Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
338 (312) |
PWM (Da): |
36255.75 (33537.3) |
Transmb domain: |
i119-141o178-200i220-242o257-279i286-308o318-335i342-364o |
PI (pH): |
9.95 (9.85) |
Peptide Signal: |
cut: 27 range:27-338 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVASMFRGLA WAFILVLADR VASAAATKPC PTSSKFTVRF YKYTCPAAES IIKQTVYGAV AKNPGMAAGL LRLHFHDCFV RGCDASVLLK STPKNPAERD HPANNPSLRG FEIIDQAKAR
LEAVCPKTVS CADIVAFAAR DSIFKTGGIY YDVPAGRRDG RISRLPEVTQ NLPPPNFNAQ QLISNFARKG LSADEMVTLS GAHSIGISHC SSFSSRLYAF NTTLAQDPTL DPAFASLLKT
KCPPPSNATR ADPTVPLDSI TPNALDNKYY LQLLKLRGVL ATDETLYKSP STSRMVVSNA VNGAAWRxKF AKAMVKMGSL DVITGKQGEI RKVCSVVN
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Retrieve as FASTA
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Remarks |
Complete sequence from NGS. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGGCTT CGATGTTCCG GGGTCTCGCA TGGGCTTTTA TCCTAGTTCT AGCTGACAGA GTCGCGTCTG CGGCGGCTAC GAAGCCGTGC CCGACATCAT CCAAGTTCAC GGTCAGGTTC
TACAAGTACA CCTGTCCAGC TGCGGAGTCT ATCATCAAGC AGACTGTGTA TGGAGCCGTC GCCAAAAATC CGGGAATGGC GGCCGGACTC CTCCGCCTAC ATTTCCACGA TTGCTTTGTT
AGGGTACGTG AAGCATCTTT AGCTCCTTTT GACAAGTCCT TTAATTTATA AGCTCGTTTC CCTATACATA TACGTGTGCA TGGCCGTCCG CAAACGGACT TCATGACACA TAATACTTTG
TCAATCACTA TCCATTGAAA GTTACAGAAT TGGTCAACGC CTCAnnnnTG ACACGATTGA ATGGAGCGTA AGTGTATTTT CATGTTAAAA GTTACGTACC AACTGCACCG GATCGGGTCA
TCTGTATAGG CTAAAAGTTG GACTTTAACA AGGTCATTGA GGTTGTAGGG TATTCCGTGC GCTTCAAAGA TGGCAAGGCC TCTAAACTCA TGCCCTTAGA TTATAAAATG AAAGTCACAT
AATCAAATAC AAGACTTTGT TGAGTAAATT TTACCTGCAA AGTTCTTAAA ATAAGACATT TGGTATGGCA TATTGTTTCT CTTTCTAACC ATTGAAATTT GATTAGGGTT GCGATGCGTC
GGTGCTCTTG AAATCGACTC CTAAAAACCC GGCGGAAAGA GACCATCCGG CCAATAACCC TAGCTTGAGA GGCTTCGAGA TCATCGATCA GGCTAAGGCC CGACTCGAGG CTGTGTGTCC
CAAGACGGTC TCGTGCGCCG ATATCGTCGC TTTTGCGGCC CGTGACAGCA TTTTCAAAAC CGGGGGCATA TACTATGACG TCCCCGCCGG CCGCCGTGAT GGCCGCATCT CTCGCCTTCC
CGAAGTGACC CAAAACCTCC CGCCACCAAA CTTCAACGCC CAACAGTTGA TCTCTAATTT CGCTAGGAAA GGGCTGTCGG CGGATGAGAT GGTGACCCTC TCGGGAGCGC ACTCCATCGG
CATCTCGCAC TGCTCGTCCT TCTCGTCCAG GCTCTACGCG TTCAACACCA CGCTCGCCCA AGATCCTACG TTGGATCCGG CGTTTGCCTC CTTGTTGAAG ACCAAATGCC CACCCCCAAG
CAACGCGACA CGAGCAGACC CGACGGTGCC ACTCGACAGC ATCACGCCCA ACGCTCTGGA CAACAAGTAC TACCTCCAGC TGCTGAAGCT CCGCGGCGTG TTGGCTACGG ATGAGACGCT
GTACAAGAGT CCCTCGACTT CCCGGATGGT CGTGAGCAAC GCAGTGAACG GCGCTGCCTG GAGGGYGAAG TTCGCCAAGG CAATGGTGAA GATGGGCTCG CTCGACGTGA TCACCGGCAA
ACAGGGAGAG ATCAGGAAGG TGTGCAGCGT GGTGAACTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGGCTT CGATGTTCCG GGGTCTCGCA TGGGCTTTTA TCCTAGTTCT AGCTGACAGA GTCGCGTCTG CGGCGGCTAC GAAGCCGTGC CCGACATCAT CCAAGTTCAC GGTCAGGTTC
TACAAGTACA CCTGTCCAGC TGCGGAGTCT ATCATCAAGC AGACTGTGTA TGGAGCCGTC GCCAAAAATC CGGGAATGGC GGCCGGACTC CTCCGCCTAC ATTTCCACGA TTGCTTTGTT
AGGGGTTGCG ATGCGTCGGT GCTCTTGAAA TCGACTCCTA AAAACCCGGC GGAAAGAGAC CATCCGGCCA ATAACCCTAG CTTGAGAGGC TTCGAGATCA TCGATCAGGC TAAGGCCCGA
CTCGAGGCTG TGTGTCCCAA GACGGTCTCG TGCGCCGATA TCGTCGCTTT TGCGGCCCGT GACAGCATTT TCAAAACCGG GGGCATATAC TATGACGTCC CCGCCGGCCG CCGTGATGGC
CGCATCTCTC GCCTTCCCGA AGTGACCCAA AACCTCCCGC CACCAAACTT CAACGCCCAA CAGTTGATCT CTAATTTCGC TAGGAAAGGG CTGTCGGCGG ATGAGATGGT GACCCTCTCG
GGAGCGCACT CCATCGGCAT CTCGCACTGC TCGTCCTTCT CGTCCAGGCT CTACGCGTTC AACACCACGC TCGCCCAAGA TCCTACGTTG GATCCGGCGT TTGCCTCCTT GTTGAAGACC
AAATGCCCAC CCCCAAGCAA CGCGACACGA GCAGACCCGA CGGTGCCACT CGACAGCATC ACGCCCAACG CTCTGGACAA CAAGTACTAC CTCCAGCTGC TGAAGCTCCG CGGCGTGTTG
GCTACGGATG AGACGCTGTA CAAGAGTCCC TCGACTTCCC GGATGGTCGT GAGCAACGCA GTGAACGGCG CTGCCTGGAG GGCGAAGTTC GCCAAGGCAA TGGTGAAGAT GGGCTCGCTC
GACGTGATCA CCGGCAAACA GGGAGAGATC AGGAAGGTGT GCAGCGTGGT GAACTGA
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Retrieve as FASTA
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