFD LIPKRRGLFT SDAALLDDSE TKAYIDLQIK TGGSTFFKDF
GVSMVNMGRI GVLTGTAGEV RKVCAKVN
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Retrieve as FASTA
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Remarks |
Partial sequence from NGS. PS is missing due to NNNN. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTGTC CGAAGCTCTT CTTGTCTTGT TTGTTGCTTC AGTTGATGTT CTTGTTCCTT GTCCCTGAGG TCGCTCATGG TCAGGGTCTC AAAGTAGGGT TTTACCAGAA GACATGCCCA
AATGCAGAGG CCATCGTGAA GAAGGTCATG GATCAAGTCA TGTCCGTCGC CCCGAGTCTC TCTGGCCCTC TCTTGAGGAT GCATTTTCAC GACTGTTTCG TTAGGGTAAG TGAATGAATG
AGTGCACGTA CTTCTCTTCC TACTTGTGCT TGGGAAGAGT ACTATCTTAT GAGCACCTGT ATAnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnGCGGTGCG CATATGCATA TGTCACTTGC
ATTATTTATT CATTCTAATT TTAATGTTCC TCATTTACAT ATGACATCAG TAGAAATCTC GATTTTCACA AATAATCCAT CCTCTCTCAT TGGAAAAAAA ATTCTGCCCA TATGTATCTT
CGGATCTAAT TACTGCTTGT CAAAACCGAG ATTATTTTCA CATCGTGCAT CATGGTTGTC ACTTTAGACC GGAGCACTTT CCTATGATGT GGAAACTGGA CGAAGAGATG GGAACGTCTC
TAGTTTAAAC GAGGCGCTTA ACAACTTAGT ACCACCTAAT GCCAACATTA CAACTCTGAA AGCAGATTTT GCAATGAAGG GCCTCAGTGT GAAGGACCTT GTCGTCCTAT CAGGTAACAC
TTAATCTTCA ATTGCTTCAT ATGCTTTnnn nnTTATTTTG TGGAAATTGA CATAGATTAA TAGGAAGAAA CTATAATTTG AGCACGAGAT TCATAAACAG TCTGCACTGC AAGGTGGCCA
CACCCTTGGA ACTTCACACT GCTCTTCCTT CTCCGACCGC CTCTACAACT TCACCGGAAA GGGCGACACC GACCCCAAGC TCGACTCTAA CTACATAGCA AGACTAAAGC TCAAGTGCAA
GCCGAATGAC CAAACCACCC TCGTTGAGAT GGACCCAGGA AGCGTGAGGA CGTTCGACAT CAAATACTTC GATCTGATCC CGAAGAGAAG GGGACTCTTC ACTTCGGACG CTGCACTTCT
TGATGATAGC GAAACCAAGG CGTACATTGA CCTCCAGATC AAGACCGGTG GATCCACCTT CTTCAAGGAC TTTGGAGTGT CAATGGTGAA CATGGGTCGG ATCGGCGTGC TCACCGGAAC
GGCTGGTGAA GTCAGGAAAG TGTGTGCAAA GGTTAAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTGTC CGAAGCTCTT CTTGTCTTGT TTGTTGCTTC AGTTGATGTT CTTGTTCCTT GTCCCTGAGG TCGCTCATGG TCAGGGTCTC AAAGTAGGGT TTTACCAGAA GACATGCCCA
AATGCAGAGG CCATCGTGAA GAAGGTCATG GATCAAGTCA TGTCCGTCGC CCCGAGTCTC TCTGGCCCTC TCTTGAGGAT GCATTTTCAC GACTGTTTCG TTAGGGTAAG TGAAACCGGA
GCACTTTCCT ATGATGTGGA AACTGGACGA AGAGATGGGA ACGTCTCTAG TTTAAACGAG GCGCTTAACA ACTTAGTACC ACCTAATGCC AACATTACAA CTCTGAAAGC AGATTTTGCA
ATGAAGGGCC TCAGTGTGAA GGACCTTGTC GTCCTATCAG GTGGCCACAC CCTTGGAACT TCACACTGCT CTTCCTTCTC CGACCGCCTC TACAACTTCA CCGGAAAGGG CGACACCGAC
CCCAAGCTCG ACTCTAACTA CATAGCAAGA CTAAAGCTCA AGTGCAAGCC GAATGACCAA ACCACCCTCG TTGAGATGGA CCCAGGAAGC GTGAGGACGT TCGACATCAA ATACTTCGAT
CTGATCCCGA AGAGAAGGGG ACTCTTCACT TCGGACGCTG CACTTCTTGA TGATAGCGAA ACCAAGGCGT ACATTGACCT CCAGATCAAG ACCGGTGGAT CCACCTTCTT CAAGGACTTT
GGAGTGTCAA TGGTGAACAT GGGTCGGATC GGCGTGCTCA CCGGAACGGC TGGTGAAGTC AGGAAAGTGT GTGCAAAGGT TAAT
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Retrieve as FASTA
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