Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
271 |
PWM (Da): |
28992.47 |
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PI (pH):
| 8.2 |
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Sequence 314
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSRLIFYHVGLHRL*MSYSILGDSSTSIQAALSVKLWSSRGSKRG*NKSSMACQQKMLMISRFEQGCDASLLLDDTEGFTGEKTAGGPTWTVQLGRRDSTTASLKDANSDVPLGIADLSDLISLFSKKGLSAKEMVALSGAGTHTIGQARCFVFRIRIYNEKNIDPAYAASLRQNCPSAGGDANLVPLEDGDVDGKVFNNDYFKNLVSMKGLLHSDQQLFNNGSTDADVKAYSLDSASFFADLANALVKMGNLSPLTGTDGQVRANCRKVNGS |
Retrieve as FASTA
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Remarks |
Pseudogene from NGS. PS are missing due to NNNN. Stop in frame. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCGCGACTAATTTTTTATCATGTCGGTCTTCATAGATTATGAATGTCATATTCAATTCTAGGCGATTCTTCTACTTCCATCCAAGCTGCTTTATCTGTCAAACTTTGGTCTAGCAGA GGGAGCAAACGAGGTTGAAACAAAAGCTCAATGGCTTGTCAACAAAAAATGCTAATGATATCGAGGTTTGAACAGGGTTGTGACGCGTCTCTATTGTTGGACGACACCGAAGGATTCACC GGCGAGAAGACGGCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGATGCCTT TGCTACGTGTAGTCTTATATCCCTTTTTCGATCATTAAGACAGAAGGCGATTGTGTTCAGATCGATTATCCTAACCGGGGATCATGCAAAAAATTTCAGCTGGGGACCCACGTGGACCGT ACAGTTAGGCAGGAGAGATTCAACCACGGCAAGTTTGAAAGATGCAAACAGCGATGTGCCTTTGGGAATCGCGGACCTTAGCGATCTCATATCTCTCTTCTCTAAGAAGGGCTTATCTGC CAAAGAAATGGTCGCCCTCTCAGGTGTTTCATCTAAGAGAGAAGTGTCATTCTTTTGGTCTTTGCACTTTGGAAAGGTTTTCTTTAATTGTCGTTGGGAGAAAATCGCCTGACCACGATC CACCGTCGTATATGCGCTTTTGTACCGCAGGTACTCACACGATAGGCCAAGCGAGGTGCTTCGTGTTCCGCATTCGCATCTACAATGAGAAGAACATCGACCCCGCGTACGCCGCGTCGC TGAGGCAGAACTGTCCCAGCGCAGGCGGGGATGCTAATCTCGTGCCGCTCGAGGATGGCGACGTCGACGGCAAAGTGTTCAACAACGACTACTTCAAGAACCTAGTGAGCATGAAGGGCC TCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCACTGACGCGGATGTGAAGGCCTACAGCCTCGACTCGGCATCCTTCTTCGCCGATCTGGCCAATGCCCTGGTGAAGATGGGGA ACCTCAGCCCCCTCACGGGAACGGACGGGCAAGTTAGGGCCAATTGCAGGAAGGTTAATGGATCT |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCGCGACTAATTTTTTATCATGTCGGTCTTCATAGATTATGAATGTCATATTCAATTCTAGGCGATTCTTCTACTTCCATCCAAGCTGCTTTATCTGTCAAACTTTGGTCTAGCAGA GGGAGCAAACGAGGTTGAAACAAAAGCTCAATGGCTTGTCAACAAAAAATGCTAATGATATCGAGGTTTGAACAGGGTTGTGACGCGTCTCTATTGTTGGACGACACCGAAGGATTCACC GGCGAGAAGACGGCAGGNAGATGCCTTTGCTACGTGTAGTCTTATATCCCTTTTTCGACCACGGCAAGTTTGAAAGATGCAAACAGCGATGTGCCTTTGGGAATCGCGGACCTTAGCGAT CTCATATCTCTCTTCTCTAAGAAGGGCTTATCTGCCAAAGAAATGGTCGCCCTCTCAGGTGTTTCATCTAAGAGAGAAGTGTCATTCTTTTGGTCTTTGTTCCGCATTCGCATCTACAAT GAGAAGAACATCGACCCCGCGTACGCCGCGTCGCTGAGGCAGAACTGTCCCAGCGCAGGCGGGGATGCTAATCTCGTGCCGCTCGAGGATGGCGACGTCGACGGCAAAGTGTTCAACAAC GACTACTTCAAGAACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCACTGACGCGGATGTGAAGGCCTACAGCCTCGACTCGGCATCCTTCTTC GCCGATCTGGCCAATGCCCTGGTGAAGATGGGGAACCTCAGCCCCCTCACGGGAACGGACGGGCAAGTTAGGGCCAATTGCAGGAAGGTTAATGGATCT |
Retrieve as FASTA
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